RNA–Protein interactions for RNA: YNL293W

MSB3, Transcript of Rab GTPase-activating protein, yeast

Gene MSB3, Length 1,902 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
MSB3	YNL293W	SEC18	P18759	758 aa	Known RBP	7.23	□□□□□ -1.25
MSB3	YNL293W	FRD1	P32614	470 aa	Known RBP	7.23	□□□□□ -1.25
MSB3	YNL293W	MRPL7	P36519	292 aa		7.23	□□□□□ -1.25
MSB3	YNL293W	BMT2	P38278	337 aa		7.23	□□□□□ -1.25
MSB3	YNL293W	YHL050C	P38721	697 aa		7.23	□□□□□ -1.25
MSB3	YNL293W	YHL008C	P38750	627 aa		7.23	□□□□□ -1.25
MSB3	YNL293W	YER184C	P39961	794 aa		7.23	□□□□□ -1.25
MSB3	YNL293W	DIM1	P41819	318 aa	Known RBP	7.23	□□□□□ -1.25
MSB3	YNL293W	DIE2	P50076	525 aa		7.23	□□□□□ -1.25
MSB3	YNL293W	ROM1	P53046	1155 aa		7.23	□□□□□ -1.25
MSB3	YNL293W	RAI1	P53063	387 aa	Known RBP	7.23	□□□□□ -1.25
MSB3	YNL293W	RNH70	P53331	553 aa		7.23	□□□□□ -1.25
MSB3	YNL293W	SED5	Q01590	340 aa		7.23	□□□□□ -1.25
MSB3	YNL293W	OSH6	Q02201	448 aa		7.23	□□□□□ -1.25
MSB3	YNL293W	MUK1	Q02866	612 aa		7.23	□□□□□ -1.25
MSB3	YNL293W	YPR091C	Q06833	770 aa		7.23	□□□□□ -1.25
MSB3	YNL293W	OSW2	Q12202	724 aa		7.23	□□□□□ -1.25
MSB3	YNL293W	YEL077C	Q3E7X8	1277 aa		7.23	□□□□□ -1.25
MSB3	YNL293W	ATP4	P05626	244 aa		7.22	□□□□□ -1.25
MSB3	YNL293W	PRI2	P20457	528 aa		7.22	□□□□□ -1.25
MSB3	YNL293W	TRX2	P22803	104 aa	Known RBP	7.22	□□□□□ -1.25
MSB3	YNL293W	BUD31	P25337	157 aa	Predicted RBP	7.22	□□□□□ -1.25
MSB3	YNL293W	LYP1	P32487	611 aa		7.22	□□□□□ -1.25
MSB3	YNL293W	IMP3	P32899	183 aa	Predicted RBP	7.22	□□□□□ -1.25
MSB3	YNL293W	SEA4	P38164	1038 aa		7.22	□□□□□ -1.25
MSB3	YNL293W	YBR138C	P38277	524 aa		7.22	□□□□□ -1.25
MSB3	YNL293W	EMP47	P43555	445 aa		7.22	□□□□□ -1.25
MSB3	YNL293W	NMD5	P46970	1048 aa		7.22	□□□□□ -1.25
MSB3	YNL293W	ELP3	Q02908	557 aa	Known RBP	7.22	□□□□□ -1.25
MSB3	YNL293W	JIP4	Q03361	876 aa		7.22	□□□□□ -1.25
MSB3	YNL293W	YDR249C	Q03787	373 aa		7.22	□□□□□ -1.25
MSB3	YNL293W	SOV1	Q04748	898 aa		7.22	□□□□□ -1.25
MSB3	YNL293W	WHI4	Q07655	649 aa	Known RBP	7.22	□□□□□ -1.25
MSB3	YNL293W	FRA1	Q07825	749 aa		7.22	□□□□□ -1.25
MSB3	YNL293W	FEX1	Q08913	375 aa		7.22	□□□□□ -1.25
MSB3	YNL293W	AFT2	Q08957	416 aa		7.22	□□□□□ -1.25
MSB3	YNL293W	LAG2	Q92325	660 aa		7.22	□□□□□ -1.25
MSB3	YNL293W	SRN2	Q99176	213 aa		7.22	□□□□□ -1.25
MSB3	YNL293W	TY1B-JR2	P47100	1755 aa	Known RBP	7.22	□□□□□ -1.25
MSB3	YNL293W	TY1B-ER2	Q03619	1755 aa		7.22	□□□□□ -1.25
MSB3	YNL293W	TY1B-MR1	Q04214	1755 aa		7.22	□□□□□ -1.25
MSB3	YNL293W	TY1B-MR2	Q04670	1755 aa	Known RBP	7.22	□□□□□ -1.25
MSB3	YNL293W	TY1B-LR1	Q12088	1755 aa	Known RBP	7.22	□□□□□ -1.25
MSB3	YNL293W	TY1B-NL1	Q12112	1755 aa		7.22	□□□□□ -1.25
MSB3	YNL293W	TY1B-GR1	Q12141	1755 aa		7.22	□□□□□ -1.25
MSB3	YNL293W	TY1B-BL	Q12490	1755 aa		7.22	□□□□□ -1.25
MSB3	YNL293W	TRP2	P00899	507 aa	Known RBP	7.21	□□□□□ -1.25
MSB3	YNL293W	ARG3	P05150	338 aa		7.21	□□□□□ -1.25
MSB3	YNL293W	SCP160	P06105	1222 aa	Known RBP RIP-Chip data	7.21	□□□□□ -1.25	not detected
MSB3	YNL293W	PBS2	P08018	668 aa		7.21	□□□□□ -1.25
MSB3	YNL293W	PRP28	P23394	588 aa		7.21	□□□□□ -1.25
MSB3	YNL293W	SRO9	P25567	434 aa	Known RBP	7.21	□□□□□ -1.25
MSB3	YNL293W	SAC6	P32599	642 aa	Known RBP	7.21	□□□□□ -1.25
MSB3	YNL293W	YKL100C	P34248	587 aa		7.21	□□□□□ -1.25
MSB3	YNL293W	YET1	P35723	206 aa		7.21	□□□□□ -1.25
MSB3	YNL293W	DED81	P38707	554 aa	Known RBP	7.21	□□□□□ -1.25
MSB3	YNL293W	YHR219W	P38900	624 aa		7.21	□□□□□ -1.25
MSB3	YNL293W	FRT2	P39734	528 aa		7.21	□□□□□ -1.25
MSB3	YNL293W	PTC2	P39966	464 aa	Known RBP	7.21	□□□□□ -1.25
MSB3	YNL293W	YMR134W	P40207	237 aa		7.21	□□□□□ -1.25
MSB3	YNL293W	FET5	P43561	622 aa		7.21	□□□□□ -1.25
MSB3	YNL293W	FOL2	P51601	243 aa	Known RBP	7.21	□□□□□ -1.25
MSB3	YNL293W	APP1	P53933	587 aa		7.21	□□□□□ -1.25
MSB3	YNL293W	ADE16	P54113	591 aa	Known RBP	7.21	□□□□□ -1.25
MSB3	YNL293W	IRC4	Q03036	179 aa		7.21	□□□□□ -1.25
MSB3	YNL293W	BUL2	Q03758	920 aa	Known RBP	7.21	□□□□□ -1.25
MSB3	YNL293W	TIF35	Q04067	274 aa	Known RBP	7.21	□□□□□ -1.25
MSB3	YNL293W	SSP2	Q08646	371 aa		7.21	□□□□□ -1.25
MSB3	YNL293W	YPR204W	Q08995	1032 aa		7.21	□□□□□ -1.25
MSB3	YNL293W	GTT2	Q12390	233 aa		7.21	□□□□□ -1.25
MSB3	YNL293W	ADF1	Q2V2Q1	113 aa		7.21	□□□□□ -1.25
MSB3	YNL293W	BI4	P03879	638 aa		7.21	□□□□□ -1.26
MSB3	YNL293W	RPL25	P04456	142 aa	Known RBP	7.21	□□□□□ -1.26
MSB3	YNL293W	ERG12	P07277	443 aa		7.21	□□□□□ -1.26
MSB3	YNL293W	IRE1	P32361	1115 aa		7.21	□□□□□ -1.26
MSB3	YNL293W	EDS1	P38073	919 aa		7.21	□□□□□ -1.26
MSB3	YNL293W	ARA1	P38115	344 aa		7.21	□□□□□ -1.26
MSB3	YNL293W	FUI1	P38196	639 aa		7.21	□□□□□ -1.26
MSB3	YNL293W	PRS2	P38620	318 aa	Known RBP	7.21	□□□□□ -1.26
MSB3	YNL293W	TRM5	P38793	499 aa		7.21	□□□□□ -1.26
MSB3	YNL293W	YHR202W	P38887	602 aa		7.21	□□□□□ -1.26
MSB3	YNL293W	GTT1	P40582	234 aa		7.21	□□□□□ -1.26
MSB3	YNL293W	CIN5	P40917	295 aa		7.21	□□□□□ -1.26
MSB3	YNL293W	ERG10	P41338	398 aa	Known RBP	7.21	□□□□□ -1.26
MSB3	YNL293W	RPT6	Q01939	405 aa	Known RBP	7.21	□□□□□ -1.26
MSB3	YNL293W	DCN1	Q12395	269 aa		7.21	□□□□□ -1.26
MSB3	YNL293W	VTH1	P40438	1549 aa		7.2	□□□□□ -1.26
MSB3	YNL293W	GCD1	P09032	578 aa	Predicted RBP	7.2	□□□□□ -1.26
MSB3	YNL293W	TIF1	P10081	395 aa	Known RBP	7.2	□□□□□ -1.26
MSB3	YNL293W	CLN3	P13365	580 aa		7.2	□□□□□ -1.26
MSB3	YNL293W	RNR3	P21672	869 aa	Known RBP	7.2	□□□□□ -1.26
MSB3	YNL293W	MRM1	P25270	412 aa		7.2	□□□□□ -1.26
MSB3	YNL293W	YBR139W	P38109	508 aa		7.2	□□□□□ -1.26
MSB3	YNL293W	MNN9	P39107	395 aa	Known RBP	7.2	□□□□□ -1.26
MSB3	YNL293W	PZF1	P39933	429 aa		7.2	□□□□□ -1.26
MSB3	YNL293W	SPF1	P39986	1215 aa	Known RBP	7.2	□□□□□ -1.26
MSB3	YNL293W	DAN4	P47179	1161 aa		7.2	□□□□□ -1.26
MSB3	YNL293W	COG1	P53079	417 aa		7.2	□□□□□ -1.26
MSB3	YNL293W	NUT1	P53114	1132 aa		7.2	□□□□□ -1.26
MSB3	YNL293W	FMP48	P53233	369 aa		7.2	□□□□□ -1.26

Retrieved 100 of 5,963 RNA–protein pairs in 33.3 ms