RNA–Protein interactions for RNA: ENST00000640554.1

SDHD-209, Transcript of succinate dehydrogenase complex subunit D, humanhuman

TSL 5

Gene SDHD, Length 727 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHD-209ENST00000640554 ARPP21Q9UBL0 812 aaPredicted RBP17.1■□□□□ 0.33
SDHD-209ENST00000640554 MYO5AQ9Y4I1 1855 aaKnown RBP17.1■□□□□ 0.33
SDHD-209ENST00000640554 TRIM75PA6NK02 468 aa17.09■□□□□ 0.33
SDHD-209ENST00000640554 PATL2C9JE40 543 aaKnown RBP17.09■□□□□ 0.33
SDHD-209ENST00000640554 USP17L12C9JPN9 530 aa17.09■□□□□ 0.33
SDHD-209ENST00000640554 USP17L21D6R901 530 aa17.09■□□□□ 0.33
SDHD-209ENST00000640554 PDHXO00330 501 aa17.09■□□□□ 0.33
SDHD-209ENST00000640554 GPAA1O43292 621 aa17.09■□□□□ 0.33
SDHD-209ENST00000640554 SP3Q02447 781 aa17.09■□□□□ 0.33
SDHD-209ENST00000640554 MOGSQ13724 837 aa17.09■□□□□ 0.33
SDHD-209ENST00000640554 RRP1BQ14684 758 aaKnown RBP17.09■□□□□ 0.33
SDHD-209ENST00000640554 ABCB5Q2M3G0 1257 aa17.09■□□□□ 0.33
SDHD-209ENST00000640554 SH3D19Q5HYK7 790 aa17.09■□□□□ 0.33
SDHD-209ENST00000640554 ERO1AQ96HE7 468 aa17.09■□□□□ 0.33
SDHD-209ENST00000640554 CCDC17Q96LX7 622 aa17.09■□□□□ 0.33
SDHD-209ENST00000640554 PARK7Q99497 189 aaKnown RBP17.09■□□□□ 0.33
SDHD-209ENST00000640554 R3HDMLQ9H3Y0 253 aa17.09■□□□□ 0.33
SDHD-209ENST00000640554 HELLSQ9NRZ9 838 aa17.09■□□□□ 0.33
SDHD-209ENST00000640554 ZBTB21Q9ULJ3 1066 aa17.09■□□□□ 0.33
SDHD-209ENST00000640554 LAMB1P07942 1786 aa17.08■□□□□ 0.33
SDHD-209ENST00000640554 GSG1L2A8MUP6 293 aa17.08■□□□□ 0.32
SDHD-209ENST00000640554 CHGBP05060 677 aa17.08■□□□□ 0.32
SDHD-209ENST00000640554 SHMT1P34896 483 aa17.08■□□□□ 0.32
SDHD-209ENST00000640554 BACE1P56817 501 aa17.08■□□□□ 0.32
SDHD-209ENST00000640554 ZNF287Q9HBT7 754 aa17.08■□□□□ 0.32
SDHD-209ENST00000640554 TRIM6-TRIM34B2RNG4 842 aa17.07■□□□□ 0.32
SDHD-209ENST00000640554 USP17L10C9JJH3 530 aa17.07■□□□□ 0.32
SDHD-209ENST00000640554 GH2P01242 217 aa17.07■□□□□ 0.32
SDHD-209ENST00000640554 DGKZQ13574 1117 aa17.07■□□□□ 0.32
SDHD-209ENST00000640554 SLC4A8Q2Y0W8 1093 aa17.07■□□□□ 0.32
SDHD-209ENST00000640554 GPAT2Q6NUI2 795 aa17.07■□□□□ 0.32
SDHD-209ENST00000640554 CTR9Q6PD62 1173 aa17.07■□□□□ 0.32
SDHD-209ENST00000640554 GADL1Q6ZQY3 521 aa17.07■□□□□ 0.32
SDHD-209ENST00000640554 TMOD4Q9NZQ9 345 aa17.07■□□□□ 0.32
SDHD-209ENST00000640554 PNMA3Q9UL41 463 aa17.07■□□□□ 0.32
SDHD-209ENST00000640554 AGTPBP1Q9UPW5 1226 aa17.07■□□□□ 0.32
SDHD-209ENST00000640554 FOCADQ5VW36 1801 aa17.06■□□□□ 0.32
SDHD-209ENST00000640554 HIP1O00291 1037 aa17.06■□□□□ 0.32
SDHD-209ENST00000640554 GDF11O95390 407 aa17.06■□□□□ 0.32
SDHD-209ENST00000640554 APPP05067 770 aa17.06■□□□□ 0.32
SDHD-209ENST00000640554 USP14P54578 494 aa17.06■□□□□ 0.32
SDHD-209ENST00000640554 IFFO2Q5TF58 517 aa17.06■□□□□ 0.32
SDHD-209ENST00000640554 C16orf86Q6ZW13 317 aa17.06■□□□□ 0.32
SDHD-209ENST00000640554 M0R2C6 588 aa17.05■□□□□ 0.32
SDHD-209ENST00000640554 MFAP1P55081 439 aaKnown RBP17.05■□□□□ 0.32
SDHD-209ENST00000640554 KIF22Q14807 665 aa17.05■□□□□ 0.32
SDHD-209ENST00000640554 C17orf99Q6UX52 265 aa17.05■□□□□ 0.32
SDHD-209ENST00000640554 TMEM179Q6ZVK1 233 aa17.05■□□□□ 0.32
SDHD-209ENST00000640554 RILPL2Q969X0 211 aa17.05■□□□□ 0.32
SDHD-209ENST00000640554 GNRH1P01148 92 aa17.04■□□□□ 0.32
SDHD-209ENST00000640554 SLC3A2P08195 630 aaKnown RBP17.04■□□□□ 0.32
SDHD-209ENST00000640554 CYP2D6P10635 497 aa17.04■□□□□ 0.32
SDHD-209ENST00000640554 OSBPP22059 807 aa17.04■□□□□ 0.32
SDHD-209ENST00000640554 TDO2P48775 406 aa17.04■□□□□ 0.32
SDHD-209ENST00000640554 CDK8P49336 464 aa17.04■□□□□ 0.32
SDHD-209ENST00000640554 HMGCS2P54868 508 aa17.04■□□□□ 0.32
SDHD-209ENST00000640554 JAG1P78504 1218 aa17.04■□□□□ 0.32
SDHD-209ENST00000640554 RAB3GAP1Q15042 981 aa17.04■□□□□ 0.32
SDHD-209ENST00000640554 MCMDC2Q4G0Z9 681 aa17.04■□□□□ 0.32
SDHD-209ENST00000640554 USP17L2Q6R6M4 530 aa17.04■□□□□ 0.32
SDHD-209ENST00000640554 CCDC84Q86UT8 332 aaPredicted RBP17.04■□□□□ 0.32
SDHD-209ENST00000640554 IFNL3Q8IZI9 196 aa17.04■□□□□ 0.32
SDHD-209ENST00000640554 MCOLN1Q9GZU1 580 aa17.04■□□□□ 0.32
SDHD-209ENST00000640554 HOXA7P31268 230 aaPredicted RBP17.03■□□□□ 0.32
SDHD-209ENST00000640554 MTMR2Q13614 643 aa17.03■□□□□ 0.32
SDHD-209ENST00000640554 DYNLL2Q96FJ2 89 aa17.03■□□□□ 0.32
SDHD-209ENST00000640554 SEC62Q99442 399 aaKnown RBP17.03■□□□□ 0.32
SDHD-209ENST00000640554 KIAA1683Q9H0B3 1180 aa17.03■□□□□ 0.32
SDHD-209ENST00000640554 NAPBQ9H115 298 aa17.03■□□□□ 0.32
SDHD-209ENST00000640554 FRMD4AQ9P2Q2 1039 aaPredicted RBP17.03■□□□□ 0.32
SDHD-209ENST00000640554 DOCK1Q14185 1865 aa17.03■□□□□ 0.32
SDHD-209ENST00000640554 CDK5RAP2Q96SN8 1893 aa17.02■□□□□ 0.32
SDHD-209ENST00000640554 MINDY4BA8MYZ0 360 aa17.02■□□□□ 0.32
SDHD-209ENST00000640554 MPHOSPH10O00566 681 aaKnown RBP17.02■□□□□ 0.32
SDHD-209ENST00000640554 SDSP20132 328 aa17.02■□□□□ 0.32
SDHD-209ENST00000640554 GCLCP48506 637 aaPredicted RBP17.02■□□□□ 0.32
SDHD-209ENST00000640554 ALX1Q15699 326 aa17.02■□□□□ 0.32
SDHD-209ENST00000640554 FBXO46Q6PJ61 603 aaPredicted RBP17.02■□□□□ 0.32
SDHD-209ENST00000640554 SMCR8Q8TEV9 937 aaPredicted RBP17.02■□□□□ 0.32
SDHD-209ENST00000640554 ABHD8Q96I13 439 aa17.02■□□□□ 0.32
SDHD-209ENST00000640554 C12orf42Q96LP6 360 aa17.02■□□□□ 0.32
SDHD-209ENST00000640554 SH2D4AQ9H788 454 aa17.02■□□□□ 0.32
SDHD-209ENST00000640554 EFCC1Q9HA90 598 aa17.02■□□□□ 0.32
SDHD-209ENST00000640554 MKNK2Q9HBH9 465 aa17.02■□□□□ 0.32
SDHD-209ENST00000640554 CYP2D7A0A087X1C5 515 aa17.01■□□□□ 0.31
SDHD-209ENST00000640554 PRMT2P55345 433 aa17.01■□□□□ 0.31
SDHD-209ENST00000640554 PDE4BQ07343 736 aa17.01■□□□□ 0.31
SDHD-209ENST00000640554 GTF3C2Q8WUA4 911 aaPredicted RBP17.01■□□□□ 0.31
SDHD-209ENST00000640554 FEZ1Q99689 392 aa17.01■□□□□ 0.31
SDHD-209ENST00000640554 KANSL2Q9H9L4 492 aa17.01■□□□□ 0.31
SDHD-209ENST00000640554 MYH1P12882 1939 aa17.01■□□□□ 0.31
SDHD-209ENST00000640554 ROBO3Q96MS0 1386 aa17.01■□□□□ 0.31
SDHD-209ENST00000640554 ADGRA2Q96PE1 1338 aa17■□□□□ 0.31
SDHD-209ENST00000640554 NEFLP07196 543 aa17■□□□□ 0.31
SDHD-209ENST00000640554 CYP2C8P10632 490 aa17■□□□□ 0.31
SDHD-209ENST00000640554 BCRP11274 1271 aa17■□□□□ 0.31
SDHD-209ENST00000640554 HOXD10P28358 340 aa17■□□□□ 0.31
SDHD-209ENST00000640554 LACTBP83111 547 aaPredicted RBP17■□□□□ 0.31
SDHD-209ENST00000640554 SEPT2Q15019 361 aa17■□□□□ 0.31
SDHD-209ENST00000640554 TREML2Q5T2D2 321 aa17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 107.1 ms