RNA–Protein interactions for RNA: YEL048C

TCA17, Transcript of Component of transport protein particle (TRAPP) complex II, yeast

Gene TCA17, Length 459 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TCA17	YEL048C	ORC5	P50874	479 aa		4.93	□□□□□ -1.62
TCA17	YEL048C	MGM1	P32266	881 aa		4.92	□□□□□ -1.62
TCA17	YEL048C	FRD1	P32614	470 aa	Known RBP	4.92	□□□□□ -1.62
TCA17	YEL048C	RPT3	P33298	428 aa	Known RBP	4.92	□□□□□ -1.62
TCA17	YEL048C	SCO2	P38072	301 aa		4.92	□□□□□ -1.62
TCA17	YEL048C	APM3	P38153	483 aa		4.92	□□□□□ -1.62
TCA17	YEL048C	SKP2	P42843	763 aa		4.92	□□□□□ -1.62
TCA17	YEL048C	NPA3	P47122	385 aa		4.92	□□□□□ -1.62
TCA17	YEL048C	MET14	Q02196	202 aa		4.92	□□□□□ -1.62
TCA17	YEL048C	MLC2	Q06580	163 aa		4.92	□□□□□ -1.62
TCA17	YEL048C	LEA1	Q08963	238 aa	Predicted RBP	4.92	□□□□□ -1.62
TCA17	YEL048C	GET3	Q12154	354 aa	Known RBP	4.92	□□□□□ -1.62
TCA17	YEL048C	LAC1	P28496	418 aa		4.91	□□□□□ -1.62
TCA17	YEL048C	GSH1	P32477	678 aa		4.91	□□□□□ -1.62
TCA17	YEL048C	HIS6	P40545	261 aa		4.91	□□□□□ -1.62
TCA17	YEL048C	IRC8	P47046	822 aa		4.91	□□□□□ -1.62
TCA17	YEL048C	IWR1	Q07532	353 aa	Predicted RBP	4.91	□□□□□ -1.62
TCA17	YEL048C	CIR2	Q08822	631 aa		4.91	□□□□□ -1.62
TCA17	YEL048C	RVB2	Q12464	471 aa	Known RBP	4.91	□□□□□ -1.62
TCA17	YEL048C	COX1	P00401	534 aa		4.9	□□□□□ -1.63
TCA17	YEL048C	MIS1	P09440	975 aa	Known RBP	4.9	□□□□□ -1.63
TCA17	YEL048C	YER190C-B	P0CX94	160 aa		4.9	□□□□□ -1.63
TCA17	YEL048C	YEL077W-A	P0CX95	160 aa		4.9	□□□□□ -1.63
TCA17	YEL048C	YGR296C-B	P0CX96	160 aa		4.9	□□□□□ -1.63
TCA17	YEL048C	YPL283W-B	P0CX97	160 aa		4.9	□□□□□ -1.63
TCA17	YEL048C	YPR204C-A	P0CX98	160 aa		4.9	□□□□□ -1.63
TCA17	YEL048C	RIT1	P23796	513 aa		4.9	□□□□□ -1.63
TCA17	YEL048C	GCD7	P32502	381 aa	Predicted RBP	4.9	□□□□□ -1.63
TCA17	YEL048C	ERV46	P39727	415 aa		4.9	□□□□□ -1.63
TCA17	YEL048C	VPS27	P40343	622 aa	Known RBP	4.9	□□□□□ -1.63
TCA17	YEL048C	THI3	Q07471	609 aa		4.9	□□□□□ -1.63
TCA17	YEL048C	PFA4	Q12006	378 aa		4.9	□□□□□ -1.63
TCA17	YEL048C	ADE3	P07245	946 aa	Known RBP	4.89	□□□□□ -1.63
TCA17	YEL048C	PIF1	P07271	859 aa		4.89	□□□□□ -1.63
TCA17	YEL048C	MSH1	P25846	959 aa		4.89	□□□□□ -1.63
TCA17	YEL048C	QRI7	P43122	407 aa		4.89	□□□□□ -1.63
TCA17	YEL048C	SCS3	P53012	380 aa		4.89	□□□□□ -1.63
TCA17	YEL048C	YGR079W	P53249	370 aa		4.89	□□□□□ -1.63
TCA17	YEL048C	VTC3	Q02725	835 aa		4.89	□□□□□ -1.63
TCA17	YEL048C	YDR109C	Q04585	715 aa		4.89	□□□□□ -1.63
TCA17	YEL048C	HIM1	Q06674	414 aa		4.89	□□□□□ -1.63
TCA17	YEL048C	GAL1	P04385	528 aa		4.88	□□□□□ -1.63
TCA17	YEL048C	PET122	P10355	254 aa		4.88	□□□□□ -1.63
TCA17	YEL048C	SEC18	P18759	758 aa	Known RBP	4.88	□□□□□ -1.63
TCA17	YEL048C	MCM3	P24279	971 aa	Known RBP	4.88	□□□□□ -1.63
TCA17	YEL048C	PTP2	P29461	750 aa		4.88	□□□□□ -1.63
TCA17	YEL048C	TOM71	P38825	639 aa	Known RBP	4.88	□□□□□ -1.63
TCA17	YEL048C	FAF1	P40546	346 aa	Predicted RBP	4.88	□□□□□ -1.63
TCA17	YEL048C	YIR016W	P40572	265 aa		4.88	□□□□□ -1.63
TCA17	YEL048C	YJL107C	P42947	387 aa		4.88	□□□□□ -1.63
TCA17	YEL048C	YRB30	P53107	440 aa	Predicted RBP	4.88	□□□□□ -1.63
TCA17	YEL048C	YNL144C	P53907	740 aa		4.88	□□□□□ -1.63
TCA17	YEL048C	NYV1	Q12255	253 aa		4.88	□□□□□ -1.63
TCA17	YEL048C	RRI1	Q12468	440 aa		4.88	□□□□□ -1.63
TCA17	YEL048C	GAL4	P04386	881 aa		4.87	□□□□□ -1.63
TCA17	YEL048C	HES1	P35843	434 aa		4.87	□□□□□ -1.63
TCA17	YEL048C	ARN1	P38731	627 aa		4.87	□□□□□ -1.63
TCA17	YEL048C	RPL15B	P54780	204 aa	Predicted RBP	4.87	□□□□□ -1.63
TCA17	YEL048C	MOT3	P54785	490 aa	Known RBP	4.87	□□□□□ -1.63
TCA17	YEL048C	GTB1	Q04924	702 aa		4.87	□□□□□ -1.63
TCA17	YEL048C	ECM22	Q05958	814 aa	Predicted RBP	4.87	□□□□□ -1.63
TCA17	YEL048C	BRE1	Q07457	700 aa	Known RBP	4.87	□□□□□ -1.63
TCA17	YEL048C	ATX2	Q12067	313 aa		4.87	□□□□□ -1.63
TCA17	YEL048C	AIM17	P23180	465 aa	Known RBP	4.86	□□□□□ -1.63
TCA17	YEL048C	CNA1	P23287	553 aa		4.86	□□□□□ -1.63
TCA17	YEL048C	SWI4	P25302	1093 aa	Known RBP	4.86	□□□□□ -1.63
TCA17	YEL048C	URK1	P27515	501 aa		4.86	□□□□□ -1.63
TCA17	YEL048C	UBP7	P40453	1071 aa		4.86	□□□□□ -1.63
TCA17	YEL048C	MDV1	P47025	714 aa		4.86	□□□□□ -1.63
TCA17	YEL048C	CPR6	P53691	371 aa	Known RBP	4.86	□□□□□ -1.63
TCA17	YEL048C	MTG1	Q03151	367 aa	Predicted RBP	4.86	□□□□□ -1.63
TCA17	YEL048C	EIS1	Q05050	843 aa	Known RBP	4.86	□□□□□ -1.63
TCA17	YEL048C	SUL2	Q12325	893 aa		4.86	□□□□□ -1.63
TCA17	YEL048C	ATP4	P05626	244 aa		4.85	□□□□□ -1.63
TCA17	YEL048C	ARP2	P32381	391 aa	Known RBP	4.85	□□□□□ -1.63
TCA17	YEL048C	PXL1	P36166	706 aa		4.85	□□□□□ -1.63
TCA17	YEL048C	IMA1	P53051	589 aa		4.85	□□□□□ -1.63
TCA17	YEL048C	YPR003C	P53394	754 aa		4.85	□□□□□ -1.63
TCA17	YEL048C	PDR8	Q06149	701 aa		4.85	□□□□□ -1.63
TCA17	YEL048C	PUF2	Q12221	1075 aa	Known RBP RIP-Chip data	4.85	□□□□□ -1.63	not detected
TCA17	YEL048C	MSS18	P08593	268 aa		4.84	□□□□□ -1.63
TCA17	YEL048C	SUI3	P09064	285 aa	Known RBP	4.84	□□□□□ -1.63
TCA17	YEL048C	YEF3	P16521	1044 aa	Known RBP	4.84	□□□□□ -1.63
TCA17	YEL048C	YCP4	P25349	247 aa	Known RBP	4.84	□□□□□ -1.63
TCA17	YEL048C	YPT11	P48559	417 aa		4.84	□□□□□ -1.63
TCA17	YEL048C	TAM41	P53230	385 aa		4.84	□□□□□ -1.63
TCA17	YEL048C	LSC1	P53598	329 aa	Known RBP	4.84	□□□□□ -1.63
TCA17	YEL048C	BOP3	P53958	396 aa		4.84	□□□□□ -1.63
TCA17	YEL048C	FSH1	P38777	243 aa	Known RBP	4.83	□□□□□ -1.64
TCA17	YEL048C	DJP1	P40564	432 aa		4.83	□□□□□ -1.64
TCA17	YEL048C	ZAP1	P47043	880 aa		4.83	□□□□□ -1.64
TCA17	YEL048C	LYS20	P48570	428 aa	Known RBP	4.83	□□□□□ -1.64
TCA17	YEL048C	ATG23	Q06671	453 aa		4.83	□□□□□ -1.64
TCA17	YEL048C	SNA4	Q07549	140 aa		4.83	□□□□□ -1.64
TCA17	YEL048C	BAG7	Q12128	409 aa		4.83	□□□□□ -1.64
TCA17	YEL048C	RRP6	Q12149	733 aa	Known RBP	4.83	□□□□□ -1.64
TCA17	YEL048C	UBX3	Q12229	455 aa		4.83	□□□□□ -1.64
TCA17	YEL048C	BIK1	P11709	440 aa		4.82	□□□□□ -1.64
TCA17	YEL048C	PHO81	P17442	1178 aa		4.82	□□□□□ -1.64
TCA17	YEL048C	ATO2	P32907	282 aa		4.82	□□□□□ -1.64

Retrieved 100 of 5,963 RNA–protein pairs in 36.5 ms