RNA–Protein interactions for RNA: ENST00000616550.4

CBWD3-212, Transcript of COBW domain containing 3, humanhuman

TSL 2 BASIC

Gene CBWD3, Length 721 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-212ENST00000616550 DDRGK1Q96HY6 314 aa26.69■■□□□ 1.86
CBWD3-212ENST00000616550 WDR18Q9BV38 432 aa26.69■■□□□ 1.86
CBWD3-212ENST00000616550 PUS7LQ9H0K6 701 aaKnown RBP26.69■■□□□ 1.86
CBWD3-212ENST00000616550 EFCC1Q9HA90 598 aa26.69■■□□□ 1.86
CBWD3-212ENST00000616550 RNF113AO15541 343 aaKnown RBP26.68■■□□□ 1.86
CBWD3-212ENST00000616550 JAG1P78504 1218 aa26.68■■□□□ 1.86
CBWD3-212ENST00000616550 KIF22Q14807 665 aa26.68■■□□□ 1.86
CBWD3-212ENST00000616550 CERKLQ49MI3 558 aaPredicted RBP26.68■■□□□ 1.86
CBWD3-212ENST00000616550 PROCA1Q8NCQ7 364 aaPredicted RBP26.68■■□□□ 1.86
CBWD3-212ENST00000616550 CPA4Q9UI42 421 aa26.68■■□□□ 1.86
CBWD3-212ENST00000616550 ZBTB21Q9ULJ3 1066 aa26.68■■□□□ 1.86
CBWD3-212ENST00000616550 AGTPBP1Q9UPW5 1226 aa26.68■■□□□ 1.86
CBWD3-212ENST00000616550 SLC4A4Q9Y6R1 1079 aa26.68■■□□□ 1.86
CBWD3-212ENST00000616550 HMGCS2P54868 508 aa26.67■■□□□ 1.86
CBWD3-212ENST00000616550 C17orf99Q6UX52 265 aa26.67■■□□□ 1.86
CBWD3-212ENST00000616550 AMOTL1Q8IY63 956 aa26.67■■□□□ 1.86
CBWD3-212ENST00000616550 HPS5Q9UPZ3 1129 aa26.67■■□□□ 1.86
CBWD3-212ENST00000616550 DDX60LQ5H9U9 1706 aaKnown RBP26.67■■□□□ 1.86
CBWD3-212ENST00000616550 GH2P01242 217 aa26.66■■□□□ 1.86
CBWD3-212ENST00000616550 CYP2C8P10632 490 aa26.66■■□□□ 1.86
CBWD3-212ENST00000616550 SHROOM1Q2M3G4 852 aaPredicted RBP26.66■■□□□ 1.86
CBWD3-212ENST00000616550 APPBP2Q92624 585 aa26.66■■□□□ 1.86
CBWD3-212ENST00000616550 SALL3Q9BXA9 1300 aa26.65■■□□□ 1.86
CBWD3-212ENST00000616550 BAZ2AQ9UIF9 1905 aaKnown RBP26.65■■□□□ 1.86
CBWD3-212ENST00000616550 IGHDP01880 384 aa26.65■■□□□ 1.86
CBWD3-212ENST00000616550 BACE1P56817 501 aa26.65■■□□□ 1.86
CBWD3-212ENST00000616550 ABCB5Q2M3G0 1257 aa26.65■■□□□ 1.86
CBWD3-212ENST00000616550 SH3D19Q5HYK7 790 aa26.65■■□□□ 1.86
CBWD3-212ENST00000616550 SMC5Q8IY18 1101 aa26.65■■□□□ 1.86
CBWD3-212ENST00000616550 CABP5Q9NP86 173 aa26.65■■□□□ 1.86
CBWD3-212ENST00000616550 C19orf81C9J6K1 198 aa26.64■■□□□ 1.86
CBWD3-212ENST00000616550 SHMT1P34896 483 aa26.64■■□□□ 1.86
CBWD3-212ENST00000616550 LACTBP83111 547 aaPredicted RBP26.64■■□□□ 1.86
CBWD3-212ENST00000616550 GABPAQ06546 454 aa26.64■■□□□ 1.86
CBWD3-212ENST00000616550 PABPC4Q13310 644 aaKnown RBP eCLIP26.64■■□□□ 1.86
CBWD3-212ENST00000616550 MTMR2Q13614 643 aa26.64■■□□□ 1.86
CBWD3-212ENST00000616550 TREML2Q5T2D2 321 aa26.64■■□□□ 1.86
CBWD3-212ENST00000616550 B4GALNT3Q6L9W6 998 aa26.64■■□□□ 1.86
CBWD3-212ENST00000616550 OSBP2Q969R2 916 aa26.64■■□□□ 1.86
CBWD3-212ENST00000616550 STRBPQ96SI9 672 aaKnown RBP26.64■■□□□ 1.86
CBWD3-212ENST00000616550 FSD1Q9BTV5 496 aa26.64■■□□□ 1.86
CBWD3-212ENST00000616550 TMOD4Q9NZQ9 345 aa26.64■■□□□ 1.86
CBWD3-212ENST00000616550 STAP2Q9UGK3 403 aa26.64■■□□□ 1.86
CBWD3-212ENST00000616550 PNMA3Q9UL41 463 aa26.64■■□□□ 1.86
CBWD3-212ENST00000616550 TAOK2Q9UL54 1235 aa26.64■■□□□ 1.86
CBWD3-212ENST00000616550 PTPN22Q9Y2R2 807 aa26.64■■□□□ 1.86
CBWD3-212ENST00000616550 ADGRA2Q96PE1 1338 aa26.64■■□□□ 1.85
CBWD3-212ENST00000616550 USP17L10C9JJH3 530 aa26.63■■□□□ 1.85
CBWD3-212ENST00000616550 CYP2D6P10635 497 aa26.63■■□□□ 1.85
CBWD3-212ENST00000616550 SMCR8Q8TEV9 937 aaPredicted RBP26.63■■□□□ 1.85
CBWD3-212ENST00000616550 LNPKQ9C0E8 428 aa26.63■■□□□ 1.85
CBWD3-212ENST00000616550 SWAP70Q9UH65 585 aa26.63■■□□□ 1.85
CBWD3-212ENST00000616550 USP17L12C9JPN9 530 aa26.62■■□□□ 1.85
CBWD3-212ENST00000616550 USP17L21D6R901 530 aa26.62■■□□□ 1.85
CBWD3-212ENST00000616550 PDE1AP54750 535 aa26.62■■□□□ 1.85
CBWD3-212ENST00000616550 CAP1Q01518 475 aa26.62■■□□□ 1.85
CBWD3-212ENST00000616550 RAB3GAP1Q15042 981 aa26.62■■□□□ 1.85
CBWD3-212ENST00000616550 LOC285556D6RIA3 1793 aa26.61■■□□□ 1.85
CBWD3-212ENST00000616550 OSBPP22059 807 aa26.61■■□□□ 1.85
CBWD3-212ENST00000616550 EVX2Q03828 476 aa26.61■■□□□ 1.85
CBWD3-212ENST00000616550 C12orf60Q5U649 245 aa26.61■■□□□ 1.85
CBWD3-212ENST00000616550 ARHGAP39Q9C0H5 1083 aa26.61■■□□□ 1.85
CBWD3-212ENST00000616550 GNRH1P01148 92 aa26.6■■□□□ 1.85
CBWD3-212ENST00000616550 BCRP11274 1271 aa26.6■■□□□ 1.85
CBWD3-212ENST00000616550 MPHOSPH10O00566 681 aaKnown RBP26.59■■□□□ 1.85
CBWD3-212ENST00000616550 GPAA1O43292 621 aa26.59■■□□□ 1.85
CBWD3-212ENST00000616550 GNAT2P19087 354 aa26.59■■□□□ 1.85
CBWD3-212ENST00000616550 IRX6P78412 446 aaPredicted RBP26.59■■□□□ 1.85
CBWD3-212ENST00000616550 CTR9Q6PD62 1173 aa26.59■■□□□ 1.85
CBWD3-212ENST00000616550 USP17L2Q6R6M4 530 aa26.59■■□□□ 1.85
CBWD3-212ENST00000616550 CHD1LQ86WJ1 897 aa26.59■■□□□ 1.85
CBWD3-212ENST00000616550 EVI5LQ96CN4 794 aa26.59■■□□□ 1.85
CBWD3-212ENST00000616550 DYNLL2Q96FJ2 89 aa26.59■■□□□ 1.85
CBWD3-212ENST00000616550 MYH8P13535 1937 aa26.59■■□□□ 1.85
CBWD3-212ENST00000616550 CYP2D7A0A087X1C5 515 aa26.58■■□□□ 1.85
CBWD3-212ENST00000616550 GSG1L2A8MUP6 293 aa26.58■■□□□ 1.85
CBWD3-212ENST00000616550 ECM2O94769 699 aaPredicted RBP26.58■■□□□ 1.85
CBWD3-212ENST00000616550 PSMC4P43686 418 aa26.58■■□□□ 1.85
CBWD3-212ENST00000616550 NUCB1Q02818 461 aa26.58■■□□□ 1.85
CBWD3-212ENST00000616550 GIMAP6Q6P9H5 292 aa26.58■■□□□ 1.85
CBWD3-212ENST00000616550 SLC44A5Q8NCS7 719 aa26.58■■□□□ 1.85
CBWD3-212ENST00000616550 FEZ1Q99689 392 aa26.58■■□□□ 1.85
CBWD3-212ENST00000616550 ARPP21Q9UBL0 812 aaPredicted RBP26.58■■□□□ 1.85
CBWD3-212ENST00000616550 M0R2C6 588 aa26.57■■□□□ 1.84
CBWD3-212ENST00000616550 FMNL1O95466 1100 aaPredicted RBP26.57■■□□□ 1.84
CBWD3-212ENST00000616550 APPP05067 770 aa26.56■■□□□ 1.84
CBWD3-212ENST00000616550 HOXD10P28358 340 aa26.56■■□□□ 1.84
CBWD3-212ENST00000616550 CDK8P49336 464 aa26.56■■□□□ 1.84
CBWD3-212ENST00000616550 IRX3P78415 501 aaPredicted RBP26.56■■□□□ 1.84
CBWD3-212ENST00000616550 ASCC2Q9H1I8 757 aaPredicted RBP26.56■■□□□ 1.84
CBWD3-212ENST00000616550 HOXA7P31268 230 aaPredicted RBP26.55■■□□□ 1.84
CBWD3-212ENST00000616550 GUCY1A2P33402 732 aa26.55■■□□□ 1.84
CBWD3-212ENST00000616550 GCLCP48506 637 aaPredicted RBP26.55■■□□□ 1.84
CBWD3-212ENST00000616550 USP14P54578 494 aa26.55■■□□□ 1.84
CBWD3-212ENST00000616550 PRMT2P55345 433 aa26.55■■□□□ 1.84
CBWD3-212ENST00000616550 FCGRTP55899 365 aa26.55■■□□□ 1.84
CBWD3-212ENST00000616550 SEPT2Q15019 361 aa26.55■■□□□ 1.84
CBWD3-212ENST00000616550 ZMYM1Q5SVZ6 1142 aa26.55■■□□□ 1.84
CBWD3-212ENST00000616550 C16orf86Q6ZW13 317 aa26.55■■□□□ 1.84
CBWD3-212ENST00000616550 ANKRD13CQ8N6S4 541 aa26.55■■□□□ 1.84
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms