RNA–Protein interactions for RNA: ENST00000617482.4

C11orf54-215, Transcript of chromosome 11 open reading frame 54, humanhuman

TSL 3 BASIC

Gene C11orf54, Length 2,417 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-215ENST00000617482 SAMSN1Q9NSI8 373 aaKnown RBP13.5□□□□□ -0.25
C11orf54-215ENST00000617482 SRPRBQ9Y5M8 271 aaKnown RBP13.5□□□□□ -0.25
C11orf54-215ENST00000617482 PNPLA7Q6ZV29 1317 aa13.5□□□□□ -0.25
C11orf54-215ENST00000617482 SARSP49591 514 aaKnown RBP13.5□□□□□ -0.25
C11orf54-215ENST00000617482 EIF5P55010 431 aaKnown RBP13.5□□□□□ -0.25
C11orf54-215ENST00000617482 CHRNDQ07001 517 aa13.5□□□□□ -0.25
C11orf54-215ENST00000617482 CCDC152Q4G0S7 254 aa13.5□□□□□ -0.25
C11orf54-215ENST00000617482 TMEM139Q8IV31 216 aa13.5□□□□□ -0.25
C11orf54-215ENST00000617482 MED15Q96RN5 788 aa13.5□□□□□ -0.25
C11orf54-215ENST00000617482 VPS54Q9P1Q0 977 aa13.5□□□□□ -0.25
C11orf54-215ENST00000617482 PRDM1O75626 825 aa13.49□□□□□ -0.25
C11orf54-215ENST00000617482 TUBB4AP04350 444 aa13.49□□□□□ -0.25
C11orf54-215ENST00000617482 MORC3Q14149 939 aa13.49□□□□□ -0.25
C11orf54-215ENST00000617482 ARHGAP29Q52LW3 1261 aa13.49□□□□□ -0.25
C11orf54-215ENST00000617482 INTS5Q6P9B9 1019 aaKnown RBP13.49□□□□□ -0.25
C11orf54-215ENST00000617482 KRT222Q8N1A0 295 aa13.49□□□□□ -0.25
C11orf54-215ENST00000617482 MLKLQ8NB16 471 aa13.49□□□□□ -0.25
C11orf54-215ENST00000617482 SHISA4Q96DD7 197 aa13.49□□□□□ -0.25
C11orf54-215ENST00000617482 AK7Q96M32 723 aa13.49□□□□□ -0.25
C11orf54-215ENST00000617482 BAG1Q99933 345 aaPredicted RBP13.49□□□□□ -0.25
C11orf54-215ENST00000617482 RNF41Q9H4P4 317 aaPredicted RBP13.49□□□□□ -0.25
C11orf54-215ENST00000617482 RAI14Q9P0K7 980 aa13.49□□□□□ -0.25
C11orf54-215ENST00000617482 PPP2R2CQ9Y2T4 447 aa13.49□□□□□ -0.25
C11orf54-215ENST00000617482 SLIT2O94813 1529 aa13.49□□□□□ -0.25
C11orf54-215ENST00000617482 LRP6O75581 1613 aa13.49□□□□□ -0.25
C11orf54-215ENST00000617482 TNKSO95271 1327 aa13.49□□□□□ -0.25
C11orf54-215ENST00000617482 CYP2D7A0A087X1C5 515 aa13.49□□□□□ -0.25
C11orf54-215ENST00000617482 ACTN4O43707 911 aaKnown RBP13.49□□□□□ -0.25
C11orf54-215ENST00000617482 MYO1BO43795 1136 aa13.49□□□□□ -0.25
C11orf54-215ENST00000617482 AFMP43652 599 aa13.49□□□□□ -0.25
C11orf54-215ENST00000617482 AKAP17AQ02040 695 aaKnown RBP13.49□□□□□ -0.25
C11orf54-215ENST00000617482 EARS2Q5JPH6 523 aaKnown RBP13.49□□□□□ -0.25
C11orf54-215ENST00000617482 NT5DC1Q5TFE4 455 aa13.49□□□□□ -0.25
C11orf54-215ENST00000617482 ELOA2Q8IYF1 753 aaPredicted RBP13.49□□□□□ -0.25
C11orf54-215ENST00000617482 DHX58Q96C10 678 aa13.49□□□□□ -0.25
C11orf54-215ENST00000617482 EPSTI1Q96J88 318 aa13.49□□□□□ -0.25
C11orf54-215ENST00000617482 BCCIPQ9P287 314 aaKnown RBP eCLIP13.49□□□□□ -0.25
C11orf54-215ENST00000617482 NIP7Q9Y221 180 aaKnown RBP eCLIP13.49□□□□□ -0.25
C11orf54-215ENST00000617482 PHLPP2Q6ZVD8 1323 aa13.48□□□□□ -0.25
C11orf54-215ENST00000617482 VWA3AA6NCI4 1184 aa13.48□□□□□ -0.25
C11orf54-215ENST00000617482 ARHGAP6O43182 974 aa13.48□□□□□ -0.25
C11orf54-215ENST00000617482 ZSCAN12O43309 604 aa13.48□□□□□ -0.25
C11orf54-215ENST00000617482 ZNF18P17022 549 aa13.48□□□□□ -0.25
C11orf54-215ENST00000617482 CASP1P29466 404 aa13.48□□□□□ -0.25
C11orf54-215ENST00000617482 GYG1P46976 350 aa13.48□□□□□ -0.25
C11orf54-215ENST00000617482 TBX2Q13207 712 aaPredicted RBP13.48□□□□□ -0.25
C11orf54-215ENST00000617482 SPECC1LQ69YQ0 1117 aa13.48□□□□□ -0.25
C11orf54-215ENST00000617482 ZNF579Q8NAF0 562 aaKnown RBP13.48□□□□□ -0.25
C11orf54-215ENST00000617482 ENOX1Q8TC92 643 aaKnown RBP13.48□□□□□ -0.25
C11orf54-215ENST00000617482 CEP131Q9UPN4 1083 aa13.48□□□□□ -0.25
C11orf54-215ENST00000617482 A0A087X0B3 334 aa13.48□□□□□ -0.25
C11orf54-215ENST00000617482 ATP6V1AP38606 617 aa13.48□□□□□ -0.25
C11orf54-215ENST00000617482 CRKLP46109 303 aaKnown RBP13.48□□□□□ -0.25
C11orf54-215ENST00000617482 KLHL10Q6JEL2 608 aa13.48□□□□□ -0.25
C11orf54-215ENST00000617482 TOGARAM2Q6ZUX3 1019 aa13.48□□□□□ -0.25
C11orf54-215ENST00000617482 ZNF771Q7L3S4 317 aaPredicted RBP13.48□□□□□ -0.25
C11orf54-215ENST00000617482 TC2NQ8N9U0 490 aa13.48□□□□□ -0.25
C11orf54-215ENST00000617482 ESR2Q92731 530 aa13.48□□□□□ -0.25
C11orf54-215ENST00000617482 ACSBG1Q96GR2 724 aa13.48□□□□□ -0.25
C11orf54-215ENST00000617482 DACH1Q9UI36 760 aa13.48□□□□□ -0.25
C11orf54-215ENST00000617482 V9GY48 417 aaPredicted RBP13.48□□□□□ -0.25
C11orf54-215ENST00000617482 NID2Q14112 1375 aa13.48□□□□□ -0.25
C11orf54-215ENST00000617482 MYH3P11055 1940 aa13.47□□□□□ -0.25
C11orf54-215ENST00000617482 MAGEB6P1A0A0J9YX57 407 aa13.47□□□□□ -0.25
C11orf54-215ENST00000617482 H2AFXP16104 143 aaPredicted RBP13.47□□□□□ -0.25
C11orf54-215ENST00000617482 SEC23AQ15436 765 aa13.47□□□□□ -0.25
C11orf54-215ENST00000617482 ENAHQ8N8S7 591 aaPredicted RBP13.47□□□□□ -0.25
C11orf54-215ENST00000617482 MNS1Q8NEH6 495 aa13.47□□□□□ -0.25
C11orf54-215ENST00000617482 UBXN4Q92575 508 aa13.47□□□□□ -0.25
C11orf54-215ENST00000617482 CARD6Q9BX69 1037 aa13.47□□□□□ -0.25
C11orf54-215ENST00000617482 DNAJC5Q9H3Z4 198 aa13.47□□□□□ -0.25
C11orf54-215ENST00000617482 ST7Q9NRC1 585 aa13.47□□□□□ -0.25
C11orf54-215ENST00000617482 CCDC87Q9NVE4 849 aa13.47□□□□□ -0.25
C11orf54-215ENST00000617482 NUP98P52948 1817 aa13.47□□□□□ -0.25
C11orf54-215ENST00000617482 TRIM75PA6NK02 468 aa13.47□□□□□ -0.25
C11orf54-215ENST00000617482 CLCN6P51797 869 aa13.47□□□□□ -0.25
C11orf54-215ENST00000617482 STX17P56962 302 aa13.47□□□□□ -0.25
C11orf54-215ENST00000617482 GNG11P61952 73 aa13.47□□□□□ -0.25
C11orf54-215ENST00000617482 DYNLL1P63167 89 aaKnown RBP13.47□□□□□ -0.25
C11orf54-215ENST00000617482 PKN1Q16512 942 aa13.47□□□□□ -0.25
C11orf54-215ENST00000617482 KANK3Q6NY19 840 aa13.47□□□□□ -0.25
C11orf54-215ENST00000617482 NUTM2AQ8IVF1 878 aaPredicted RBP13.47□□□□□ -0.25
C11orf54-215ENST00000617482 WDR24Q96S15 920 aa13.47□□□□□ -0.25
C11orf54-215ENST00000617482 PARP3Q9Y6F1 533 aa13.47□□□□□ -0.25
C11orf54-215ENST00000617482 WNT7AO00755 349 aa13.46□□□□□ -0.25
C11orf54-215ENST00000617482 CAMTA2O94983 1202 aa13.46□□□□□ -0.25
C11orf54-215ENST00000617482 PLEKHA8P1O95397 391 aa13.46□□□□□ -0.25
C11orf54-215ENST00000617482 NOM1Q5C9Z4 860 aaKnown RBP13.46□□□□□ -0.25
C11orf54-215ENST00000617482 ZSCAN10Q96SZ4 725 aaPredicted RBP13.46□□□□□ -0.25
C11orf54-215ENST00000617482 DESI2Q9BSY9 194 aa13.46□□□□□ -0.25
C11orf54-215ENST00000617482 RNF26Q9BY78 433 aaPredicted RBP13.46□□□□□ -0.25
C11orf54-215ENST00000617482 ECM29Q5VYK3 1845 aa13.46□□□□□ -0.25
C11orf54-215ENST00000617482 TEX33O43247 280 aa13.45□□□□□ -0.26
C11orf54-215ENST00000617482 STX10O60499 249 aa13.45□□□□□ -0.26
C11orf54-215ENST00000617482 XBP1P17861 261 aa13.45□□□□□ -0.26
C11orf54-215ENST00000617482 PLCD1P51178 756 aa13.45□□□□□ -0.26
C11orf54-215ENST00000617482 IFIT1BQ5T764 474 aaKnown RBP13.45□□□□□ -0.26
C11orf54-215ENST00000617482 FCHSD1Q86WN1 690 aa13.45□□□□□ -0.26
C11orf54-215ENST00000617482 PIAS4Q8N2W9 510 aaPredicted RBP13.45□□□□□ -0.26
C11orf54-215ENST00000617482 TRIML1Q8N9V2 468 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 85.1 ms