RNA–Protein interactions for RNA: ENST00000639487.1

RTTN-215, Transcript of rotatin, humanhuman

TSL 5

Gene RTTN, Length 3,175 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTTN-215ENST00000639487 ZC3H12CQ9C0D7 883 aaKnown RBP7.8□□□□□ -1.16
RTTN-215ENST00000639487 RNF41Q9H4P4 317 aaPredicted RBP7.8□□□□□ -1.16
RTTN-215ENST00000639487 KCNQ5Q9NR82 932 aa7.8□□□□□ -1.16
RTTN-215ENST00000639487 TMEM88BA6NKF7 163 aa7.8□□□□□ -1.16
RTTN-215ENST00000639487 PDE6AP16499 860 aa7.8□□□□□ -1.16
RTTN-215ENST00000639487 CLK2P49760 499 aaKnown RBP7.8□□□□□ -1.16
RTTN-215ENST00000639487 MCMDC2Q4G0Z9 681 aa7.8□□□□□ -1.16
RTTN-215ENST00000639487 SH3BP5LQ7L8J4 393 aa7.8□□□□□ -1.16
RTTN-215ENST00000639487 FASTKD5Q7L8L6 764 aaKnown RBP7.8□□□□□ -1.16
RTTN-215ENST00000639487 ERO1BQ86YB8 467 aa7.8□□□□□ -1.16
RTTN-215ENST00000639487 MB21D2Q8IYB1 491 aaPredicted RBP7.8□□□□□ -1.16
RTTN-215ENST00000639487 WNK4Q96J92 1243 aa7.8□□□□□ -1.16
RTTN-215ENST00000639487 OBSL1O75147 1896 aa7.8□□□□□ -1.16
RTTN-215ENST00000639487 FNDC1Q4ZHG4 1894 aaPredicted RBP7.8□□□□□ -1.16
RTTN-215ENST00000639487 FAM237AA0A1B0GTK4 181 aa7.79□□□□□ -1.16
RTTN-215ENST00000639487 MECOMQ03112 1051 aa7.79□□□□□ -1.16
RTTN-215ENST00000639487 GPR65Q8IYL9 337 aa7.79□□□□□ -1.16
RTTN-215ENST00000639487 NBPF3Q9H094 633 aa7.79□□□□□ -1.16
RTTN-215ENST00000639487 RIOX1Q9H6W3 641 aa7.79□□□□□ -1.16
RTTN-215ENST00000639487 SQORQ9Y6N5 450 aa7.79□□□□□ -1.16
RTTN-215ENST00000639487 PTPRDP23468 1912 aa7.79□□□□□ -1.16
RTTN-215ENST00000639487 CYP3A7-CYP3A51PA0A087WV96 503 aa7.79□□□□□ -1.16
RTTN-215ENST00000639487 GSG1L2A8MUP6 293 aa7.79□□□□□ -1.16
RTTN-215ENST00000639487 CYP3A7P24462 503 aa7.79□□□□□ -1.16
RTTN-215ENST00000639487 SHMT1P34896 483 aa7.79□□□□□ -1.16
RTTN-215ENST00000639487 PABPC4Q13310 644 aaKnown RBP eCLIP7.79□□□□□ -1.16
RTTN-215ENST00000639487 ATL3Q6DD88 541 aa7.79□□□□□ -1.16
RTTN-215ENST00000639487 TTC6Q86TZ1 520 aa7.79□□□□□ -1.16
RTTN-215ENST00000639487 ANKRD13AQ8IZ07 590 aa7.79□□□□□ -1.16
RTTN-215ENST00000639487 JDP2Q8WYK2 163 aa7.79□□□□□ -1.16
RTTN-215ENST00000639487 NAP1L4Q99733 375 aaKnown RBP7.79□□□□□ -1.16
RTTN-215ENST00000639487 TSEN34Q9BSV6 310 aaKnown RBP7.79□□□□□ -1.16
RTTN-215ENST00000639487 USP35Q9P2H5 1018 aa7.79□□□□□ -1.16
RTTN-215ENST00000639487 AGTPBP1Q9UPW5 1226 aa7.79□□□□□ -1.16
RTTN-215ENST00000639487 PLXND1Q9Y4D7 1925 aa7.79□□□□□ -1.16
RTTN-215ENST00000639487 DENND4CQ5VZ89 1909 aa7.79□□□□□ -1.16
RTTN-215ENST00000639487 LDHBP07195 334 aaKnown RBP7.79□□□□□ -1.16
RTTN-215ENST00000639487 GMPSP49915 693 aaPredicted RBP7.79□□□□□ -1.16
RTTN-215ENST00000639487 MKRN4PQ13434 485 aaPredicted RBP7.79□□□□□ -1.16
RTTN-215ENST00000639487 ZNF274Q96GC6 653 aaPredicted RBP7.79□□□□□ -1.16
RTTN-215ENST00000639487 WBP1LQ9NX94 342 aa7.79□□□□□ -1.16
RTTN-215ENST00000639487 PALD1Q9ULE6 856 aa7.79□□□□□ -1.16
RTTN-215ENST00000639487 TMEM265A0A087WTH1 108 aa7.78□□□□□ -1.16
RTTN-215ENST00000639487 A0A0G2JLW4 131 aa7.78□□□□□ -1.16
RTTN-215ENST00000639487 H7C1D1 291 aa7.78□□□□□ -1.16
RTTN-215ENST00000639487 TAF5LO75529 589 aa7.78□□□□□ -1.16
RTTN-215ENST00000639487 NFASCO94856 1347 aa7.78□□□□□ -1.16
RTTN-215ENST00000639487 SLC25A27O95847 323 aa7.78□□□□□ -1.16
RTTN-215ENST00000639487 C7P10643 843 aa7.78□□□□□ -1.16
RTTN-215ENST00000639487 GSPT1P15170 499 aaKnown RBP7.78□□□□□ -1.16
RTTN-215ENST00000639487 CHMLP26374 656 aa7.78□□□□□ -1.16
RTTN-215ENST00000639487 CHRNA5P30532 468 aa7.78□□□□□ -1.16
RTTN-215ENST00000639487 CAP2P40123 477 aa7.78□□□□□ -1.16
RTTN-215ENST00000639487 CAP1Q01518 475 aa7.78□□□□□ -1.16
RTTN-215ENST00000639487 METTL24Q5JXM2 366 aa7.78□□□□□ -1.16
RTTN-215ENST00000639487 C17orf99Q6UX52 265 aa7.78□□□□□ -1.16
RTTN-215ENST00000639487 GNL3Q9BVP2 549 aaKnown RBP eCLIP7.78□□□□□ -1.16
RTTN-215ENST00000639487 KRT23Q9C075 422 aa7.78□□□□□ -1.16
RTTN-215ENST00000639487 PIH1D3Q9NQM4 214 aaKnown RBP7.78□□□□□ -1.16
RTTN-215ENST00000639487 POU2F2P09086 479 aa7.78□□□□□ -1.16
RTTN-215ENST00000639487 SDSP20132 328 aa7.78□□□□□ -1.16
RTTN-215ENST00000639487 SPRYD7Q5W111 196 aa7.78□□□□□ -1.16
RTTN-215ENST00000639487 SAPCD2Q86UD0 394 aa7.78□□□□□ -1.16
RTTN-215ENST00000639487 FAM9BQ8IZU0 186 aa7.78□□□□□ -1.16
RTTN-215ENST00000639487 RDM1Q8NG50 284 aa7.78□□□□□ -1.16
RTTN-215ENST00000639487 CDCA5Q96FF9 252 aa7.78□□□□□ -1.16
RTTN-215ENST00000639487 INTS4Q96HW7 963 aaKnown RBP7.78□□□□□ -1.16
RTTN-215ENST00000639487 CRNKL1Q9BZJ0 848 aaKnown RBP7.78□□□□□ -1.16
RTTN-215ENST00000639487 ZSWIM6Q9HCJ5 1215 aa7.78□□□□□ -1.16
RTTN-215ENST00000639487 COL1A2P08123 1366 aa7.78□□□□□ -1.16
RTTN-215ENST00000639487 PHLPP2Q6ZVD8 1323 aa7.77□□□□□ -1.16
RTTN-215ENST00000639487 NKRFO15226 690 aaKnown RBP eCLIP7.77□□□□□ -1.16
RTTN-215ENST00000639487 PPIP5K2O43314 1243 aa7.77□□□□□ -1.16
RTTN-215ENST00000639487 HSD17B4P51659 736 aa7.77□□□□□ -1.16
RTTN-215ENST00000639487 CUL4AQ13619 759 aa7.77□□□□□ -1.16
RTTN-215ENST00000639487 KIAA1958Q8N8K9 716 aa7.77□□□□□ -1.16
RTTN-215ENST00000639487 ZNF784Q8NCA9 323 aaPredicted RBP7.77□□□□□ -1.16
RTTN-215ENST00000639487 FAM124BQ9H5Z6 455 aaPredicted RBP7.77□□□□□ -1.16
RTTN-215ENST00000639487 DCP1AQ9NPI6 582 aaPredicted RBP7.77□□□□□ -1.16
RTTN-215ENST00000639487 RBM28Q9NW13 759 aaKnown RBP7.77□□□□□ -1.16
RTTN-215ENST00000639487 DHX16O60231 1041 aaKnown RBP7.77□□□□□ -1.17
RTTN-215ENST00000639487 CNMDO75829 334 aa7.77□□□□□ -1.17
RTTN-215ENST00000639487 ZBTB7AO95365 584 aa7.77□□□□□ -1.17
RTTN-215ENST00000639487 MAP3K9P80192 1104 aa7.77□□□□□ -1.17
RTTN-215ENST00000639487 FUT2Q10981 343 aa7.77□□□□□ -1.17
RTTN-215ENST00000639487 NOGQ13253 232 aa7.77□□□□□ -1.17
RTTN-215ENST00000639487 GRM4Q14833 912 aa7.77□□□□□ -1.17
RTTN-215ENST00000639487 ASPRV1Q53RT3 343 aa7.77□□□□□ -1.17
RTTN-215ENST00000639487 COBLL1Q53SF7 1204 aa7.77□□□□□ -1.17
RTTN-215ENST00000639487 CRBNQ96SW2 442 aa7.77□□□□□ -1.17
RTTN-215ENST00000639487 CLSTN1O94985 981 aa7.77□□□□□ -1.17
RTTN-215ENST00000639487 LMOD1P29536 600 aaPredicted RBP7.77□□□□□ -1.17
RTTN-215ENST00000639487 B3GNT9Q6UX72 402 aa7.77□□□□□ -1.17
RTTN-215ENST00000639487 CHST13Q8NET6 341 aa7.77□□□□□ -1.17
RTTN-215ENST00000639487 DNAJC18Q9H819 358 aa7.77□□□□□ -1.17
RTTN-215ENST00000639487 FEM1BQ9UK73 627 aa7.77□□□□□ -1.17
RTTN-215ENST00000639487 PLXNA4Q9HCM2 1894 aa7.77□□□□□ -1.17
RTTN-215ENST00000639487 IREB2P48200 963 aaKnown RBP7.76□□□□□ -1.17
RTTN-215ENST00000639487 ARMC9Q7Z3E5 817 aa7.76□□□□□ -1.17
RTTN-215ENST00000639487 RIOX2Q8IUF8 465 aa7.76□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms