RNA–Protein interactions for RNA: YAR002W

NUP60, Transcript of FG-nucleoporin component of central core of the nuclear pore complex, yeastyeast

Gene NUP60, Length 1,620 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NUP60YAR002W RPC37P36121 282 aa3.54□□□□□ -1.84
NUP60YAR002W PCA1P38360 1216 aa3.54□□□□□ -1.84
NUP60YAR002W CBR1P38626 284 aaKnown RBP3.54□□□□□ -1.84
NUP60YAR002W TMN3P40071 706 aa3.54□□□□□ -1.84
NUP60YAR002W YMR134WP40207 237 aa3.54□□□□□ -1.84
NUP60YAR002W ZAP1P47043 880 aa3.54□□□□□ -1.84
NUP60YAR002W RPL4BP49626 362 aaKnown RBP3.54□□□□□ -1.84
NUP60YAR002W INP52P50942 1183 aa3.54□□□□□ -1.84
NUP60YAR002W YML6P51998 286 aa3.54□□□□□ -1.84
NUP60YAR002W HOP2P53187 214 aa3.54□□□□□ -1.84
NUP60YAR002W IVY1Q04934 453 aa3.54□□□□□ -1.84
NUP60YAR002W PIG1Q06216 648 aa3.54□□□□□ -1.84
NUP60YAR002W MDM38Q08179 573 aa3.54□□□□□ -1.84
NUP60YAR002W SGT2Q12118 346 aaKnown RBP3.54□□□□□ -1.84
NUP60YAR002W ZPS1Q12512 249 aa3.54□□□□□ -1.84
NUP60YAR002W YOL087CQ99247 1116 aa3.54□□□□□ -1.84
NUP60YAR002W GLT1Q12680 2145 aaKnown RBP3.54□□□□□ -1.84
NUP60YAR002W RAD10P06838 210 aa3.53□□□□□ -1.84
NUP60YAR002W CIT2P08679 460 aa3.53□□□□□ -1.84
NUP60YAR002W TUB3P09734 445 aaKnown RBP3.53□□□□□ -1.84
NUP60YAR002W WHI2P12611 486 aa3.53□□□□□ -1.84
NUP60YAR002W KIN2P13186 1147 aaKnown RBP3.53□□□□□ -1.84
NUP60YAR002W POL3P15436 1097 aa3.53□□□□□ -1.84
NUP60YAR002W CBF1P17106 351 aa3.53□□□□□ -1.84
NUP60YAR002W AEP2P22136 580 aa3.53□□□□□ -1.84
NUP60YAR002W YCR051WP25631 222 aa3.53□□□□□ -1.84
NUP60YAR002W PRR1P28708 518 aa3.53□□□□□ -1.84
NUP60YAR002W HSP78P33416 811 aa3.53□□□□□ -1.84
NUP60YAR002W TRM2P33753 639 aa3.53□□□□□ -1.84
NUP60YAR002W APE3P37302 537 aaKnown RBP3.53□□□□□ -1.84
NUP60YAR002W CCL1P37366 393 aa3.53□□□□□ -1.84
NUP60YAR002W YRO2P38079 344 aa3.53□□□□□ -1.84
NUP60YAR002W POP4P38336 279 aa3.53□□□□□ -1.84
NUP60YAR002W KSP1P38691 1029 aaKnown RBP3.53□□□□□ -1.84
NUP60YAR002W SNZ3P43545 298 aa3.53□□□□□ -1.84
NUP60YAR002W SAD1P43589 448 aa3.53□□□□□ -1.84
NUP60YAR002W SNZ2P53824 298 aa3.53□□□□□ -1.84
NUP60YAR002W GPD1Q00055 391 aaKnown RBP3.53□□□□□ -1.84
NUP60YAR002W NPL3Q01560 414 aaKnown RBP RIP-Chip data3.53□□□□□ -1.84not detected
NUP60YAR002W SHR3Q02774 210 aa3.53□□□□□ -1.84
NUP60YAR002W RSM24Q03976 319 aa3.53□□□□□ -1.84
NUP60YAR002W SXM1Q04175 944 aaKnown RBP3.53□□□□□ -1.84
NUP60YAR002W YLR455WQ06188 304 aa3.53□□□□□ -1.84
NUP60YAR002W SDH5Q08230 162 aa3.53□□□□□ -1.84
NUP60YAR002W MET7Q08645 548 aa3.53□□□□□ -1.84
NUP60YAR002W HBN1Q96VH4 193 aa3.53□□□□□ -1.84
NUP60YAR002W COX4P04037 155 aa3.52□□□□□ -1.85
NUP60YAR002W HEM15P16622 393 aa3.52□□□□□ -1.85
NUP60YAR002W CDC10P25342 322 aaKnown RBP3.52□□□□□ -1.85
NUP60YAR002W SEC1P30619 724 aaKnown RBP3.52□□□□□ -1.85
NUP60YAR002W FUN30P31380 1131 aa3.52□□□□□ -1.85
NUP60YAR002W MRP4P32902 394 aa3.52□□□□□ -1.85
NUP60YAR002W DOM34P33309 386 aa3.52□□□□□ -1.85
NUP60YAR002W LOS1P33418 1100 aaPredicted RBP3.52□□□□□ -1.85
NUP60YAR002W YKR078WP36158 585 aaKnown RBP3.52□□□□□ -1.85
NUP60YAR002W YMC2P38087 329 aa3.52□□□□□ -1.85
NUP60YAR002W YSW1P38280 609 aa3.52□□□□□ -1.85
NUP60YAR002W PCM1P38628 557 aaKnown RBP3.52□□□□□ -1.85
NUP60YAR002W KHA1P40309 873 aa3.52□□□□□ -1.85
NUP60YAR002W DSN1P40568 576 aa3.52□□□□□ -1.85
NUP60YAR002W YGL036WP53185 909 aaPredicted RBP3.52□□□□□ -1.85
NUP60YAR002W MAP1Q01662 387 aaKnown RBP RIP-Chip data3.52□□□□□ -1.85 RIP-Chip
NUP60YAR002W MSC2Q03455 724 aa3.52□□□□□ -1.85
NUP60YAR002W FAR8Q05040 523 aa3.52□□□□□ -1.85
NUP60YAR002W TAF10Q12030 206 aa3.52□□□□□ -1.85
NUP60YAR002W YDR018CQ12185 396 aa3.52□□□□□ -1.85
NUP60YAR002W NCA2Q12374 616 aa3.52□□□□□ -1.85
NUP60YAR002W ATG11Q12527 1178 aa3.52□□□□□ -1.85
NUP60YAR002W JIP3O13555 125 aa3.52□□□□□ -1.85
NUP60YAR002W ILV2P07342 687 aaKnown RBP3.52□□□□□ -1.85
NUP60YAR002W SNA3P14359 133 aa3.52□□□□□ -1.85
NUP60YAR002W PUT4P15380 627 aa3.52□□□□□ -1.85
NUP60YAR002W PRP16P15938 1071 aaPredicted RBP3.52□□□□□ -1.85
NUP60YAR002W SRV2P17555 526 aaKnown RBP3.52□□□□□ -1.85
NUP60YAR002W GLN3P18494 730 aa3.52□□□□□ -1.85
NUP60YAR002W TRX1P22217 103 aaKnown RBP3.52□□□□□ -1.85
NUP60YAR002W MRPL25P23369 157 aa3.52□□□□□ -1.85
NUP60YAR002W MGT1P26188 188 aa3.52□□□□□ -1.85
NUP60YAR002W TPS2P31688 896 aaKnown RBP3.52□□□□□ -1.85
NUP60YAR002W MSS51P32335 436 aa3.52□□□□□ -1.85
NUP60YAR002W EFB1P32471 206 aaKnown RBP3.52□□□□□ -1.85
NUP60YAR002W PPG1P32838 368 aa3.52□□□□□ -1.85
NUP60YAR002W MAC1P35192 417 aa3.52□□□□□ -1.85
NUP60YAR002W NOP4P37838 685 aaKnown RBP3.52□□□□□ -1.85
NUP60YAR002W DUG2P38149 878 aa3.52□□□□□ -1.85
NUP60YAR002W YBR284WP38150 797 aa3.52□□□□□ -1.85
NUP60YAR002W SWC5P38326 303 aa3.52□□□□□ -1.85
NUP60YAR002W YHR054CP38780 354 aa3.52□□□□□ -1.85
NUP60YAR002W MRX1P40050 688 aa3.52□□□□□ -1.85
NUP60YAR002W ARG2P40360 574 aa3.52□□□□□ -1.85
NUP60YAR002W TMA108P40462 946 aa3.52□□□□□ -1.85
NUP60YAR002W YJR054WP47114 497 aa3.52□□□□□ -1.85
NUP60YAR002W HLJ1P48353 224 aa3.52□□□□□ -1.85
NUP60YAR002W ZIP2P53061 704 aa3.52□□□□□ -1.85
NUP60YAR002W MND1P53102 219 aa3.52□□□□□ -1.85
NUP60YAR002W RNH70P53331 553 aa3.52□□□□□ -1.85
NUP60YAR002W YML119WQ03208 357 aa3.52□□□□□ -1.85
NUP60YAR002W CWC21Q03375 135 aaKnown RBP3.52□□□□□ -1.85
NUP60YAR002W YMR027WQ04371 470 aa3.52□□□□□ -1.85
NUP60YAR002W PRM6Q04705 352 aa3.52□□□□□ -1.85
Retrieved 100 of 5,963 RNA–protein pairs in 173.7 ms