RNA–Protein interactions for RNA: ENST00000617310.4

SMARCA1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, humanhuman

TSL 2

Gene SMARCA1, Length 4,291 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1-205ENST00000617310 ZNF277Q9NRM2 450 aaPredicted RBP11.45□□□□□ -0.58
SMARCA1-205ENST00000617310 KIF13AQ9H1H9 1805 aa11.45□□□□□ -0.58
SMARCA1-205ENST00000617310 H7C1W4 665 aa11.45□□□□□ -0.58
SMARCA1-205ENST00000617310 USO1O60763 962 aaKnown RBP11.45□□□□□ -0.58
SMARCA1-205ENST00000617310 NPR1P16066 1061 aa11.45□□□□□ -0.58
SMARCA1-205ENST00000617310 FAM47CQ5HY64 1035 aa11.45□□□□□ -0.58
SMARCA1-205ENST00000617310 CC2D2BQ6DHV5 1058 aa11.45□□□□□ -0.58
SMARCA1-205ENST00000617310 CERS3Q8IU89 383 aa11.45□□□□□ -0.58
SMARCA1-205ENST00000617310 GLG1Q92896 1179 aa11.45□□□□□ -0.58
SMARCA1-205ENST00000617310 TPCN1Q9ULQ1 816 aa11.45□□□□□ -0.58
SMARCA1-205ENST00000617310 COL15A1P39059 1388 aa11.45□□□□□ -0.58
SMARCA1-205ENST00000617310 BTBD18B2RXH4 712 aa11.44□□□□□ -0.58
SMARCA1-205ENST00000617310 BIRC3Q13489 604 aa11.44□□□□□ -0.58
SMARCA1-205ENST00000617310 UBE3CQ15386 1083 aa11.44□□□□□ -0.58
SMARCA1-205ENST00000617310 NCAPG2Q86XI2 1143 aa11.44□□□□□ -0.58
SMARCA1-205ENST00000617310 ANKRD35Q8N283 1001 aa11.44□□□□□ -0.58
SMARCA1-205ENST00000617310 FERMT2Q96AC1 680 aa11.44□□□□□ -0.58
SMARCA1-205ENST00000617310 IMPG2Q9BZV3 1241 aa11.44□□□□□ -0.58
SMARCA1-205ENST00000617310 PIH1D3Q9NQM4 214 aaKnown RBP11.44□□□□□ -0.58
SMARCA1-205ENST00000617310 GSTTP1A0A1W2PQM5 241 aa11.44□□□□□ -0.58
SMARCA1-205ENST00000617310 ZSCAN12O43309 604 aa11.44□□□□□ -0.58
SMARCA1-205ENST00000617310 INF2Q27J81 1249 aa11.44□□□□□ -0.58
SMARCA1-205ENST00000617310 CLEC4GQ6UXB4 293 aa11.44□□□□□ -0.58
SMARCA1-205ENST00000617310 KCTD1Q719H9 257 aa11.44□□□□□ -0.58
SMARCA1-205ENST00000617310 CHURC1Q8WUH1 139 aa11.44□□□□□ -0.58
SMARCA1-205ENST00000617310 TAOK3Q9H2K8 898 aa11.44□□□□□ -0.58
SMARCA1-205ENST00000617310 GOPCQ9HD26 462 aa11.44□□□□□ -0.58
SMARCA1-205ENST00000617310 PIM2Q9P1W9 311 aa11.44□□□□□ -0.58
SMARCA1-205ENST00000617310 SERPINB13Q9UIV8 391 aa11.44□□□□□ -0.58
SMARCA1-205ENST00000617310 KCNH3Q9ULD8 1083 aa11.44□□□□□ -0.58
SMARCA1-205ENST00000617310 GLI2P10070 1586 aa11.44□□□□□ -0.58
SMARCA1-205ENST00000617310 ARHGEF35A5YM69 484 aa11.44□□□□□ -0.58
SMARCA1-205ENST00000617310 M0R2C6 588 aa11.44□□□□□ -0.58
SMARCA1-205ENST00000617310 PDE4DQ08499 809 aa11.44□□□□□ -0.58
SMARCA1-205ENST00000617310 HERC4Q5GLZ8 1057 aaPredicted RBP11.44□□□□□ -0.58
SMARCA1-205ENST00000617310 CIAPIN1Q6FI81 312 aa11.44□□□□□ -0.58
SMARCA1-205ENST00000617310 LRSAM1Q6UWE0 723 aa11.44□□□□□ -0.58
SMARCA1-205ENST00000617310 SV2BQ7L1I2 683 aa11.44□□□□□ -0.58
SMARCA1-205ENST00000617310 NCBP1Q09161 790 aaKnown RBP11.43□□□□□ -0.58
SMARCA1-205ENST00000617310 DHX37Q8IY37 1157 aaKnown RBP11.43□□□□□ -0.58
SMARCA1-205ENST00000617310 RASGRP4Q8TDF6 673 aa11.43□□□□□ -0.58
SMARCA1-205ENST00000617310 EEF2KMTQ96G04 330 aa11.43□□□□□ -0.58
SMARCA1-205ENST00000617310 MASTLQ96GX5 879 aa11.43□□□□□ -0.58
SMARCA1-205ENST00000617310 TTC12Q9H892 705 aaPredicted RBP11.43□□□□□ -0.58
SMARCA1-205ENST00000617310 CIAO1O76071 339 aa11.43□□□□□ -0.58
SMARCA1-205ENST00000617310 NELFCDQ8IXH7 590 aa11.43□□□□□ -0.58
SMARCA1-205ENST00000617310 A0A0G2JLW4 131 aa11.43□□□□□ -0.58
SMARCA1-205ENST00000617310 PPM1FP49593 454 aaPredicted RBP11.43□□□□□ -0.58
SMARCA1-205ENST00000617310 GNG11P61952 73 aa11.43□□□□□ -0.58
SMARCA1-205ENST00000617310 MECOMQ03112 1051 aa11.43□□□□□ -0.58
SMARCA1-205ENST00000617310 PKP1Q13835 747 aa11.43□□□□□ -0.58
SMARCA1-205ENST00000617310 AOC3Q16853 763 aa11.43□□□□□ -0.58
SMARCA1-205ENST00000617310 ZMYM1Q5SVZ6 1142 aa11.43□□□□□ -0.58
SMARCA1-205ENST00000617310 TDRD3Q9H7E2 651 aaKnown RBP11.43□□□□□ -0.58
SMARCA1-205ENST00000617310 MINPP1Q9UNW1 487 aa11.43□□□□□ -0.58
SMARCA1-205ENST00000617310 CPSF1Q10570 1443 aaKnown RBP11.43□□□□□ -0.58
SMARCA1-205ENST00000617310 MCAMP43121 646 aa11.43□□□□□ -0.58
SMARCA1-205ENST00000617310 RAPGEF1Q13905 1077 aa11.43□□□□□ -0.58
SMARCA1-205ENST00000617310 SEPT7Q16181 437 aaKnown RBP11.43□□□□□ -0.58
SMARCA1-205ENST00000617310 PRR16Q569H4 304 aa11.43□□□□□ -0.58
SMARCA1-205ENST00000617310 TPH2Q8IWU9 490 aa11.43□□□□□ -0.58
SMARCA1-205ENST00000617310 PCDHA1Q9Y5I3 950 aa11.43□□□□□ -0.58
SMARCA1-205ENST00000617310 SYNMO15061 1565 aa11.42□□□□□ -0.58
SMARCA1-205ENST00000617310 CCDC113Q9H0I3 377 aa11.42□□□□□ -0.58
SMARCA1-205ENST00000617310 JADE2Q9NQC1 790 aa11.42□□□□□ -0.58
SMARCA1-205ENST00000617310 IFNKQ9P0W0 207 aa11.42□□□□□ -0.58
SMARCA1-205ENST00000617310 SEMA3EO15041 775 aa11.42□□□□□ -0.58
SMARCA1-205ENST00000617310 BRDTQ58F21 947 aaPredicted RBP11.42□□□□□ -0.58
SMARCA1-205ENST00000617310 EEPD1Q7L9B9 569 aa11.42□□□□□ -0.58
SMARCA1-205ENST00000617310 KIF18AQ8NI77 898 aa11.42□□□□□ -0.58
SMARCA1-205ENST00000617310 PGBD1Q96JS3 809 aa11.42□□□□□ -0.58
SMARCA1-205ENST00000617310 SCAF8Q9UPN6 1271 aaKnown RBP11.42□□□□□ -0.58
SMARCA1-205ENST00000617310 RNF123Q5XPI4 1314 aa11.42□□□□□ -0.58
SMARCA1-205ENST00000617310 GADD45BO75293 160 aaPredicted RBP11.42□□□□□ -0.58
SMARCA1-205ENST00000617310 ADD2P35612 726 aa11.42□□□□□ -0.58
SMARCA1-205ENST00000617310 CYP4A11Q02928 519 aa11.42□□□□□ -0.58
SMARCA1-205ENST00000617310 CALCRLQ16602 461 aa11.42□□□□□ -0.58
SMARCA1-205ENST00000617310 PLCD3Q8N3E9 789 aa11.42□□□□□ -0.58
SMARCA1-205ENST00000617310 RDH13Q8NBN7 331 aa11.42□□□□□ -0.58
SMARCA1-205ENST00000617310 PSTPIP2Q9H939 334 aa11.42□□□□□ -0.58
SMARCA1-205ENST00000617310 BSDC1Q9NW68 430 aaPredicted RBP11.42□□□□□ -0.58
SMARCA1-205ENST00000617310 USP17L3A6NCW0 530 aa11.41□□□□□ -0.58
SMARCA1-205ENST00000617310 USP17L4A6NCW7 530 aa11.41□□□□□ -0.58
SMARCA1-205ENST00000617310 GOLGA6L10A6NI86 522 aa11.41□□□□□ -0.58
SMARCA1-205ENST00000617310 PAFAH1B1P43034 410 aa11.41□□□□□ -0.58
SMARCA1-205ENST00000617310 USP17L1Q7RTZ2 530 aa11.41□□□□□ -0.58
SMARCA1-205ENST00000617310 KRT25Q7Z3Z0 450 aa11.41□□□□□ -0.58
SMARCA1-205ENST00000617310 RNF169Q8NCN4 708 aa11.41□□□□□ -0.58
SMARCA1-205ENST00000617310 GTF3C6Q969F1 213 aa11.41□□□□□ -0.58
SMARCA1-205ENST00000617310 DNAI2Q9GZS0 605 aa11.41□□□□□ -0.58
SMARCA1-205ENST00000617310 VPS16Q9H269 839 aa11.41□□□□□ -0.58
SMARCA1-205ENST00000617310 BLZF1Q9H2G9 400 aa11.41□□□□□ -0.58
SMARCA1-205ENST00000617310 INCENPQ9NQS7 918 aa11.41□□□□□ -0.58
SMARCA1-205ENST00000617310 ATP8A2Q9NTI2 1148 aa11.41□□□□□ -0.58
SMARCA1-205ENST00000617310 CRB1P82279 1406 aa11.41□□□□□ -0.58
SMARCA1-205ENST00000617310 UQCRHLA0A096LP55 91 aa11.41□□□□□ -0.58
SMARCA1-205ENST00000617310 UQCRHP07919 91 aa11.41□□□□□ -0.58
SMARCA1-205ENST00000617310 FAM160A1Q05DH4 1040 aa11.41□□□□□ -0.58
SMARCA1-205ENST00000617310 SPAG1Q07617 926 aa11.41□□□□□ -0.58
SMARCA1-205ENST00000617310 POLA2Q14181 598 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms