RNA–Protein interactions for RNA: ENST00000620502.4

BRCC3-209, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene BRCC3, Length 882 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-209ENST00000620502 NBPF9Q3BBW0 867 aa8.05□□□□□ -1.12
BRCC3-209ENST00000620502 PKDCCQ504Y2 493 aa8.05□□□□□ -1.12
BRCC3-209ENST00000620502 DLK2Q6UY11 383 aa8.05□□□□□ -1.12
BRCC3-209ENST00000620502 CDC37L1Q7L3B6 337 aa8.05□□□□□ -1.12
BRCC3-209ENST00000620502 VPS37DQ86XT2 251 aa8.05□□□□□ -1.12
BRCC3-209ENST00000620502 OGFOD1Q8N543 542 aa8.05□□□□□ -1.12
BRCC3-209ENST00000620502 DNAJC5GQ8N7S2 189 aa8.05□□□□□ -1.12
BRCC3-209ENST00000620502 PNMA1Q8ND90 353 aa8.05□□□□□ -1.12
BRCC3-209ENST00000620502 FAM174AQ8TBP5 190 aa8.05□□□□□ -1.12
BRCC3-209ENST00000620502 OCSTAMPQ9BR26 566 aa8.05□□□□□ -1.12
BRCC3-209ENST00000620502 GLIS2Q9BZE0 524 aaPredicted RBP8.05□□□□□ -1.12
BRCC3-209ENST00000620502 CHMP4BQ9H444 224 aaKnown RBP8.05□□□□□ -1.12
BRCC3-209ENST00000620502 AKAP2Q9Y2D5 859 aa8.05□□□□□ -1.12
BRCC3-209ENST00000620502 COL1A1P02452 1464 aaPredicted RBP8.05□□□□□ -1.12
BRCC3-209ENST00000620502 TRPM7Q96QT4 1865 aa8.04□□□□□ -1.12
BRCC3-209ENST00000620502 ECM29Q5VYK3 1845 aa8.04□□□□□ -1.12
BRCC3-209ENST00000620502 F8W031 263 aaPredicted RBP8.04□□□□□ -1.12
BRCC3-209ENST00000620502 WNT10BO00744 389 aa8.04□□□□□ -1.12
BRCC3-209ENST00000620502 GPR37L1O60883 481 aa8.04□□□□□ -1.12
BRCC3-209ENST00000620502 ALDH1A1P00352 501 aa8.04□□□□□ -1.12
BRCC3-209ENST00000620502 AVPP01185 164 aa8.04□□□□□ -1.12
BRCC3-209ENST00000620502 PHKA1P46020 1223 aa8.04□□□□□ -1.12
BRCC3-209ENST00000620502 CHAF1AQ13111 956 aaPredicted RBP8.04□□□□□ -1.12
BRCC3-209ENST00000620502 MFSD14BQ5SR56 506 aa8.04□□□□□ -1.12
BRCC3-209ENST00000620502 ANGEL2Q5VTE6 544 aaKnown RBP8.04□□□□□ -1.12
BRCC3-209ENST00000620502 CST9Q5W186 159 aa8.04□□□□□ -1.12
BRCC3-209ENST00000620502 CCDC102BQ68D86 513 aa8.04□□□□□ -1.12
BRCC3-209ENST00000620502 USP48Q86UV5 1035 aa8.04□□□□□ -1.12
BRCC3-209ENST00000620502 XAGE2Q96GT9 111 aa8.04□□□□□ -1.12
BRCC3-209ENST00000620502 NEUROD6Q96NK8 337 aa8.04□□□□□ -1.12
BRCC3-209ENST00000620502 GPR108Q9NPR9 543 aa8.04□□□□□ -1.12
BRCC3-209ENST00000620502 GPSM3Q9Y4H4 160 aa8.04□□□□□ -1.12
BRCC3-209ENST00000620502 PCDHAC2Q9Y5I4 1007 aa8.04□□□□□ -1.12
BRCC3-209ENST00000620502 TLL2Q9Y6L7 1015 aa8.04□□□□□ -1.12
BRCC3-209ENST00000620502 TMEM88BA6NKF7 163 aa8.03□□□□□ -1.12
BRCC3-209ENST00000620502 ADM5C9JUS6 153 aa8.03□□□□□ -1.12
BRCC3-209ENST00000620502 FRAT2O75474 233 aaPredicted RBP8.03□□□□□ -1.12
BRCC3-209ENST00000620502 TNNI3KQ59H18 835 aa8.03□□□□□ -1.12
BRCC3-209ENST00000620502 TRMT44Q8IYL2 757 aaKnown RBP8.03□□□□□ -1.12
BRCC3-209ENST00000620502 TBC1D22AQ8WUA7 517 aa8.03□□□□□ -1.12
BRCC3-209ENST00000620502 DCPSQ96C86 337 aaKnown RBP8.03□□□□□ -1.12
BRCC3-209ENST00000620502 PRMT6Q96LA8 375 aaPredicted RBP8.03□□□□□ -1.12
BRCC3-209ENST00000620502 CDK15Q96Q40 435 aa8.03□□□□□ -1.12
BRCC3-209ENST00000620502 ARHGAP9Q9BRR9 750 aa8.03□□□□□ -1.12
BRCC3-209ENST00000620502 GGA3Q9NZ52 723 aa8.03□□□□□ -1.12
BRCC3-209ENST00000620502 HDAC9Q9UKV0 1011 aa8.03□□□□□ -1.12
BRCC3-209ENST00000620502 TTF2Q9UNY4 1162 aaKnown RBP8.03□□□□□ -1.12
BRCC3-209ENST00000620502 EXOC6BQ9Y2D4 811 aa8.03□□□□□ -1.12
BRCC3-209ENST00000620502 FPGT-TNNI3KV9GXZ4 949 aa8.03□□□□□ -1.12
BRCC3-209ENST00000620502 AOX1Q06278 1338 aa8.03□□□□□ -1.12
BRCC3-209ENST00000620502 MAGEB6P1A0A0J9YX57 407 aa8.02□□□□□ -1.13
BRCC3-209ENST00000620502 PTK2Q05397 1052 aa8.02□□□□□ -1.13
BRCC3-209ENST00000620502 OS9Q13438 667 aaPredicted RBP8.02□□□□□ -1.13
BRCC3-209ENST00000620502 RASGRF1Q13972 1273 aa8.02□□□□□ -1.13
BRCC3-209ENST00000620502 DLGAP5Q15398 846 aa8.02□□□□□ -1.13
BRCC3-209ENST00000620502 CFAP100Q494V2 611 aa8.02□□□□□ -1.13
BRCC3-209ENST00000620502 TRAF7Q6Q0C0 670 aa8.02□□□□□ -1.13
BRCC3-209ENST00000620502 KRT26Q7Z3Y9 468 aa8.02□□□□□ -1.13
BRCC3-209ENST00000620502 WDR66Q8TBY9 1149 aa8.02□□□□□ -1.13
BRCC3-209ENST00000620502 RHPN1Q8TCX5 695 aa8.02□□□□□ -1.13
BRCC3-209ENST00000620502 EAF2Q96CJ1 260 aaPredicted RBP8.02□□□□□ -1.13
BRCC3-209ENST00000620502 CRBNQ96SW2 442 aa8.02□□□□□ -1.13
BRCC3-209ENST00000620502 DBNDD2Q9BQY9 259 aa8.02□□□□□ -1.13
BRCC3-209ENST00000620502 MRIQ9BWK5 157 aa8.02□□□□□ -1.13
BRCC3-209ENST00000620502 GNL3LQ9NVN8 582 aaKnown RBP8.02□□□□□ -1.13
BRCC3-209ENST00000620502 SERPINA10Q9UK55 444 aa8.02□□□□□ -1.13
