RNA–Protein interactions for RNA: YNL222W

SSU72, Transcript of Phosphatase and transcription/RNA-processing factor, yeastyeast

Gene SSU72, Length 621 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSU72YNL222W CAB2P40506 365 aa4.78□□□□□ -1.64
SSU72YNL222W YGR079WP53249 370 aa4.78□□□□□ -1.64
SSU72YNL222W MET14Q02196 202 aa4.78□□□□□ -1.64
SSU72YNL222W ARA2Q04212 335 aa4.78□□□□□ -1.64
SSU72YNL222W GET3Q12154 354 aaKnown RBP4.78□□□□□ -1.64
SSU72YNL222W YBR255C-AQ3E776 120 aa4.78□□□□□ -1.64
SSU72YNL222W POL3P15436 1097 aa4.77□□□□□ -1.65
SSU72YNL222W RIT1P23796 513 aa4.77□□□□□ -1.65
SSU72YNL222W SWI4P25302 1093 aaKnown RBP4.77□□□□□ -1.65
SSU72YNL222W YKL133CP36066 463 aa4.77□□□□□ -1.65
SSU72YNL222W APM3P38153 483 aa4.77□□□□□ -1.65
SSU72YNL222W IRC8P47046 822 aa4.77□□□□□ -1.65
SSU72YNL222W TAM41P53230 385 aa4.77□□□□□ -1.65
SSU72YNL222W COX1P00401 534 aa4.76□□□□□ -1.65
SSU72YNL222W ADE3P07245 946 aaKnown RBP4.76□□□□□ -1.65
SSU72YNL222W PTC6P25646 442 aa4.76□□□□□ -1.65
SSU72YNL222W RPT3P33298 428 aaKnown RBP4.76□□□□□ -1.65
SSU72YNL222W QRI7P43122 407 aa4.76□□□□□ -1.65
SSU72YNL222W YPL108WQ02872 168 aaPredicted RBP4.76□□□□□ -1.65
SSU72YNL222W HIM1Q06674 414 aa4.76□□□□□ -1.65
SSU72YNL222W BRE1Q07457 700 aaKnown RBP4.76□□□□□ -1.65
SSU72YNL222W GAL1P04385 528 aa4.75□□□□□ -1.65
SSU72YNL222W LAC1P28496 418 aa4.75□□□□□ -1.65
SSU72YNL222W SWC3P31376 625 aa4.75□□□□□ -1.65
SSU72YNL222W FUN12P39730 1002 aaKnown RBP4.75□□□□□ -1.65
SSU72YNL222W SCS3P53012 380 aa4.75□□□□□ -1.65
SSU72YNL222W TAN1P53072 289 aaPredicted RBP4.75□□□□□ -1.65
SSU72YNL222W RPL15BP54780 204 aaPredicted RBP4.75□□□□□ -1.65
SSU72YNL222W MLC2Q06580 163 aa4.75□□□□□ -1.65
SSU72YNL222W LEA1Q08963 238 aaPredicted RBP4.75□□□□□ -1.65
SSU72YNL222W SEC18P18759 758 aaKnown RBP4.74□□□□□ -1.65
SSU72YNL222W YCP4P25349 247 aaKnown RBP4.74□□□□□ -1.65
SSU72YNL222W HIS6P40545 261 aa4.74□□□□□ -1.65
SSU72YNL222W ORC5P50874 479 aa4.74□□□□□ -1.65
SSU72YNL222W MRPL1Q04599 285 aa4.74□□□□□ -1.65
SSU72YNL222W EIS1Q05050 843 aaKnown RBP4.74□□□□□ -1.65
SSU72YNL222W THI3Q07471 609 aa4.74□□□□□ -1.65
SSU72YNL222W IWR1Q07532 353 aaPredicted RBP4.74□□□□□ -1.65
SSU72YNL222W PIF1P07271 859 aa4.73□□□□□ -1.65
SSU72YNL222W MGM1P32266 881 aa4.73□□□□□ -1.65
SSU72YNL222W YPR003CP53394 754 aa4.73□□□□□ -1.65
SSU72YNL222W ATG21Q02887 496 aa4.73□□□□□ -1.65
SSU72YNL222W TDA9Q04545 1251 aa4.73□□□□□ -1.65
SSU72YNL222W SUL2Q12325 893 aa4.73□□□□□ -1.65
SSU72YNL222W MSS18P08593 268 aa4.72□□□□□ -1.65
SSU72YNL222W MCM3P24279 971 aaKnown RBP4.72□□□□□ -1.65
SSU72YNL222W URK1P27515 501 aa4.72□□□□□ -1.65
SSU72YNL222W SPC72P39723 622 aa4.72□□□□□ -1.65
SSU72YNL222W YJL107CP42947 387 aa4.72□□□□□ -1.65
SSU72YNL222W UBX6P47049 396 aa4.72□□□□□ -1.65
SSU72YNL222W RVB2Q12464 471 aaKnown RBP4.72□□□□□ -1.65
SSU72YNL222W RRI1Q12468 440 aa4.72□□□□□ -1.65
SSU72YNL222W YPT1P01123 206 aaKnown RBP4.71□□□□□ -1.66
SSU72YNL222W PET122P10355 254 aa4.71□□□□□ -1.66
SSU72YNL222W AIM17P23180 465 aaKnown RBP4.71□□□□□ -1.66
SSU72YNL222W MSS51P32335 436 aa4.71□□□□□ -1.66
SSU72YNL222W ARP2P32381 391 aaKnown RBP4.71□□□□□ -1.66
SSU72YNL222W HES1P35843 434 aa4.71□□□□□ -1.66
SSU72YNL222W SCO2P38072 301 aa4.71□□□□□ -1.66
SSU72YNL222W GND1P38720 489 aaKnown RBP4.71□□□□□ -1.66
SSU72YNL222W YIR016WP40572 265 aa4.71□□□□□ -1.66
SSU72YNL222W CPR6P53691 371 aaKnown RBP4.71□□□□□ -1.66
SSU72YNL222W YDR109CQ04585 715 aa4.71□□□□□ -1.66
SSU72YNL222W PUF2Q12221 1075 aaKnown RBP RIP-Chip data4.71□□□□□ -1.66not detected
SSU72YNL222W CNA1P23287 553 aa4.7□□□□□ -1.66
SSU72YNL222W PTP2P29461 750 aa4.7□□□□□ -1.66
SSU72YNL222W ARN1P38731 627 aa4.7□□□□□ -1.66
SSU72YNL222W CDC1P40986 491 aa4.7□□□□□ -1.66
SSU72YNL222W LYS20P48570 428 aaKnown RBP4.7□□□□□ -1.66
SSU72YNL222W YRB30P53107 440 aaPredicted RBP4.7□□□□□ -1.66
SSU72YNL222W GTB1Q04924 702 aa4.7□□□□□ -1.66
SSU72YNL222W STP3Q05937 343 aa4.7□□□□□ -1.66
SSU72YNL222W ECM22Q05958 814 aaPredicted RBP4.7□□□□□ -1.66
SSU72YNL222W MIS1P09440 975 aaKnown RBP4.69□□□□□ -1.66
SSU72YNL222W MSH1P25846 959 aa4.69□□□□□ -1.66
SSU72YNL222W PXL1P36166 706 aa4.69□□□□□ -1.66
SSU72YNL222W TOM71P38825 639 aaKnown RBP4.69□□□□□ -1.66
SSU72YNL222W SKP2P42843 763 aa4.69□□□□□ -1.66
SSU72YNL222W MDV1P47025 714 aa4.69□□□□□ -1.66
SSU72YNL222W YPT11P48559 417 aa4.69□□□□□ -1.66
SSU72YNL222W IMA1P53051 589 aa4.69□□□□□ -1.66
SSU72YNL222W YNL144CP53907 740 aa4.69□□□□□ -1.66
SSU72YNL222W VTC3Q02725 835 aa4.69□□□□□ -1.66
SSU72YNL222W ATX2Q12067 313 aa4.69□□□□□ -1.66
SSU72YNL222W YEF3P16521 1044 aaKnown RBP4.68□□□□□ -1.66
SSU72YNL222W ATO2P32907 282 aa4.68□□□□□ -1.66
SSU72YNL222W YBR138CP38277 524 aa4.68□□□□□ -1.66
SSU72YNL222W ZAP1P47043 880 aa4.68□□□□□ -1.66
SSU72YNL222W MTG1Q03151 367 aaPredicted RBP4.68□□□□□ -1.66
SSU72YNL222W PDR8Q06149 701 aa4.68□□□□□ -1.66
SSU72YNL222W NYV1Q12255 253 aa4.68□□□□□ -1.66
SSU72YNL222W YUR1P26725 428 aa4.67□□□□□ -1.66
SSU72YNL222W RFA2P26754 273 aaKnown RBP4.67□□□□□ -1.66
SSU72YNL222W GCD7P32502 381 aaPredicted RBP4.67□□□□□ -1.66
SSU72YNL222W BUD16P39988 312 aa4.67□□□□□ -1.66
SSU72YNL222W VPS27P40343 622 aaKnown RBP4.67□□□□□ -1.66
SSU72YNL222W ADE16P54113 591 aaKnown RBP4.67□□□□□ -1.66
SSU72YNL222W SNA4Q07549 140 aa4.67□□□□□ -1.66
SSU72YNL222W ATP4P05626 244 aa4.66□□□□□ -1.66
SSU72YNL222W BIK1P11709 440 aa4.66□□□□□ -1.66
Retrieved 100 of 5,963 RNA–protein pairs in 24.9 ms