RNA–Protein interactions for RNA: YIL061C

SNP1, Transcript of Component of U1 snRNP required for mRNA splicing via spliceosome, yeastyeast

Gene SNP1, Length 903 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SNP1YIL061C SEC6P32844 805 aa7.76□□□□□ -1.17
SNP1YIL061C ECM13P38195 257 aa7.76□□□□□ -1.17
SNP1YIL061C KAP104P38217 918 aaKnown RBP7.76□□□□□ -1.17
SNP1YIL061C YBR225WP38321 900 aa7.76□□□□□ -1.17
SNP1YIL061C PHO89P38361 574 aa7.76□□□□□ -1.17
SNP1YIL061C YHI9P38765 294 aa7.76□□□□□ -1.17
SNP1YIL061C YDR089WP38966 869 aa7.76□□□□□ -1.17
SNP1YIL061C SEC28P40509 296 aaKnown RBP7.76□□□□□ -1.17
SNP1YIL061C YFL052WP43551 465 aa7.76□□□□□ -1.17
SNP1YIL061C ROK1P45818 564 aaPredicted RBP7.76□□□□□ -1.17
SNP1YIL061C DLD2P46681 530 aaKnown RBP7.76□□□□□ -1.17
SNP1YIL061C FOL2P51601 243 aaKnown RBP7.76□□□□□ -1.17
SNP1YIL061C NHX1Q04121 633 aa7.76□□□□□ -1.17
SNP1YIL061C YML083CQ04526 418 aa7.76□□□□□ -1.17
SNP1YIL061C GPN2Q08726 347 aaPredicted RBP7.76□□□□□ -1.17
SNP1YIL061C MRN1Q08925 612 aaKnown RBP RIP-Chip data7.76□□□□□ -1.17not detected
SNP1YIL061C SAM3Q08986 587 aa7.76□□□□□ -1.17
SNP1YIL061C SVS1Q12254 260 aa7.76□□□□□ -1.17
SNP1YIL061C LDB17Q12342 491 aa7.76□□□□□ -1.17
SNP1YIL061C YMR030W-AQ3E760 96 aa7.76□□□□□ -1.17
SNP1YIL061C COX5AP00424 153 aa7.75□□□□□ -1.17
SNP1YIL061C ENO2P00925 437 aaKnown RBP7.75□□□□□ -1.17
SNP1YIL061C MIS1P09440 975 aaKnown RBP7.75□□□□□ -1.17
SNP1YIL061C APE1P14904 514 aa7.75□□□□□ -1.17
SNP1YIL061C HSP26P15992 214 aaKnown RBP RIP-Chip data7.75□□□□□ -1.17not detected
SNP1YIL061C SIP2P34164 415 aaKnown RBP7.75□□□□□ -1.17
SNP1YIL061C RFS1P38234 210 aaKnown RBP7.75□□□□□ -1.17
SNP1YIL061C SRP68P38687 599 aaKnown RBP7.75□□□□□ -1.17
SNP1YIL061C KTR7P40504 517 aa7.75□□□□□ -1.17
SNP1YIL061C CNN1P43618 361 aa7.75□□□□□ -1.17
SNP1YIL061C ASN2P49090 572 aaKnown RBP7.75□□□□□ -1.17
SNP1YIL061C MRM2P53123 320 aa7.75□□□□□ -1.17
SNP1YIL061C COP1P53622 1201 aaKnown RBP7.75□□□□□ -1.17
SNP1YIL061C IST1P53843 298 aaPredicted RBP7.75□□□□□ -1.17
SNP1YIL061C SIW14P53965 281 aa7.75□□□□□ -1.17
SNP1YIL061C MRI1Q06489 411 aaKnown RBP7.75□□□□□ -1.17
SNP1YIL061C BUD20Q08004 166 aaPredicted RBP7.75□□□□□ -1.17
SNP1YIL061C TMA46Q12000 345 aaKnown RBP7.75□□□□□ -1.17
SNP1YIL061C OCA6Q12454 224 aa7.75□□□□□ -1.17
SNP1YIL061C MPH2P0CD99 609 aa7.74□□□□□ -1.17
SNP1YIL061C CAD1P24813 409 aaKnown RBP7.74□□□□□ -1.17
SNP1YIL061C DAL1P32375 460 aa7.74□□□□□ -1.17
SNP1YIL061C SSE1P32589 693 aaKnown RBP7.74□□□□□ -1.17
SNP1YIL061C MRS6P32864 603 aaKnown RBP7.74□□□□□ -1.17
SNP1YIL061C TFC3P34111 1160 aa7.74□□□□□ -1.17
SNP1YIL061C GCS1P35197 352 aa7.74□□□□□ -1.17
SNP1YIL061C YKR051WP36142 418 aa7.74□□□□□ -1.17
SNP1YIL061C TSC10P38342 320 aa7.74□□□□□ -1.17
SNP1YIL061C STN1P38960 494 aa7.74□□□□□ -1.17
SNP1YIL061C MNN1P39106 762 aa7.74□□□□□ -1.17
SNP1YIL061C SEO1P39709 593 aa7.74□□□□□ -1.17
SNP1YIL061C RRN7P40992 514 aa7.74□□□□□ -1.17
SNP1YIL061C BFA1P47113 574 aa7.74□□□□□ -1.17
SNP1YIL061C RNR4P49723 345 aaKnown RBP7.74□□□□□ -1.17
SNP1YIL061C USE1P53146 245 aa7.74□□□□□ -1.17
SNP1YIL061C LGE1Q02796 332 aaKnown RBP7.74□□□□□ -1.17
SNP1YIL061C AFI1Q99222 893 aa7.74□□□□□ -1.17
SNP1YIL061C ACO1P19414 778 aaKnown RBP RIP-Chip data7.73□□□□□ -1.17not detected
SNP1YIL061C MRM1P25270 412 aa7.73□□□□□ -1.17
SNP1YIL061C PSE1P32337 1089 aaKnown RBP7.73□□□□□ -1.17
SNP1YIL061C ATG12P38316 186 aa7.73□□□□□ -1.17
SNP1YIL061C MEF2P39677 819 aa7.73□□□□□ -1.17
SNP1YIL061C MDJ2P42834 146 aa7.73□□□□□ -1.17
SNP1YIL061C UBP6P43593 499 aaKnown RBP7.73□□□□□ -1.17
SNP1YIL061C MIG2P53035 382 aa7.73□□□□□ -1.17
SNP1YIL061C TEL2P53038 688 aa7.73□□□□□ -1.17
SNP1YIL061C STR3P53101 465 aaKnown RBP7.73□□□□□ -1.17
SNP1YIL061C NOP15P53927 220 aaPredicted RBP7.73□□□□□ -1.17
SNP1YIL061C CDC14Q00684 551 aa7.73□□□□□ -1.17
SNP1YIL061C OSH6Q02201 448 aa7.73□□□□□ -1.17
SNP1YIL061C PIR3Q03180 325 aa7.73□□□□□ -1.17
SNP1YIL061C GCN5Q03330 439 aa7.73□□□□□ -1.17
SNP1YIL061C HER2Q03557 464 aa7.73□□□□□ -1.17
SNP1YIL061C ECM38Q05902 660 aaPredicted RBP7.73□□□□□ -1.17
SNP1YIL061C APC9Q12107 265 aa7.73□□□□□ -1.17
SNP1YIL061C STB3Q12427 513 aa7.73□□□□□ -1.17
SNP1YIL061C ERG20P08524 352 aaKnown RBP7.72□□□□□ -1.17
SNP1YIL061C PGS1P25578 521 aa7.72□□□□□ -1.17
SNP1YIL061C RAD27P26793 382 aa7.72□□□□□ -1.17
SNP1YIL061C RAD14P28519 371 aa7.72□□□□□ -1.17
SNP1YIL061C RRN3P36070 627 aa7.72□□□□□ -1.17
SNP1YIL061C MRP21P38175 177 aa7.72□□□□□ -1.17
SNP1YIL061C URA8P38627 578 aaPredicted RBP7.72□□□□□ -1.17
SNP1YIL061C YHR182WP38870 785 aa7.72□□□□□ -1.17
SNP1YIL061C FRT2P39734 528 aa7.72□□□□□ -1.17
SNP1YIL061C VAC8P39968 578 aa7.72□□□□□ -1.17
SNP1YIL061C ALG5P40350 334 aa7.72□□□□□ -1.17
SNP1YIL061C HOS4P40480 1083 aa7.72□□□□□ -1.17
SNP1YIL061C YFL040WP43562 540 aa7.72□□□□□ -1.17
SNP1YIL061C PEX8P53248 589 aa7.72□□□□□ -1.17
SNP1YIL061C UTP8P53276 713 aaKnown RBP7.72□□□□□ -1.17
SNP1YIL061C TRS31Q03337 283 aa7.72□□□□□ -1.17
SNP1YIL061C SYT1Q06836 1226 aa7.72□□□□□ -1.17
SNP1YIL061C ENT4Q07872 247 aa7.72□□□□□ -1.17
SNP1YIL061C PEX15Q08215 383 aa7.72□□□□□ -1.17
SNP1YIL061C PGC1Q08959 321 aa7.72□□□□□ -1.17
SNP1YIL061C RRP36Q12481 300 aaPredicted RBP7.72□□□□□ -1.17
SNP1YIL061C YLR422WQ06409 1932 aa7.72□□□□□ -1.17
SNP1YIL061C UBR2Q07963 1872 aa7.71□□□□□ -1.18
SNP1YIL061C RHO2P06781 192 aa7.71□□□□□ -1.18
Retrieved 100 of 5,963 RNA–protein pairs in 12 ms