RNA–Protein interactions for RNA: ENST00000615671.1

GABPB1-212, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

Gene GABPB1, Length 6,266 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-212ENST00000615671 IGSF22Q8N9C0 903 aa20.83■□□□□ 0.93
GABPB1-212ENST00000615671 CCDC110Q8TBZ0 833 aa20.83■□□□□ 0.93
GABPB1-212ENST00000615671 DNM3Q9UQ16 869 aa20.83■□□□□ 0.93
GABPB1-212ENST00000615671 ZNF532Q9HCE3 1301 aa20.83■□□□□ 0.93
GABPB1-212ENST00000615671 CAPN2P17655 700 aa20.83■□□□□ 0.92
GABPB1-212ENST00000615671 CLUL1Q15846 466 aa20.83■□□□□ 0.92
GABPB1-212ENST00000615671 NAA25Q14CX7 972 aa20.83■□□□□ 0.92
GABPB1-212ENST00000615671 ZNF608Q9ULD9 1512 aaPredicted RBP20.83■□□□□ 0.92
GABPB1-212ENST00000615671 ALDH3A1P30838 453 aa20.82■□□□□ 0.92
GABPB1-212ENST00000615671 SEPT14Q6ZU15 432 aa20.82■□□□□ 0.92
GABPB1-212ENST00000615671 KSR1Q8IVT5 923 aa20.82■□□□□ 0.92
GABPB1-212ENST00000615671 GTF3C6Q969F1 213 aa20.82■□□□□ 0.92
GABPB1-212ENST00000615671 SUPT20HQ8NEM7 779 aa20.82■□□□□ 0.92
GABPB1-212ENST00000615671 CTTNBP2NLQ9P2B4 639 aa20.82■□□□□ 0.92
GABPB1-212ENST00000615671 ALAS1P13196 640 aa20.82■□□□□ 0.92
GABPB1-212ENST00000615671 ITKQ08881 620 aa20.82■□□□□ 0.92
GABPB1-212ENST00000615671 YARSP54577 528 aaKnown RBP20.82■□□□□ 0.92
GABPB1-212ENST00000615671 MKRN3Q13064 507 aaKnown RBP20.82■□□□□ 0.92
GABPB1-212ENST00000615671 SUCLG2Q96I99 432 aa20.82■□□□□ 0.92
GABPB1-212ENST00000615671 PTPROQ16827 1216 aa20.82■□□□□ 0.92
GABPB1-212ENST00000615671 FAM173BQ6P4H8 233 aa20.82■□□□□ 0.92
GABPB1-212ENST00000615671 CCDC125Q86Z20 511 aa20.82■□□□□ 0.92
GABPB1-212ENST00000615671 DDX21Q9NR30 783 aaKnown RBP eCLIP20.82■□□□□ 0.92
GABPB1-212ENST00000615671 SAMD15Q9P1V8 674 aa20.82■□□□□ 0.92
GABPB1-212ENST00000615671 LRWD1Q9UFC0 647 aa20.82■□□□□ 0.92
GABPB1-212ENST00000615671 SYNRGQ9UMZ2 1314 aa20.82■□□□□ 0.92
GABPB1-212ENST00000615671 ZBTB24O43167 697 aaPredicted RBP20.81■□□□□ 0.92
GABPB1-212ENST00000615671 NOL3O60936 208 aaKnown RBP20.81■□□□□ 0.92
GABPB1-212ENST00000615671 BAG6P46379 1132 aa20.81■□□□□ 0.92
GABPB1-212ENST00000615671 KIF22Q14807 665 aa20.81■□□□□ 0.92
GABPB1-212ENST00000615671 KRT222Q8N1A0 295 aa20.81■□□□□ 0.92
GABPB1-212ENST00000615671 VAV2P52735 878 aa20.81■□□□□ 0.92
GABPB1-212ENST00000615671 ZNF365Q70YC5 407 aa20.81■□□□□ 0.92
GABPB1-212ENST00000615671 EIF4G3O43432 1585 aaKnown RBP20.81■□□□□ 0.92
GABPB1-212ENST00000615671 SYNJ2BP-COX16A0A087WUM0 186 aa20.81■□□□□ 0.92
GABPB1-212ENST00000615671 COX16Q9P0S2 106 aa20.81■□□□□ 0.92
GABPB1-212ENST00000615671 SEPT10Q9P0V9 454 aa20.81■□□□□ 0.92
GABPB1-212ENST00000615671 TTC36A6NLP5 189 aa20.81■□□□□ 0.92
GABPB1-212ENST00000615671 GPR161Q8N6U8 529 aaKnown RBP20.81■□□□□ 0.92
GABPB1-212ENST00000615671 CCDC26Q8TAB7 109 aa20.81■□□□□ 0.92
GABPB1-212ENST00000615671 NOX5Q96PH1 765 aa20.81■□□□□ 0.92
GABPB1-212ENST00000615671 MMS19Q96T76 1030 aa20.81■□□□□ 0.92
GABPB1-212ENST00000615671 APOL6Q9BWW8 343 aa20.81■□□□□ 0.92
GABPB1-212ENST00000615671 A2MP01023 1474 aa20.81■□□□□ 0.92
GABPB1-212ENST00000615671 VPS54Q9P1Q0 977 aa20.81■□□□□ 0.92
GABPB1-212ENST00000615671 SYCP2Q9BX26 1530 aa20.8■□□□□ 0.92
GABPB1-212ENST00000615671 TFAP4Q01664 338 aa20.8■□□□□ 0.92
GABPB1-212ENST00000615671 SETDB1Q15047 1291 aa20.8■□□□□ 0.92
GABPB1-212ENST00000615671 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP20.8■□□□□ 0.92
GABPB1-212ENST00000615671 SCYL2Q6P3W7 929 aa20.8■□□□□ 0.92
GABPB1-212ENST00000615671 MKRN1Q9UHC7 482 aaKnown RBP20.8■□□□□ 0.92
GABPB1-212ENST00000615671 TEX14Q8IWB6 1497 aa20.8■□□□□ 0.92
GABPB1-212ENST00000615671 GIPC1O14908 333 aa20.8■□□□□ 0.92
GABPB1-212ENST00000615671 KIAA0825Q8IV33 1275 aa20.8■□□□□ 0.92
GABPB1-212ENST00000615671 KLHL7Q8IXQ5 586 aa20.8■□□□□ 0.92
GABPB1-212ENST00000615671 TAB2Q9NYJ8 693 aa20.8■□□□□ 0.92
GABPB1-212ENST00000615671 KCNH3Q9ULD8 1083 aa20.8■□□□□ 0.92
GABPB1-212ENST00000615671 Q3C1V9 767 aa20.8■□□□□ 0.92
GABPB1-212ENST00000615671 NKIRAS1Q9NYS0 192 aa20.8■□□□□ 0.92
GABPB1-212ENST00000615671 CEP85LQ5SZL2 805 aa20.8■□□□□ 0.92
GABPB1-212ENST00000615671 LRRC47Q8N1G4 583 aaKnown RBP20.8■□□□□ 0.92
GABPB1-212ENST00000615671 ABCA10Q8WWZ4 1543 aa20.79■□□□□ 0.92
GABPB1-212ENST00000615671 CYP2J2P51589 502 aa20.79■□□□□ 0.92
GABPB1-212ENST00000615671 SLC52A2Q9HAB3 445 aa20.79■□□□□ 0.92
GABPB1-212ENST00000615671 UTP11Q9Y3A2 253 aaKnown RBP20.79■□□□□ 0.92
GABPB1-212ENST00000615671 A0A1W2PP64 1363 aa20.79■□□□□ 0.92
GABPB1-212ENST00000615671 DYNC1I1O14576 645 aa20.79■□□□□ 0.92
GABPB1-212ENST00000615671 ANO1Q5XXA6 986 aa20.79■□□□□ 0.92
GABPB1-212ENST00000615671 INTS8Q75QN2 995 aaKnown RBP20.79■□□□□ 0.92
GABPB1-212ENST00000615671 TAB3Q8N5C8 712 aaPredicted RBP20.79■□□□□ 0.92
GABPB1-212ENST00000615671 SPC25Q9HBM1 224 aa20.79■□□□□ 0.92
GABPB1-212ENST00000615671 C2CD5Q86YS7 1000 aa20.79■□□□□ 0.92
GABPB1-212ENST00000615671 UTP18Q9Y5J1 556 aaKnown RBP eCLIP20.79■□□□□ 0.92
GABPB1-212ENST00000615671 ALDH1B1P30837 517 aa20.79■□□□□ 0.92
GABPB1-212ENST00000615671 MYL5Q02045 173 aa20.79■□□□□ 0.92
GABPB1-212ENST00000615671 ASIC3Q9UHC3 531 aa20.79■□□□□ 0.92
GABPB1-212ENST00000615671 CETN3O15182 167 aa20.79■□□□□ 0.92
GABPB1-212ENST00000615671 NONOQ15233 471 aaKnown RBP eCLIP20.79■□□□□ 0.926e-6■□□□□ 10
GABPB1-212ENST00000615671 CABP7Q86V35 215 aa20.79■□□□□ 0.92
GABPB1-212ENST00000615671 DIS3L2Q8IYB7 885 aaKnown RBP20.78■□□□□ 0.92
GABPB1-212ENST00000615671 CSRNP2Q9H175 543 aa20.78■□□□□ 0.92
GABPB1-212ENST00000615671 DCTPP1Q9H773 170 aa20.78■□□□□ 0.92
GABPB1-212ENST00000615671 TSTA3Q13630 321 aaPredicted RBP20.78■□□□□ 0.92
GABPB1-212ENST00000615671 NLRX1Q86UT6 975 aa20.78■□□□□ 0.92
GABPB1-212ENST00000615671 THRAP3Q9Y2W1 955 aaKnown RBP20.78■□□□□ 0.92
GABPB1-212ENST00000615671 PAK1Q13153 545 aa20.78■□□□□ 0.92
GABPB1-212ENST00000615671 MFSD14BQ5SR56 506 aa20.78■□□□□ 0.92
GABPB1-212ENST00000615671 MIER3Q7Z3K6 550 aa20.78■□□□□ 0.92
GABPB1-212ENST00000615671 CNGA4Q8IV77 575 aa20.78■□□□□ 0.92
GABPB1-212ENST00000615671 UBL4BQ8N7F7 174 aa20.78■□□□□ 0.92
GABPB1-212ENST00000615671 DCPSQ96C86 337 aaKnown RBP20.78■□□□□ 0.92
GABPB1-212ENST00000615671 FAM193BQ96PV7 902 aaPredicted RBP20.78■□□□□ 0.92
GABPB1-212ENST00000615671 TBC1D10BQ4KMP7 808 aaPredicted RBP20.78■□□□□ 0.92
GABPB1-212ENST00000615671 DPY19L2Q6NUT2 758 aa20.78■□□□□ 0.92
GABPB1-212ENST00000615671 DEPTORQ8TB45 409 aa20.78■□□□□ 0.92
GABPB1-212ENST00000615671 ANGEL1Q9UNK9 670 aaKnown RBP20.77■□□□□ 0.92
GABPB1-212ENST00000615671 CIB2O75838 187 aa20.77■□□□□ 0.92
GABPB1-212ENST00000615671 ARID4AP29374 1257 aaPredicted RBP20.77■□□□□ 0.92
GABPB1-212ENST00000615671 HOOK2Q96ED9 719 aa20.77■□□□□ 0.92
GABPB1-212ENST00000615671 TMEM87BQ96K49 555 aa20.77■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 92.4 ms