RNA–Protein interactions for RNA: ENSMUST00000004428.13

Clcn5-201, Transcript of H(+)/Cl(-) exchange transporter 5, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Clcn5, Length 8,390 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn5-201ENSMUST00000004428 Lce1gQ9D195 139 aa1.95□□□□□ -2.1
Clcn5-201ENSMUST00000004428 Lce1eQ9D139 143 aa1.95□□□□□ -2.1
Clcn5-201ENSMUST00000004428 SspoQ8CG65 4998 aa1.94□□□□□ -2.1
Clcn5-201ENSMUST00000004428 Mt1P02802 61 aaKnown RBP1.94□□□□□ -2.1
Clcn5-201ENSMUST00000004428 Gm11938Q9D3H4 131 aa1.94□□□□□ -2.1
Clcn5-201ENSMUST00000004428 Lce1fB9EJP6 147 aa1.93□□□□□ -2.1
Clcn5-201ENSMUST00000004428 Lce1cQ9D1C5 147 aa1.93□□□□□ -2.1
Clcn5-201ENSMUST00000004428 Lce1lQ9D1G7 135 aa1.93□□□□□ -2.1
Clcn5-201ENSMUST00000004428 Lce1dQ9D731 133 aa1.93□□□□□ -2.1
Clcn5-201ENSMUST00000004428 Krtap4-2B1AQ85 167 aa1.93□□□□□ -2.1
Clcn5-201ENSMUST00000004428 Eppk1Q8R0W0 6548 aa1.93□□□□□ -2.1
Clcn5-201ENSMUST00000004428 Hmcn2A2AJ76 5100 aa1.92□□□□□ -2.1
Clcn5-201ENSMUST00000004428 Krtap28-13A0A087WQP5 138 aa1.9□□□□□ -2.11
Clcn5-201ENSMUST00000004428 A0A1Y7VJ07 166 aa1.89□□□□□ -2.11
Clcn5-201ENSMUST00000004428 Lce1bQ9D149 137 aa1.88□□□□□ -2.11
Clcn5-201ENSMUST00000004428 Lce1iQ9D6P5 149 aa1.88□□□□□ -2.11
Clcn5-201ENSMUST00000004428 Gm7544A0A1Y7VJ58 118 aa1.86□□□□□ -2.11
Clcn5-201ENSMUST00000004428 Syne2Q6ZWQ0 6874 aaKnown RBP1.84□□□□□ -2.11
Clcn5-201ENSMUST00000004428 Gm38119A0A0A6YX29 146 aa1.84□□□□□ -2.11
Clcn5-201ENSMUST00000004428 Gm11596B1AQB0 205 aa1.84□□□□□ -2.12
Clcn5-201ENSMUST00000004428 Krtap6-3A0A087WQL6 57 aa1.83□□□□□ -2.12
Clcn5-201ENSMUST00000004428 Lce1a2Q9D1K4 149 aa1.83□□□□□ -2.12
Clcn5-201ENSMUST00000004428 Lce1hQ9D6R3 140 aa1.83□□□□□ -2.12
Clcn5-201ENSMUST00000004428 Krtap4-6Q3V4B7 195 aa1.82□□□□□ -2.12
Clcn5-201ENSMUST00000004428 Mt4P47945 62 aa1.79□□□□□ -2.12
Clcn5-201ENSMUST00000004428 Krtap4-1Q3UUY3 169 aa1.79□□□□□ -2.12
Clcn5-201ENSMUST00000004428 Gm11564A2A4L9 201 aa1.78□□□□□ -2.13
Clcn5-201ENSMUST00000004428 Gm11563B1AQ90 168 aa1.78□□□□□ -2.13
Clcn5-201ENSMUST00000004428 Gm11595B1AQA7 289 aa1.78□□□□□ -2.13
Clcn5-201ENSMUST00000004428 Krtap4-8B1AQA8 209 aa1.78□□□□□ -2.13
Clcn5-201ENSMUST00000004428 Krtap4-9B1AQA9 244 aa1.72□□□□□ -2.13
Clcn5-201ENSMUST00000004428 Krtap4-16Q91W93 202 aa1.72□□□□□ -2.13
Clcn5-201ENSMUST00000004428 Krtap4-7Q9D732 168 aa1.7□□□□□ -2.14
Clcn5-201ENSMUST00000004428 Gm11555B1AQ89 175 aa1.69□□□□□ -2.14
Clcn5-201ENSMUST00000004428 2300003K06RikA2A4M0 262 aa1.68□□□□□ -2.14
Clcn5-201ENSMUST00000004428 A0A1Y7VJH8 109 aa1.66□□□□□ -2.14
Clcn5-201ENSMUST00000004428 A030014E15RikA0A1Y7VJV2 120 aa1.65□□□□□ -2.14
Clcn5-201ENSMUST00000004428 Krtap20-2E9Q0A8 60 aa1.63□□□□□ -2.15
Clcn5-201ENSMUST00000004428 Krtap4-13Q9D7P3 165 aa1.63□□□□□ -2.15
Clcn5-201ENSMUST00000004428 Syne1Q6ZWR6 8799 aa1.62□□□□□ -2.15
Clcn5-201ENSMUST00000004428 Lce1kJ3QP15 125 aa1.62□□□□□ -2.15
Clcn5-201ENSMUST00000004428 Gm11639A0A1D5RLM8 5808 aa1.6□□□□□ -2.15
Clcn5-201ENSMUST00000004428 Lce1a1Q9CQH5 143 aa1.59□□□□□ -2.16
Clcn5-201ENSMUST00000004428 Gpr98Q8VHN7 6298 aaKnown RBP1.59□□□□□ -2.16
Clcn5-201ENSMUST00000004428 Kmt2dQ6PDK2 5588 aa1.55□□□□□ -2.16
Clcn5-201ENSMUST00000004428 ObscnA2AAJ9 8891 aaKnown RBP1.53□□□□□ -2.16
Clcn5-201ENSMUST00000004428 Fsip2A2ARZ3 6995 aa1.52□□□□□ -2.17
Clcn5-201ENSMUST00000004428 A0A286YCP9 139 aa1.47□□□□□ -2.17
Clcn5-201ENSMUST00000004428 Hmcn1D3YXG0 5634 aa1.46□□□□□ -2.18
Clcn5-201ENSMUST00000004428 Gm11568A2A4M2 211 aa1.44□□□□□ -2.18
Clcn5-201ENSMUST00000004428 Krtap5-2Q9D5Z7 189 aa1.41□□□□□ -2.18
Clcn5-201ENSMUST00000004428 1110025L11RikO09048 78 aa1.39□□□□□ -2.19
Clcn5-201ENSMUST00000004428 Krtap6-5Q925H3 78 aa1.39□□□□□ -2.19
Clcn5-201ENSMUST00000004428 Gm11554B1AQB2 190 aa1.39□□□□□ -2.19
Clcn5-201ENSMUST00000004428 Gm11559Q9D3H7 191 aa1.39□□□□□ -2.19
Clcn5-201ENSMUST00000004428 AhnakE9Q616 5656 aaKnown RBP1.38□□□□□ -2.19
Clcn5-201ENSMUST00000004428 DstQ91ZU6 7393 aaKnown RBP1.37□□□□□ -2.19
Clcn5-201ENSMUST00000004428 Krtap9-1Q64526 186 aa1.37□□□□□ -2.19
Clcn5-201ENSMUST00000004428 Gm4553A0A1B0GSA9 284 aa1.34□□□□□ -2.19
Clcn5-201ENSMUST00000004428 Gm10229O08631 77 aa1.33□□□□□ -2.2
Clcn5-201ENSMUST00000004428 Gm11567Q9D141 195 aa1.32□□□□□ -2.2
Clcn5-201ENSMUST00000004428 Macf1Q9QXZ0 7354 aaKnown RBP1.31□□□□□ -2.2
Clcn5-201ENSMUST00000004428 Muc16A0A140LJ72 8478 aa1.26□□□□□ -2.21
Clcn5-201ENSMUST00000004428 Gm40460A0A1B0GR10 244 aa1.24□□□□□ -2.21
Clcn5-201ENSMUST00000004428 Gm7579A0A1B0GRJ4 243 aa1.24□□□□□ -2.21
Clcn5-201ENSMUST00000004428 Krtap5-5Q2TA51 241 aa1.24□□□□□ -2.21
Clcn5-201ENSMUST00000004428 Krtap5-4Q62220 223 aa1.24□□□□□ -2.21
Clcn5-201ENSMUST00000004428 Gm45337A0A1B0GS71 263 aa1.24□□□□□ -2.21
Clcn5-201ENSMUST00000004428 Phgr1Q8K0G7 91 aa1.22□□□□□ -2.21
Clcn5-201ENSMUST00000004428 Gm10153A0A1B0GRL1 320 aa1.2□□□□□ -2.22
Clcn5-201ENSMUST00000004428 NebE9Q1W3 7152 aa1.2□□□□□ -2.22
Clcn5-201ENSMUST00000004428 Gm39115A0A1B0GSH7 232 aa1.19□□□□□ -2.22
Clcn5-201ENSMUST00000004428 Gm2431E9Q8S1 172 aa1.18□□□□□ -2.22
Clcn5-201ENSMUST00000004428 Gm45618A0A1B0GSA0 219 aa1.1□□□□□ -2.23
Clcn5-201ENSMUST00000004428 Muc19Q6PZE0 7524 aa1.03□□□□□ -2.24
Clcn5-201ENSMUST00000004428 Krtap6-2O08884 159 aa1.02□□□□□ -2.25
Clcn5-201ENSMUST00000004428 Gm29735A0A1B0GT06 219 aa0.97□□□□□ -2.25
Clcn5-201ENSMUST00000004428 Krtap21-1Q925H4 128 aa0.97□□□□□ -2.25
Clcn5-201ENSMUST00000004428 Gm4559A4IF42 199 aa0.62□□□□□ -2.31
Clcn5-201ENSMUST00000004428 Krtap5-1Q64507 230 aa0.61□□□□□ -2.31
Retrieved 80 of 22,080 RNA–protein pairs in 95.5 ms