RNA–Protein interactions for RNA: ENSMUST00000017153.3

Sdc4-201, Transcript of Syndecan-4, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Sdc4, Length 2,458 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc4-201ENSMUST00000017153 Sprr2iO70560 76 aa4.44□□□□□ -1.7
Sdc4-201ENSMUST00000017153 Gm38119A0A0A6YX29 146 aa4.4□□□□□ -1.71
Sdc4-201ENSMUST00000017153 Gm11564A2A4L9 201 aa4.4□□□□□ -1.71
Sdc4-201ENSMUST00000017153 Gm11595B1AQA7 289 aa4.4□□□□□ -1.71
Sdc4-201ENSMUST00000017153 Krtap4-8B1AQA8 209 aa4.4□□□□□ -1.71
Sdc4-201ENSMUST00000017153 Mdn1A2ANY6 5589 aaKnown RBP4.38□□□□□ -1.71
Sdc4-201ENSMUST00000017153 Sprr2gO70558 76 aa4.34□□□□□ -1.71
Sdc4-201ENSMUST00000017153 2300003K06RikA2A4M0 262 aa4.29□□□□□ -1.72
Sdc4-201ENSMUST00000017153 Gm11938Q9D3H4 131 aa4.28□□□□□ -1.72
Sdc4-201ENSMUST00000017153 Krtap4-9B1AQA9 244 aa4.25□□□□□ -1.73
Sdc4-201ENSMUST00000017153 Krtap22-2J3QNX6 67 aa4.24□□□□□ -1.73
Sdc4-201ENSMUST00000017153 Lce1eQ9D139 143 aa4.22□□□□□ -1.73
Sdc4-201ENSMUST00000017153 Sprr2dO70555 85 aa4.21□□□□□ -1.74
Sdc4-201ENSMUST00000017153 Fsip2A2ARZ3 6995 aa4.2□□□□□ -1.74
Sdc4-201ENSMUST00000017153 Krtap6-3A0A087WQL6 57 aa4.17□□□□□ -1.74
Sdc4-201ENSMUST00000017153 Sprr2fO70557 76 aa4.16□□□□□ -1.74
Sdc4-201ENSMUST00000017153 Mt4P47945 62 aa4.15□□□□□ -1.75
Sdc4-201ENSMUST00000017153 Krtap4-13Q9D7P3 165 aa4.1□□□□□ -1.75
Sdc4-201ENSMUST00000017153 Lce1a1Q9CQH5 143 aa4.09□□□□□ -1.75
Sdc4-201ENSMUST00000017153 Lce1bQ9D149 137 aa4.05□□□□□ -1.76
Sdc4-201ENSMUST00000017153 Gm10024A0A0A0MQA4 119 aa4.03□□□□□ -1.76
Sdc4-201ENSMUST00000017153 Sprr2kO70562 68 aa4.02□□□□□ -1.77
Sdc4-201ENSMUST00000017153 Lce1lQ9D1G7 135 aa4□□□□□ -1.77
Sdc4-201ENSMUST00000017153 Lce1cQ9D1C5 147 aa3.98□□□□□ -1.77
Sdc4-201ENSMUST00000017153 Krtap19-4Q925H7 84 aa3.89□□□□□ -1.79
Sdc4-201ENSMUST00000017153 Lce3bQ9CQM7 98 aa3.85□□□□□ -1.79
Sdc4-201ENSMUST00000017153 Gm10100J3QK64 120 aa3.85□□□□□ -1.79
Sdc4-201ENSMUST00000017153 Lce1fB9EJP6 147 aa3.83□□□□□ -1.8
Sdc4-201ENSMUST00000017153 Krtap20-2E9Q0A8 60 aa3.82□□□□□ -1.8
Sdc4-201ENSMUST00000017153 Sprr2eO70556 76 aa3.82□□□□□ -1.8
Sdc4-201ENSMUST00000017153 Gm10142J3KMP7 120 aa3.81□□□□□ -1.8
Sdc4-201ENSMUST00000017153 Krtap4-16Q91W93 202 aa3.81□□□□□ -1.8
Sdc4-201ENSMUST00000017153 Gm11568A2A4M2 211 aa3.79□□□□□ -1.8
Sdc4-201ENSMUST00000017153 Syne1Q6ZWR6 8799 aa3.76□□□□□ -1.81
Sdc4-201ENSMUST00000017153 Sprr2hO70559 108 aa3.7□□□□□ -1.82
Sdc4-201ENSMUST00000017153 Lce3cQ91V05 98 aa3.68□□□□□ -1.82
Sdc4-201ENSMUST00000017153 Eppk1Q8R0W0 6548 aa3.66□□□□□ -1.82
Sdc4-201ENSMUST00000017153 Lce3dE9Q8V1 98 aa3.65□□□□□ -1.83
Sdc4-201ENSMUST00000017153 Lce3eF8VQJ0 98 aa3.62□□□□□ -1.83
Sdc4-201ENSMUST00000017153 Lce3fQ6PAI4 98 aa3.62□□□□□ -1.83
Sdc4-201ENSMUST00000017153 Gm11559Q9D3H7 191 aa3.61□□□□□ -1.83
Sdc4-201ENSMUST00000017153 Gm45618A0A1B0GSA0 219 aa3.6□□□□□ -1.83
Sdc4-201ENSMUST00000017153 Krtap9-1Q64526 186 aa3.57□□□□□ -1.84
Sdc4-201ENSMUST00000017153 Lce3aQ497I5 98 aa3.53□□□□□ -1.84
Sdc4-201ENSMUST00000017153 ObscnA2AAJ9 8891 aaKnown RBP3.51□□□□□ -1.85
Sdc4-201ENSMUST00000017153 Gm11639A0A1D5RLM8 5808 aa3.47□□□□□ -1.85
Sdc4-201ENSMUST00000017153 Gm39115A0A1B0GSH7 232 aa3.47□□□□□ -1.85
Sdc4-201ENSMUST00000017153 Lce1kJ3QP15 125 aa3.45□□□□□ -1.86
Sdc4-201ENSMUST00000017153 Mt1P02802 61 aaKnown RBP3.41□□□□□ -1.86
Sdc4-201ENSMUST00000017153 Krtap5-2Q9D5Z7 189 aa3.41□□□□□ -1.86
Sdc4-201ENSMUST00000017153 Gm11554B1AQB2 190 aa3.4□□□□□ -1.87
Sdc4-201ENSMUST00000017153 Macf1Q9QXZ0 7354 aaKnown RBP3.39□□□□□ -1.87
Sdc4-201ENSMUST00000017153 Gm11567Q9D141 195 aa3.35□□□□□ -1.87
Sdc4-201ENSMUST00000017153 Gpr98Q8VHN7 6298 aaKnown RBP3.35□□□□□ -1.87
Sdc4-201ENSMUST00000017153 Kmt2dQ6PDK2 5588 aa3.29□□□□□ -1.88
Sdc4-201ENSMUST00000017153 Muc19Q6PZE0 7524 aa3.27□□□□□ -1.89
Sdc4-201ENSMUST00000017153 Gm4553A0A1B0GSA9 284 aa3.24□□□□□ -1.89
Sdc4-201ENSMUST00000017153 Gm10153A0A1B0GRL1 320 aa3.19□□□□□ -1.9
Sdc4-201ENSMUST00000017153 Gm29735A0A1B0GT06 219 aa3.18□□□□□ -1.9
Sdc4-201ENSMUST00000017153 Gm2431E9Q8S1 172 aa3.15□□□□□ -1.9
Sdc4-201ENSMUST00000017153 Gm45337A0A1B0GS71 263 aa3.13□□□□□ -1.91
Sdc4-201ENSMUST00000017153 Mt3P28184 68 aa3.1□□□□□ -1.91
Sdc4-201ENSMUST00000017153 Gm40460A0A1B0GR10 244 aa3.05□□□□□ -1.92
Sdc4-201ENSMUST00000017153 Gm7579A0A1B0GRJ4 243 aa3.05□□□□□ -1.92
Sdc4-201ENSMUST00000017153 Krtap5-5Q2TA51 241 aa3.05□□□□□ -1.92
Sdc4-201ENSMUST00000017153 Krtap5-4Q62220 223 aa3.05□□□□□ -1.92
Sdc4-201ENSMUST00000017153 Hmcn1D3YXG0 5634 aa3.02□□□□□ -1.93
Sdc4-201ENSMUST00000017153 DstQ91ZU6 7393 aaKnown RBP3.01□□□□□ -1.93
Sdc4-201ENSMUST00000017153 NebE9Q1W3 7152 aa3.01□□□□□ -1.93
Sdc4-201ENSMUST00000017153 Muc16A0A140LJ72 8478 aa2.78□□□□□ -1.96
Sdc4-201ENSMUST00000017153 AhnakE9Q616 5656 aaKnown RBP2.74□□□□□ -1.97
Sdc4-201ENSMUST00000017153 1110025L11RikO09048 78 aa2.63□□□□□ -1.99
Sdc4-201ENSMUST00000017153 Krtap6-5Q925H3 78 aa2.63□□□□□ -1.99
Sdc4-201ENSMUST00000017153 Sprr2bO70554 98 aa2.44□□□□□ -2.02
Sdc4-201ENSMUST00000017153 Krtap5-1Q64507 230 aa2.43□□□□□ -2.02
Sdc4-201ENSMUST00000017153 Gm4559A4IF42 199 aa2.34□□□□□ -2.03
Sdc4-201ENSMUST00000017153 Gm10229O08631 77 aa2.32□□□□□ -2.04
Sdc4-201ENSMUST00000017153 Phgr1Q8K0G7 91 aa2.19□□□□□ -2.06
Sdc4-201ENSMUST00000017153 Krtap21-1Q925H4 128 aa2.17□□□□□ -2.06
Sdc4-201ENSMUST00000017153 Krtap6-2O08884 159 aa1.96□□□□□ -2.1
Retrieved 80 of 22,080 RNA–protein pairs in 82.4 ms