RNA–Protein interactions for RNA: ENST00000638223.1

KCNMA1-228, Transcript of potassium calcium-activated channel subfamily M alpha 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene KCNMA1, Length 4,340 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNMA1-228ENST00000638223 TMEM232C9JQI7 657 aa11.22□□□□□ -0.61
KCNMA1-228ENST00000638223 NTSR2O95665 410 aa11.22□□□□□ -0.61
KCNMA1-228ENST00000638223 USP25Q9UHP3 1055 aa11.22□□□□□ -0.61
KCNMA1-228ENST00000638223 CNTNAP4Q9C0A0 1308 aa11.22□□□□□ -0.61
KCNMA1-228ENST00000638223 KANK3Q6NY19 840 aa11.22□□□□□ -0.61
KCNMA1-228ENST00000638223 TRIM47Q96LD4 638 aa11.22□□□□□ -0.61
KCNMA1-228ENST00000638223 AS3MTQ9HBK9 375 aa11.22□□□□□ -0.61
KCNMA1-228ENST00000638223 A0A1B0GVL5 298 aa11.22□□□□□ -0.61
KCNMA1-228ENST00000638223 CRKP46108 304 aa11.22□□□□□ -0.61
KCNMA1-228ENST00000638223 ADCY7P51828 1080 aa11.22□□□□□ -0.61
KCNMA1-228ENST00000638223 TPCN1Q9ULQ1 816 aa11.22□□□□□ -0.61
KCNMA1-228ENST00000638223 RIPOR2Q9Y4F9 1068 aa11.22□□□□□ -0.61
KCNMA1-228ENST00000638223 SF3B3Q15393 1217 aaKnown RBP11.21□□□□□ -0.61
KCNMA1-228ENST00000638223 SUPT20HL1Q3ZLR7 823 aa11.21□□□□□ -0.61
KCNMA1-228ENST00000638223 SPECC1Q5M775 1068 aa11.21□□□□□ -0.61
KCNMA1-228ENST00000638223 FKBP15Q5T1M5 1219 aa11.21□□□□□ -0.61
KCNMA1-228ENST00000638223 CACNA2D4Q7Z3S7 1137 aa11.21□□□□□ -0.61
KCNMA1-228ENST00000638223 SP8Q8IXZ3 490 aa11.21□□□□□ -0.61
KCNMA1-228ENST00000638223 MNS1Q8NEH6 495 aa11.21□□□□□ -0.61
KCNMA1-228ENST00000638223 FBXO41Q8TF61 875 aa11.21□□□□□ -0.61
KCNMA1-228ENST00000638223 PYM1Q9BRP8 204 aaKnown RBP11.21□□□□□ -0.61
KCNMA1-228ENST00000638223 GINS2Q9Y248 185 aa11.21□□□□□ -0.61
KCNMA1-228ENST00000638223 COL5A2P05997 1499 aaPredicted RBP11.21□□□□□ -0.61
KCNMA1-228ENST00000638223 CCNT1O60563 726 aaKnown RBP11.21□□□□□ -0.61
KCNMA1-228ENST00000638223 RILPL1Q5EBL4 403 aa11.21□□□□□ -0.61
KCNMA1-228ENST00000638223 PTF1AQ7RTS3 328 aa11.21□□□□□ -0.61
KCNMA1-228ENST00000638223 GPKOWQ92917 476 aaPredicted RBP eCLIP11.21□□□□□ -0.61
KCNMA1-228ENST00000638223 CCDC17Q96LX7 622 aa11.21□□□□□ -0.61
KCNMA1-228ENST00000638223 LLPHQ9BRT6 129 aaKnown RBP11.21□□□□□ -0.61
KCNMA1-228ENST00000638223 CYP2D6P10635 497 aa11.21□□□□□ -0.62
KCNMA1-228ENST00000638223 TOP1P11387 765 aaKnown RBP11.21□□□□□ -0.62
KCNMA1-228ENST00000638223 GYS1P13807 737 aa11.21□□□□□ -0.62
KCNMA1-228ENST00000638223 NONOQ15233 471 aaKnown RBP eCLIP11.21□□□□□ -0.62
KCNMA1-228ENST00000638223 STXBP4Q6ZWJ1 553 aa11.21□□□□□ -0.62
KCNMA1-228ENST00000638223 REXO1Q8N1G1 1221 aaKnown RBP11.21□□□□□ -0.62
KCNMA1-228ENST00000638223 CAGE1Q8TC20 777 aa11.21□□□□□ -0.62
KCNMA1-228ENST00000638223 SH3RF3Q8TEJ3 882 aaPredicted RBP11.21□□□□□ -0.62
KCNMA1-228ENST00000638223 SMCO2A6NFE2 343 aa11.21□□□□□ -0.62
KCNMA1-228ENST00000638223 DPEP1P16444 411 aa11.21□□□□□ -0.62
KCNMA1-228ENST00000638223 USP8P40818 1118 aa11.21□□□□□ -0.62
KCNMA1-228ENST00000638223 RABL6Q3YEC7 729 aaPredicted RBP11.21□□□□□ -0.62
KCNMA1-228ENST00000638223 ATG9AQ7Z3C6 839 aa11.21□□□□□ -0.62
KCNMA1-228ENST00000638223 TBC1D16Q8TBP0 767 aa11.21□□□□□ -0.62
KCNMA1-228ENST00000638223 STRBPQ96SI9 672 aaKnown RBP11.21□□□□□ -0.62
KCNMA1-228ENST00000638223 KRI1Q8N9T8 703 aaKnown RBP11.2□□□□□ -0.62
KCNMA1-228ENST00000638223 ZSWIM6Q9HCJ5 1215 aa11.2□□□□□ -0.62
KCNMA1-228ENST00000638223 PI4KBQ9UBF8 816 aa11.2□□□□□ -0.62
KCNMA1-228ENST00000638223 PPP2R5BQ15173 497 aa11.2□□□□□ -0.62
KCNMA1-228ENST00000638223 KLHL40Q2TBA0 621 aa11.2□□□□□ -0.62
KCNMA1-228ENST00000638223 CDC37L1Q7L3B6 337 aa11.2□□□□□ -0.62
KCNMA1-228ENST00000638223 GTF3C6Q969F1 213 aa11.2□□□□□ -0.62
KCNMA1-228ENST00000638223 BRPF3Q9ULD4 1205 aa11.2□□□□□ -0.62
KCNMA1-228ENST00000638223 ZBTB12Q9Y330 459 aaPredicted RBP11.2□□□□□ -0.62
KCNMA1-228ENST00000638223 PXDNQ92626 1479 aa11.2□□□□□ -0.62
KCNMA1-228ENST00000638223 FGFR1OPO95684 399 aaKnown RBP11.2□□□□□ -0.62
KCNMA1-228ENST00000638223 SLC16A2P36021 539 aa11.2□□□□□ -0.62
KCNMA1-228ENST00000638223 CCDC173Q0VFZ6 552 aa11.2□□□□□ -0.62
KCNMA1-228ENST00000638223 STX1AQ16623 288 aa11.2□□□□□ -0.62
KCNMA1-228ENST00000638223 GLIPR1L2Q4G1C9 344 aa11.2□□□□□ -0.62
KCNMA1-228ENST00000638223 LRRC27Q9C0I9 530 aa11.2□□□□□ -0.62
KCNMA1-228ENST00000638223 UBN2Q6ZU65 1347 aa11.19□□□□□ -0.62
KCNMA1-228ENST00000638223 TTC38Q5R3I4 469 aa11.19□□□□□ -0.62
KCNMA1-228ENST00000638223 ANO1Q5XXA6 986 aa11.19□□□□□ -0.62
KCNMA1-228ENST00000638223 KCTD1Q719H9 257 aa11.19□□□□□ -0.62
KCNMA1-228ENST00000638223 SLC44A5Q8NCS7 719 aa11.19□□□□□ -0.62
KCNMA1-228ENST00000638223 LZTS2Q9BRK4 669 aa11.19□□□□□ -0.62
KCNMA1-228ENST00000638223 LUC7LQ9NQ29 371 aaKnown RBP11.19□□□□□ -0.62
KCNMA1-228ENST00000638223 STX17P56962 302 aa11.19□□□□□ -0.62
KCNMA1-228ENST00000638223 CRAMP1Q96RY5 1269 aa11.19□□□□□ -0.62
KCNMA1-228ENST00000638223 INCENPQ9NQS7 918 aa11.19□□□□□ -0.62
KCNMA1-228ENST00000638223 GPHNQ9NQX3 736 aaPredicted RBP11.19□□□□□ -0.62
KCNMA1-228ENST00000638223 STRCP1A6NGW2 1772 aa11.19□□□□□ -0.62
KCNMA1-228ENST00000638223 FAM43AQ8N2R8 423 aa11.19□□□□□ -0.62
KCNMA1-228ENST00000638223 ZSWIM5Q9P217 1185 aa11.19□□□□□ -0.62
KCNMA1-228ENST00000638223 CCT6AP40227 531 aaKnown RBP11.18□□□□□ -0.62
KCNMA1-228ENST00000638223 IQUBQ8NA54 791 aa11.18□□□□□ -0.62
KCNMA1-228ENST00000638223 ZNF274Q96GC6 653 aaPredicted RBP11.18□□□□□ -0.62
KCNMA1-228ENST00000638223 ATP6V0A2Q9Y487 856 aa11.18□□□□□ -0.62
KCNMA1-228ENST00000638223 KDM6AO15550 1401 aaPredicted RBP11.18□□□□□ -0.62
KCNMA1-228ENST00000638223 ITSN1Q15811 1721 aa11.18□□□□□ -0.62
KCNMA1-228ENST00000638223 NOP56O00567 594 aaKnown RBP11.18□□□□□ -0.62
KCNMA1-228ENST00000638223 FAM13AO94988 1023 aa11.18□□□□□ -0.62
KCNMA1-228ENST00000638223 DHX36Q9H2U1 1008 aaKnown RBP11.18□□□□□ -0.62
KCNMA1-228ENST00000638223 EPB41L2O43491 1005 aaKnown RBP11.18□□□□□ -0.62
KCNMA1-228ENST00000638223 SORBS3O60504 671 aa11.18□□□□□ -0.62
KCNMA1-228ENST00000638223 SFPQP23246 707 aaKnown RBP eCLIP11.18□□□□□ -0.62
KCNMA1-228ENST00000638223 SSR1P43307 286 aaKnown RBP11.18□□□□□ -0.62
KCNMA1-228ENST00000638223 TDRD12Q587J7 1177 aaKnown RBP11.18□□□□□ -0.62
KCNMA1-228ENST00000638223 NCAPH2Q6IBW4 605 aa11.18□□□□□ -0.62
KCNMA1-228ENST00000638223 APOA5Q6Q788 366 aa11.18□□□□□ -0.62
KCNMA1-228ENST00000638223 MAEAQ7L5Y9 396 aa11.18□□□□□ -0.62
KCNMA1-228ENST00000638223 KRT25Q7Z3Z0 450 aa11.18□□□□□ -0.62
KCNMA1-228ENST00000638223 NCAPG2Q86XI2 1143 aa11.18□□□□□ -0.62
KCNMA1-228ENST00000638223 FBXO11Q86XK2 927 aa11.18□□□□□ -0.62
KCNMA1-228ENST00000638223 ANKRD35Q8N283 1001 aa11.18□□□□□ -0.62
KCNMA1-228ENST00000638223 SLC16A10Q8TF71 515 aa11.18□□□□□ -0.62
KCNMA1-228ENST00000638223 KANSL2Q9H9L4 492 aa11.18□□□□□ -0.62
KCNMA1-228ENST00000638223 PCDHA1Q9Y5I3 950 aa11.18□□□□□ -0.62
KCNMA1-228ENST00000638223 USP32Q8NFA0 1604 aa11.18□□□□□ -0.62
KCNMA1-228ENST00000638223 PDIA3P30101 505 aaKnown RBP11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms