RNA–Protein interactions for RNA: YDR052C

DBF4, Transcript of Regulatory subunit of Cdc7p-Dbf4p kinase complex, yeast

Gene DBF4, Length 2,115 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
DBF4	YDR052C	EAP1	P36041	632 aa	Known RBP	5.28	□□□□□ -1.56
DBF4	YDR052C	PAM1	P37304	830 aa	Known RBP	5.28	□□□□□ -1.56
DBF4	YDR052C	YBP1	P38315	674 aa		5.28	□□□□□ -1.56
DBF4	YDR052C	RIM4	P38741	713 aa		5.28	□□□□□ -1.56
DBF4	YDR052C	SMF2	P38778	549 aa		5.28	□□□□□ -1.56
DBF4	YDR052C	IES5	P40060	125 aa		5.28	□□□□□ -1.56
DBF4	YDR052C	MAD3	P47074	515 aa		5.28	□□□□□ -1.56
DBF4	YDR052C	ASE1	P50275	885 aa		5.28	□□□□□ -1.56
DBF4	YDR052C	RAI1	P53063	387 aa	Known RBP	5.28	□□□□□ -1.56
DBF4	YDR052C	DSE4	P53753	1117 aa		5.28	□□□□□ -1.56
DBF4	YDR052C	GIS4	Q04233	774 aa		5.28	□□□□□ -1.56
DBF4	YDR052C	VTA1	Q06263	330 aa		5.28	□□□□□ -1.56
DBF4	YDR052C	ESF1	Q06344	628 aa	Known RBP	5.28	□□□□□ -1.56
DBF4	YDR052C	YLR352W	Q06479	807 aa		5.28	□□□□□ -1.56
DBF4	YDR052C	SWA2	Q06677	668 aa		5.28	□□□□□ -1.56
DBF4	YDR052C	NDE2	Q07500	545 aa		5.28	□□□□□ -1.56
DBF4	YDR052C	NTG2	Q08214	380 aa		5.28	□□□□□ -1.56
DBF4	YDR052C	SKI7	Q08491	747 aa	Predicted RBP	5.28	□□□□□ -1.56
DBF4	YDR052C	DIA2	Q08496	732 aa	Predicted RBP	5.28	□□□□□ -1.56
DBF4	YDR052C	ACM1	Q08981	209 aa		5.28	□□□□□ -1.56
DBF4	YDR052C	RAD59	Q12223	238 aa		5.28	□□□□□ -1.56
DBF4	YDR052C	HMS1	Q12398	434 aa		5.28	□□□□□ -1.56
DBF4	YDR052C	ATG11	Q12527	1178 aa		5.28	□□□□□ -1.56
DBF4	YDR052C	AI2	P03876	854 aa		5.27	□□□□□ -1.57
DBF4	YDR052C	GPH1	P06738	902 aa	Known RBP	5.27	□□□□□ -1.57
DBF4	YDR052C	KIN1	P13185	1064 aa		5.27	□□□□□ -1.57
DBF4	YDR052C	NPP1	P25353	742 aa		5.27	□□□□□ -1.57
DBF4	YDR052C	IMP2'	P32351	346 aa		5.27	□□□□□ -1.57
DBF4	YDR052C	MRT4	P33201	236 aa	Known RBP	5.27	□□□□□ -1.57
DBF4	YDR052C	SPT10	P35208	640 aa		5.27	□□□□□ -1.57
DBF4	YDR052C	PBP2	P38151	413 aa	Known RBP RIP-Chip data	5.27	□□□□□ -1.57	not detected
DBF4	YDR052C	TSC10	P38342	320 aa		5.27	□□□□□ -1.57
DBF4	YDR052C	GOS1	P38736	223 aa		5.27	□□□□□ -1.57
DBF4	YDR052C	AIM2	P39721	246 aa		5.27	□□□□□ -1.57
DBF4	YDR052C	YAT2	P40017	923 aa		5.27	□□□□□ -1.57
DBF4	YDR052C	SEC28	P40509	296 aa	Known RBP	5.27	□□□□□ -1.57
DBF4	YDR052C	YIL055C	P40523	627 aa	Known RBP	5.27	□□□□□ -1.57
DBF4	YDR052C	ALA1	P40825	983 aa	Known RBP	5.27	□□□□□ -1.57
DBF4	YDR052C	TIM54	P47045	478 aa		5.27	□□□□□ -1.57
DBF4	YDR052C	RSM26	P47141	266 aa		5.27	□□□□□ -1.57
DBF4	YDR052C	TAD1	P53065	400 aa		5.27	□□□□□ -1.57
DBF4	YDR052C	RIM8	P53179	542 aa		5.27	□□□□□ -1.57
DBF4	YDR052C	CAF120	P53836	1060 aa		5.27	□□□□□ -1.57
DBF4	YDR052C	SIW14	P53965	281 aa		5.27	□□□□□ -1.57
DBF4	YDR052C	RPL6A	Q02326	176 aa	Known RBP	5.27	□□□□□ -1.57
DBF4	YDR052C	SKI8	Q02793	397 aa	Predicted RBP	5.27	□□□□□ -1.57
DBF4	YDR052C	YMR279C	Q03263	540 aa		5.27	□□□□□ -1.57
DBF4	YDR052C	TDA5	Q06417	326 aa	Known RBP	5.27	□□□□□ -1.57
DBF4	YDR052C	ASA1	Q06822	443 aa		5.27	□□□□□ -1.57
DBF4	YDR052C	YPR202W	Q08993	238 aa		5.27	□□□□□ -1.57
DBF4	YDR052C	NCB2	Q92317	146 aa		5.27	□□□□□ -1.57
DBF4	YDR052C	PTP1	P25044	335 aa		5.27	□□□□□ -1.57
DBF4	YDR052C	KRR1	P25586	316 aa	Predicted RBP	5.27	□□□□□ -1.57
DBF4	YDR052C	GPI10	P30777	616 aa		5.27	□□□□□ -1.57
DBF4	YDR052C	LYP1	P32487	611 aa		5.27	□□□□□ -1.57
DBF4	YDR052C	ARA1	P38115	344 aa		5.27	□□□□□ -1.57
DBF4	YDR052C	CHK1	P38147	527 aa		5.27	□□□□□ -1.57
DBF4	YDR052C	RXT2	P38255	430 aa		5.27	□□□□□ -1.57
DBF4	YDR052C	YBR285W	P38354	144 aa		5.27	□□□□□ -1.57
DBF4	YDR052C	YHR045W	P38775	560 aa		5.27	□□□□□ -1.57
DBF4	YDR052C	SPC97	P38863	823 aa		5.27	□□□□□ -1.57
DBF4	YDR052C	HAL5	P38970	855 aa	Known RBP	5.27	□□□□□ -1.57
DBF4	YDR052C	GTT3	P39996	337 aa		5.27	□□□□□ -1.57
DBF4	YDR052C	HPM1	P40481	377 aa		5.27	□□□□□ -1.57
DBF4	YDR052C	ROG3	P43602	733 aa		5.27	□□□□□ -1.57
DBF4	YDR052C	YJR098C	P47139	656 aa		5.27	□□□□□ -1.57
DBF4	YDR052C	MLC1	P53141	149 aa		5.27	□□□□□ -1.57
DBF4	YDR052C	SOL4	P53315	255 aa		5.27	□□□□□ -1.57
DBF4	YDR052C	ZDS2	P54786	942 aa		5.27	□□□□□ -1.57
DBF4	YDR052C	VHS1	Q03785	461 aa		5.27	□□□□□ -1.57
DBF4	YDR052C	YMR027W	Q04371	470 aa		5.27	□□□□□ -1.57
DBF4	YDR052C	YEH1	Q07804	573 aa		5.27	□□□□□ -1.57
DBF4	YDR052C	FLC1	Q08967	793 aa		5.27	□□□□□ -1.57
DBF4	YDR052C	SET6	Q12529	373 aa		5.27	□□□□□ -1.57
DBF4	YDR052C	THS1	P04801	734 aa	Known RBP	5.26	□□□□□ -1.57
DBF4	YDR052C	TUB3	P09734	445 aa	Known RBP	5.26	□□□□□ -1.57
DBF4	YDR052C	RNR3	P21672	869 aa	Known RBP	5.26	□□□□□ -1.57
DBF4	YDR052C	RIT1	P23796	513 aa		5.26	□□□□□ -1.57
DBF4	YDR052C	ABZ1	P37254	787 aa	Predicted RBP	5.26	□□□□□ -1.57
DBF4	YDR052C	ECM2	P38241	364 aa	Known RBP	5.26	□□□□□ -1.57
DBF4	YDR052C	SAH1	P39954	449 aa	Known RBP	5.26	□□□□□ -1.57
DBF4	YDR052C	PIG2	P40187	538 aa		5.26	□□□□□ -1.57
DBF4	YDR052C	PFK26	P40433	827 aa	Known RBP	5.26	□□□□□ -1.57
DBF4	YDR052C	YDR249C	Q03787	373 aa		5.26	□□□□□ -1.57
DBF4	YDR052C	SPO77	Q06134	477 aa		5.26	□□□□□ -1.57
DBF4	YDR052C	BCP1	Q06338	283 aa		5.26	□□□□□ -1.57
DBF4	YDR052C	YPD1	Q07688	167 aa		5.26	□□□□□ -1.57
DBF4	YDR052C	PSR2	Q07949	397 aa		5.26	□□□□□ -1.57
DBF4	YDR052C	SNX3	Q08826	162 aa	Known RBP	5.26	□□□□□ -1.57
DBF4	YDR052C	FEX1	Q08913	375 aa		5.26	□□□□□ -1.57
DBF4	YDR052C	WRS1	Q12109	432 aa	Known RBP	5.26	□□□□□ -1.57
DBF4	YDR052C	DGK1	Q12382	290 aa		5.26	□□□□□ -1.57
DBF4	YDR052C	RPP1A	P05318	106 aa	Predicted RBP	5.26	□□□□□ -1.57
DBF4	YDR052C	CDC6	P09119	513 aa		5.26	□□□□□ -1.57
DBF4	YDR052C	NFT1	P0CE68	1218 aa		5.26	□□□□□ -1.57
DBF4	YDR052C	PDC5	P16467	563 aa	Known RBP	5.26	□□□□□ -1.57
DBF4	YDR052C	CMK2	P22517	447 aa		5.26	□□□□□ -1.57
DBF4	YDR052C	CPR3	P25719	182 aa		5.26	□□□□□ -1.57
DBF4	YDR052C	CIN8	P27895	1000 aa		5.26	□□□□□ -1.57
DBF4	YDR052C	PPQ1	P32945	549 aa		5.26	□□□□□ -1.57

Retrieved 100 of 5,963 RNA–protein pairs in 22.7 ms