BRCC3-209ENST00000620502 DENND2AQ9ULE3 1009 aa8.02□□□□□ -1.13
BRCC3-209ENST00000620502 SCAF8Q9UPN6 1271 aaKnown RBP8.02□□□□□ -1.13
BRCC3-209ENST00000620502 PDS5AQ29RF7 1337 aaKnown RBP8.02□□□□□ -1.13
BRCC3-209ENST00000620502 PITPNM2Q9BZ72 1349 aa8.02□□□□□ -1.13
BRCC3-209ENST00000620502 SALL1Q9NSC2 1324 aa8.02□□□□□ -1.13
BRCC3-209ENST00000620502 AKAP11Q9UKA4 1901 aa8.01□□□□□ -1.13
BRCC3-209ENST00000620502 APBB1O00213 710 aa8.01□□□□□ -1.13
BRCC3-209ENST00000620502 HMMRO75330 724 aa8.01□□□□□ -1.13
BRCC3-209ENST00000620502 ARID4AP29374 1257 aaPredicted RBP8.01□□□□□ -1.13
BRCC3-209ENST00000620502 CRKP46108 304 aa8.01□□□□□ -1.13
BRCC3-209ENST00000620502 HDLBPQ00341 1268 aaKnown RBP8.01□□□□□ -1.13
BRCC3-209ENST00000620502 MCM6Q14566 821 aa8.01□□□□□ -1.13
BRCC3-209ENST00000620502 HSP90AB4PQ58FF6 505 aa8.01□□□□□ -1.13
BRCC3-209ENST00000620502 ERC1Q8IUD2 1116 aa8.01□□□□□ -1.13
BRCC3-209ENST00000620502 CCDC8Q9H0W5 538 aaPredicted RBP8.01□□□□□ -1.13
BRCC3-209ENST00000620502 TLR7Q9NYK1 1049 aaKnown RBP8.01□□□□□ -1.13
BRCC3-209ENST00000620502 HMG20BQ9P0W2 317 aa8.01□□□□□ -1.13
BRCC3-209ENST00000620502 DBNLQ9UJU6 430 aaKnown RBP8.01□□□□□ -1.13
BRCC3-209ENST00000620502 SUGT1Q9Y2Z0 365 aa8.01□□□□□ -1.13
BRCC3-209ENST00000620502 NDUFB9Q9Y6M9 179 aa8.01□□□□□ -1.13
BRCC3-209ENST00000620502 RAB11FIP3O75154 756 aa8□□□□□ -1.13
BRCC3-209ENST00000620502 CELF2O95319 508 aaKnown RBP8□□□□□ -1.13
BRCC3-209ENST00000620502 PRDX5P30044 214 aa8□□□□□ -1.13
BRCC3-209ENST00000620502 MCAMP43121 646 aa8□□□□□ -1.13
BRCC3-209ENST00000620502 RBM5P52756 815 aaKnown RBP eCLIP8□□□□□ -1.13
BRCC3-209ENST00000620502 GORABQ5T7V8 394 aa8□□□□□ -1.13
BRCC3-209ENST00000620502 HHIPL2Q6UWX4 724 aa8□□□□□ -1.13
BRCC3-209ENST00000620502 PI16Q6UXB8 463 aa8□□□□□ -1.13
BRCC3-209ENST00000620502 CRIPAKQ8N1N5 446 aa8□□□□□ -1.13
BRCC3-209ENST00000620502 SPATA5Q8NB90 893 aa8□□□□□ -1.13
BRCC3-209ENST00000620502 HPS1Q92902 700 aa8□□□□□ -1.13
BRCC3-209ENST00000620502 KLRG1Q96E93 195 aa8□□□□□ -1.13
BRCC3-209ENST00000620502 CDCA5Q96FF9 252 aa8□□□□□ -1.13
BRCC3-209ENST00000620502 ZNF512BQ96KM6 892 aaPredicted RBP8□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms