RNA–Protein interactions for RNA: ENST00000625883.1

CDR1-202, Transcript of cerebellar degeneration related protein 1, humanhuman

BASIC

Gene CDR1, Length 1,485 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDR1-202ENST00000625883 MRPL41Q8IXM3 137 aaKnown RBP6.27□□□□□ -1.41
CDR1-202ENST00000625883 TAB3Q8N5C8 712 aaPredicted RBP6.27□□□□□ -1.41
CDR1-202ENST00000625883 ZNF507Q8TCN5 953 aa6.27□□□□□ -1.41
CDR1-202ENST00000625883 ISL2Q96A47 359 aa6.27□□□□□ -1.41
CDR1-202ENST00000625883 A0A1W2PQH9 124 aa6.26□□□□□ -1.41
CDR1-202ENST00000625883 C1QTNF9BB2RNN3 333 aa6.26□□□□□ -1.41
CDR1-202ENST00000625883 TNFRSF10CO14798 259 aa6.26□□□□□ -1.41
CDR1-202ENST00000625883 ASPAP45381 313 aa6.26□□□□□ -1.41
CDR1-202ENST00000625883 MLECQ14165 292 aa6.26□□□□□ -1.41
CDR1-202ENST00000625883 SLBPQ14493 270 aaKnown RBP eCLIP6.26□□□□□ -1.41
CDR1-202ENST00000625883 BMS1Q14692 1282 aaKnown RBP6.26□□□□□ -1.41
CDR1-202ENST00000625883 MBTPS1Q14703 1052 aa6.26□□□□□ -1.41
CDR1-202ENST00000625883 ZYXQ15942 572 aaKnown RBP6.26□□□□□ -1.41
CDR1-202ENST00000625883 ARSHQ5FYA8 562 aa6.26□□□□□ -1.41
CDR1-202ENST00000625883 TTC6Q86TZ1 520 aa6.26□□□□□ -1.41
CDR1-202ENST00000625883 HID1Q8IV36 788 aa6.26□□□□□ -1.41
CDR1-202ENST00000625883 FAM13CQ8NE31 585 aa6.26□□□□□ -1.41
CDR1-202ENST00000625883 WFDC12Q8WWY7 111 aa6.26□□□□□ -1.41
CDR1-202ENST00000625883 TMEM87BQ96K49 555 aa6.26□□□□□ -1.41
CDR1-202ENST00000625883 UBL7Q96S82 380 aaPredicted RBP6.26□□□□□ -1.41
CDR1-202ENST00000625883 SLC9A7Q96T83 725 aa6.26□□□□□ -1.41
CDR1-202ENST00000625883 TRIM55Q9BYV6 548 aa6.26□□□□□ -1.41
CDR1-202ENST00000625883 SIRPGQ9P1W8 387 aa6.26□□□□□ -1.41
CDR1-202ENST00000625883 K7ELQ4 463 aaPredicted RBP6.25□□□□□ -1.41
CDR1-202ENST00000625883 GLB1P16278 677 aa6.25□□□□□ -1.41
CDR1-202ENST00000625883 GATA4P43694 442 aa6.25□□□□□ -1.41
CDR1-202ENST00000625883 IREB2P48200 963 aaKnown RBP6.25□□□□□ -1.41
CDR1-202ENST00000625883 ADGRE1Q14246 886 aa6.25□□□□□ -1.41
CDR1-202ENST00000625883 CD163Q86VB7 1156 aa6.25□□□□□ -1.41
CDR1-202ENST00000625883 SLFN12Q8IYM2 578 aa6.25□□□□□ -1.41
CDR1-202ENST00000625883 MICAL1Q8TDZ2 1067 aa6.25□□□□□ -1.41
CDR1-202ENST00000625883 MKL1Q969V6 931 aa6.25□□□□□ -1.41
CDR1-202ENST00000625883 FAM46AQ96IP4 442 aaKnown RBP6.25□□□□□ -1.41
CDR1-202ENST00000625883 DPH2Q9BQC3 489 aaPredicted RBP6.25□□□□□ -1.41
CDR1-202ENST00000625883 ACSS3Q9H6R3 686 aa6.25□□□□□ -1.41
CDR1-202ENST00000625883 PIDD1Q9HB75 910 aa6.25□□□□□ -1.41
CDR1-202ENST00000625883 CDK11AQ9UQ88 783 aaPredicted RBP6.25□□□□□ -1.41
CDR1-202ENST00000625883 MSRB2Q9Y3D2 182 aa6.25□□□□□ -1.41
CDR1-202ENST00000625883 R3HCC1Q9Y3T6 440 aaKnown RBP6.25□□□□□ -1.41
CDR1-202ENST00000625883 RNGTTO60942 597 aaKnown RBP6.24□□□□□ -1.41
CDR1-202ENST00000625883 POLR2BP30876 1174 aaKnown RBP6.24□□□□□ -1.41
CDR1-202ENST00000625883 CAP2P40123 477 aa6.24□□□□□ -1.41
CDR1-202ENST00000625883 RASA3Q14644 834 aa6.24□□□□□ -1.41
CDR1-202ENST00000625883 PPP2R5EQ16537 467 aa6.24□□□□□ -1.41
CDR1-202ENST00000625883 DDR2Q16832 855 aa6.24□□□□□ -1.41
CDR1-202ENST00000625883 INTS3Q68E01 1043 aaKnown RBP6.24□□□□□ -1.41
CDR1-202ENST00000625883 SLC6A19Q695T7 634 aa6.24□□□□□ -1.41
CDR1-202ENST00000625883 CDPF1Q6NVV7 123 aa6.24□□□□□ -1.41
CDR1-202ENST00000625883 UNC5AQ6ZN44 842 aa6.24□□□□□ -1.41
CDR1-202ENST00000625883 NOP9Q86U38 636 aaKnown RBP6.24□□□□□ -1.41
CDR1-202ENST00000625883 SMYD4Q8IYR2 804 aaPredicted RBP6.24□□□□□ -1.41
CDR1-202ENST00000625883 KCT2Q8NC54 265 aa6.24□□□□□ -1.41
CDR1-202ENST00000625883 SPOCK3Q9BQ16 436 aa6.24□□□□□ -1.41
CDR1-202ENST00000625883 CEP41Q9BYV8 373 aa6.24□□□□□ -1.41
CDR1-202ENST00000625883 LTBP3Q9NS15 1303 aa6.24□□□□□ -1.41
CDR1-202ENST00000625883 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP6.23□□□□□ -1.41
CDR1-202ENST00000625883 PRAMEF13Q5VWM6 474 aa6.23□□□□□ -1.41
CDR1-202ENST00000625883 LARP1BQ659C4 914 aaKnown RBP6.23□□□□□ -1.41
CDR1-202ENST00000625883 PPP1R3FQ6ZSY5 799 aaPredicted RBP6.23□□□□□ -1.41
CDR1-202ENST00000625883 CDC37L1Q7L3B6 337 aa6.23□□□□□ -1.41
CDR1-202ENST00000625883 DZIP1LQ8IYY4 767 aaKnown RBP6.23□□□□□ -1.41
CDR1-202ENST00000625883 MEGF10Q96KG7 1140 aa6.23□□□□□ -1.41
CDR1-202ENST00000625883 ST7Q9NRC1 585 aa6.23□□□□□ -1.41
CDR1-202ENST00000625883 SNTG2Q9NY99 539 aa6.23□□□□□ -1.41
CDR1-202ENST00000625883 FAM221BA6H8Z2 402 aa6.22□□□□□ -1.41
CDR1-202ENST00000625883 FAM86C2PA6NEL3 165 aa6.22□□□□□ -1.41
CDR1-202ENST00000625883 B2RBV5 119 aa6.22□□□□□ -1.41
CDR1-202ENST00000625883 U2SURPO15042 1029 aaKnown RBP6.22□□□□□ -1.41
CDR1-202ENST00000625883 SART1O43290 800 aaKnown RBP6.22□□□□□ -1.41
CDR1-202ENST00000625883 SMARCA5O60264 1052 aaPredicted RBP6.22□□□□□ -1.41
CDR1-202ENST00000625883 CST3P01034 146 aaPredicted RBP6.22□□□□□ -1.41
CDR1-202ENST00000625883 RAG1P15918 1043 aa6.22□□□□□ -1.41
CDR1-202ENST00000625883 RAB6AP20340 208 aa6.22□□□□□ -1.41
CDR1-202ENST00000625883 CHRNA4P43681 627 aa6.22□□□□□ -1.41
CDR1-202ENST00000625883 YARSP54577 528 aaKnown RBP6.22□□□□□ -1.41
CDR1-202ENST00000625883 NFE2L2Q16236 605 aa6.22□□□□□ -1.41
CDR1-202ENST00000625883 SGO2Q562F6 1265 aa6.22□□□□□ -1.41
CDR1-202ENST00000625883 ARMC10Q8N2F6 343 aa6.22□□□□□ -1.41
CDR1-202ENST00000625883 SEMA6CQ9H3T2 930 aa6.22□□□□□ -1.41
CDR1-202ENST00000625883 MAPK8IP1Q9UQF2 711 aa6.22□□□□□ -1.41
CDR1-202ENST00000625883 RGS13O14921 159 aa6.22□□□□□ -1.41
CDR1-202ENST00000625883 GAS2O43903 313 aaKnown RBP6.22□□□□□ -1.41
CDR1-202ENST00000625883 UBOX5O94941 541 aa6.22□□□□□ -1.41
CDR1-202ENST00000625883 GJB6O95452 261 aa6.22□□□□□ -1.41
CDR1-202ENST00000625883 FXNQ16595 210 aa6.22□□□□□ -1.41
CDR1-202ENST00000625883 ZNF746Q6NUN9 644 aaPredicted RBP6.22□□□□□ -1.41
CDR1-202ENST00000625883 C6orf15Q6UXA7 325 aaPredicted RBP6.22□□□□□ -1.41
CDR1-202ENST00000625883 ARMCX6Q7L4S7 300 aa6.22□□□□□ -1.41
CDR1-202ENST00000625883 TXNRD3Q86VQ6 643 aa6.22□□□□□ -1.41
CDR1-202ENST00000625883 PHF6Q8IWS0 365 aaKnown RBP eCLIP6.22□□□□□ -1.41
CDR1-202ENST00000625883 CYB5D2Q8WUJ1 264 aa6.22□□□□□ -1.41
CDR1-202ENST00000625883 FBLIM1Q8WUP2 373 aa6.22□□□□□ -1.41
CDR1-202ENST00000625883 EZH1Q92800 747 aaPredicted RBP6.22□□□□□ -1.41
CDR1-202ENST00000625883 DEPDC7Q96QD5 511 aa6.22□□□□□ -1.41
CDR1-202ENST00000625883 SRPK1Q96SB4 655 aaKnown RBP6.22□□□□□ -1.41
CDR1-202ENST00000625883 KIF2CQ99661 725 aa6.22□□□□□ -1.41
CDR1-202ENST00000625883 FOXQ1Q9C009 403 aa6.22□□□□□ -1.41
CDR1-202ENST00000625883 PCOLCE2Q9UKZ9 415 aa6.22□□□□□ -1.41
CDR1-202ENST00000625883 DYNC1LI2O43237 492 aaPredicted RBP6.21□□□□□ -1.42
CDR1-202ENST00000625883 USP11P51784 963 aa6.21□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms