RNA–Protein interactions for RNA: ENSMUST00000003599.8

Pcdhgb6-201, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcdhgb6, Length 4,684 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhgb6-201ENSMUST00000003599 Lce1eQ9D139 143 aa4.04□□□□□ -1.76
Pcdhgb6-201ENSMUST00000003599 Gm11564A2A4L9 201 aa4.02□□□□□ -1.77
Pcdhgb6-201ENSMUST00000003599 Gm11563B1AQ90 168 aa4.02□□□□□ -1.77
Pcdhgb6-201ENSMUST00000003599 Gm11595B1AQA7 289 aa4.02□□□□□ -1.77
Pcdhgb6-201ENSMUST00000003599 Krtap4-8B1AQA8 209 aa4.02□□□□□ -1.77
Pcdhgb6-201ENSMUST00000003599 Fsip2A2ARZ3 6995 aa4.02□□□□□ -1.77
Pcdhgb6-201ENSMUST00000003599 Krtap4-9B1AQA9 244 aa4.01□□□□□ -1.77
Pcdhgb6-201ENSMUST00000003599 Krtap17-1A2A5X6 109 aa3.99□□□□□ -1.77
Pcdhgb6-201ENSMUST00000003599 Krtap19-4Q925H7 84 aa3.97□□□□□ -1.77
Pcdhgb6-201ENSMUST00000003599 Hmcn2A2AJ76 5100 aa3.94□□□□□ -1.78
Pcdhgb6-201ENSMUST00000003599 2300003K06RikA2A4M0 262 aa3.92□□□□□ -1.78
Pcdhgb6-201ENSMUST00000003599 Gm10024A0A0A0MQA4 119 aa3.89□□□□□ -1.79
Pcdhgb6-201ENSMUST00000003599 Krtap4-13Q9D7P3 165 aa3.89□□□□□ -1.79
Pcdhgb6-201ENSMUST00000003599 Krtap4-7Q9D732 168 aa3.88□□□□□ -1.79
Pcdhgb6-201ENSMUST00000003599 Syne2Q6ZWQ0 6874 aaKnown RBP3.87□□□□□ -1.79
Pcdhgb6-201ENSMUST00000003599 SspoQ8CG65 4998 aa3.81□□□□□ -1.8
Pcdhgb6-201ENSMUST00000003599 Muc16A0A140LJ72 8478 aa3.73□□□□□ -1.81
Pcdhgb6-201ENSMUST00000003599 Gm11562A0PK51 136 aa3.73□□□□□ -1.81
Pcdhgb6-201ENSMUST00000003599 Lce1kJ3QP15 125 aa3.72□□□□□ -1.81
Pcdhgb6-201ENSMUST00000003599 Macf1Q9QXZ0 7354 aaKnown RBP3.62□□□□□ -1.83
Pcdhgb6-201ENSMUST00000003599 Krtap6-3A0A087WQL6 57 aa3.61□□□□□ -1.83
Pcdhgb6-201ENSMUST00000003599 Gm11938Q9D3H4 131 aa3.61□□□□□ -1.83
Pcdhgb6-201ENSMUST00000003599 Lce1a1Q9CQH5 143 aa3.6□□□□□ -1.83
Pcdhgb6-201ENSMUST00000003599 Krtap31-1Q9D644 177 aa3.55□□□□□ -1.84
Pcdhgb6-201ENSMUST00000003599 Sprr2dO70555 85 aa3.54□□□□□ -1.84
Pcdhgb6-201ENSMUST00000003599 Mt3P28184 68 aa3.48□□□□□ -1.85
Pcdhgb6-201ENSMUST00000003599 Sprr2hO70559 108 aa3.46□□□□□ -1.86
Pcdhgb6-201ENSMUST00000003599 ObscnA2AAJ9 8891 aaKnown RBP3.46□□□□□ -1.86
Pcdhgb6-201ENSMUST00000003599 Gm11554B1AQB2 190 aa3.44□□□□□ -1.86
Pcdhgb6-201ENSMUST00000003599 Krtap20-2E9Q0A8 60 aa3.39□□□□□ -1.87
Pcdhgb6-201ENSMUST00000003599 DstQ91ZU6 7393 aaKnown RBP3.37□□□□□ -1.87
Pcdhgb6-201ENSMUST00000003599 Gm11555B1AQ89 175 aa3.37□□□□□ -1.87
Pcdhgb6-201ENSMUST00000003599 Eppk1Q8R0W0 6548 aa3.3□□□□□ -1.88
Pcdhgb6-201ENSMUST00000003599 Mt1P02802 61 aaKnown RBP3.25□□□□□ -1.89
Pcdhgb6-201ENSMUST00000003599 NebE9Q1W3 7152 aa3.25□□□□□ -1.89
Pcdhgb6-201ENSMUST00000003599 Krtap4-16Q91W93 202 aa3.25□□□□□ -1.89
Pcdhgb6-201ENSMUST00000003599 Krtap31-2Q8CAY5 177 aa3.17□□□□□ -1.9
Pcdhgb6-201ENSMUST00000003599 Kmt2dQ6PDK2 5588 aa3.17□□□□□ -1.9
Pcdhgb6-201ENSMUST00000003599 Sprr2bO70554 98 aa3.14□□□□□ -1.91
Pcdhgb6-201ENSMUST00000003599 Muc19Q6PZE0 7524 aa3.04□□□□□ -1.92
Pcdhgb6-201ENSMUST00000003599 Gpr98Q8VHN7 6298 aaKnown RBP2.89□□□□□ -1.95
Pcdhgb6-201ENSMUST00000003599 Gm11639A0A1D5RLM8 5808 aa2.81□□□□□ -1.96
Pcdhgb6-201ENSMUST00000003599 Gm11559Q9D3H7 191 aa2.8□□□□□ -1.96
Pcdhgb6-201ENSMUST00000003599 Gm11568A2A4M2 211 aa2.76□□□□□ -1.97
Pcdhgb6-201ENSMUST00000003599 Krtap9-1Q64526 186 aa2.76□□□□□ -1.97
Pcdhgb6-201ENSMUST00000003599 A0A1Y7VLE6 161 aa2.72□□□□□ -1.97
Pcdhgb6-201ENSMUST00000003599 1110025L11RikO09048 78 aa2.65□□□□□ -1.99
Pcdhgb6-201ENSMUST00000003599 Krtap6-5Q925H3 78 aa2.65□□□□□ -1.99
Pcdhgb6-201ENSMUST00000003599 Hmcn1D3YXG0 5634 aa2.64□□□□□ -1.99
Pcdhgb6-201ENSMUST00000003599 Krtap5-2Q9D5Z7 189 aa2.57□□□□□ -2
Pcdhgb6-201ENSMUST00000003599 A0A1Y7VJH8 109 aa2.52□□□□□ -2.01
Pcdhgb6-201ENSMUST00000003599 A030003K21RikA0A1Y7VIM3 128 aa2.48□□□□□ -2.01
Pcdhgb6-201ENSMUST00000003599 Gm10229O08631 77 aa2.48□□□□□ -2.01
Pcdhgb6-201ENSMUST00000003599 Gm4553A0A1B0GSA9 284 aa2.45□□□□□ -2.02
Pcdhgb6-201ENSMUST00000003599 Krtap28-10A0A1Y7VP58 119 aa2.44□□□□□ -2.02
Pcdhgb6-201ENSMUST00000003599 Krtap28-13A0A087WQP5 138 aa2.35□□□□□ -2.03
Pcdhgb6-201ENSMUST00000003599 Gm6217A0A1Y7VJK9 128 aa2.34□□□□□ -2.04
Pcdhgb6-201ENSMUST00000003599 A030005K14RikA0A1Y7VNY1 122 aa2.32□□□□□ -2.04
Pcdhgb6-201ENSMUST00000003599 AhnakE9Q616 5656 aaKnown RBP2.31□□□□□ -2.04
Pcdhgb6-201ENSMUST00000003599 Gm2431E9Q8S1 172 aa2.31□□□□□ -2.04
Pcdhgb6-201ENSMUST00000003599 A030005L19RikA0A1Y7VIU2 113 aa2.3□□□□□ -2.04
Pcdhgb6-201ENSMUST00000003599 Gm7544A0A1Y7VJ58 118 aa2.26□□□□□ -2.05
Pcdhgb6-201ENSMUST00000003599 A0A1Y7VJ07 166 aa2.24□□□□□ -2.05
Pcdhgb6-201ENSMUST00000003599 Gm10153A0A1B0GRL1 320 aa2.19□□□□□ -2.06
Pcdhgb6-201ENSMUST00000003599 Phgr1Q8K0G7 91 aa2.17□□□□□ -2.06
Pcdhgb6-201ENSMUST00000003599 Gm45337A0A1B0GS71 263 aa2.15□□□□□ -2.07
Pcdhgb6-201ENSMUST00000003599 Gm40460A0A1B0GR10 244 aa2.11□□□□□ -2.07
Pcdhgb6-201ENSMUST00000003599 Gm7579A0A1B0GRJ4 243 aa2.11□□□□□ -2.07
Pcdhgb6-201ENSMUST00000003599 Krtap5-5Q2TA51 241 aa2.11□□□□□ -2.07
Pcdhgb6-201ENSMUST00000003599 Krtap5-4Q62220 223 aa2.11□□□□□ -2.07
Pcdhgb6-201ENSMUST00000003599 Krtap6-2O08884 159 aa2.05□□□□□ -2.08
Pcdhgb6-201ENSMUST00000003599 A030014E15RikA0A1Y7VJV2 120 aa2.03□□□□□ -2.08
Pcdhgb6-201ENSMUST00000003599 Gm39115A0A1B0GSH7 232 aa1.99□□□□□ -2.09
Pcdhgb6-201ENSMUST00000003599 Krtap21-1Q925H4 128 aa1.91□□□□□ -2.1
Pcdhgb6-201ENSMUST00000003599 Gm11567Q9D141 195 aa1.91□□□□□ -2.1
Pcdhgb6-201ENSMUST00000003599 Gm45618A0A1B0GSA0 219 aa1.74□□□□□ -2.13
Pcdhgb6-201ENSMUST00000003599 A0A286YCP9 139 aa1.67□□□□□ -2.14
Pcdhgb6-201ENSMUST00000003599 Gm29735A0A1B0GT06 219 aa1.57□□□□□ -2.16
Pcdhgb6-201ENSMUST00000003599 Krtap5-1Q64507 230 aa1.27□□□□□ -2.21
Pcdhgb6-201ENSMUST00000003599 Gm4559A4IF42 199 aa0.82□□□□□ -2.28
Retrieved 80 of 22,080 RNA–protein pairs in 90.6 ms