RNA–Protein interactions for RNA: ENST00000607632.1

PRDM16-210, Transcript of PR/SET domain 16, humanhuman

TSL 2

Gene PRDM16, Length 581 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM16-210ENST00000607632 ZBTB21Q9ULJ3 1066 aa17.27■□□□□ 0.36
PRDM16-210ENST00000607632 PDHXO00330 501 aa17.26■□□□□ 0.35
PRDM16-210ENST00000607632 SP3Q02447 781 aa17.26■□□□□ 0.35
PRDM16-210ENST00000607632 NUCB1Q02818 461 aa17.26■□□□□ 0.35
PRDM16-210ENST00000607632 SHROOM1Q2M3G4 852 aaPredicted RBP17.26■□□□□ 0.35
PRDM16-210ENST00000607632 C17orf99Q6UX52 265 aa17.26■□□□□ 0.35
PRDM16-210ENST00000607632 TICAM2Q86XR7 235 aa17.26■□□□□ 0.35
PRDM16-210ENST00000607632 ERO1AQ96HE7 468 aa17.26■□□□□ 0.35
PRDM16-210ENST00000607632 AS3MTQ9HBK9 375 aa17.26■□□□□ 0.35
PRDM16-210ENST00000607632 MCM9Q9NXL9 1143 aa17.26■□□□□ 0.35
PRDM16-210ENST00000607632 ZBTB47Q9UFB7 747 aaPredicted RBP17.26■□□□□ 0.35
PRDM16-210ENST00000607632 TRIM75PA6NK02 468 aa17.25■□□□□ 0.35
PRDM16-210ENST00000607632 CAP1Q01518 475 aa17.25■□□□□ 0.35
PRDM16-210ENST00000607632 EVX2Q03828 476 aa17.25■□□□□ 0.35
PRDM16-210ENST00000607632 SPP2Q13103 211 aa17.25■□□□□ 0.35
PRDM16-210ENST00000607632 LRRFIP1Q32MZ4 808 aaKnown RBP17.25■□□□□ 0.35
PRDM16-210ENST00000607632 GIMAP6Q6P9H5 292 aa17.25■□□□□ 0.35
PRDM16-210ENST00000607632 TRIM34Q9BYJ4 488 aa17.25■□□□□ 0.35
PRDM16-210ENST00000607632 OSBPL3Q9H4L5 887 aa17.25■□□□□ 0.35
PRDM16-210ENST00000607632 AGTPBP1Q9UPW5 1226 aa17.25■□□□□ 0.35
PRDM16-210ENST00000607632 MYH8P13535 1937 aa17.24■□□□□ 0.35
PRDM16-210ENST00000607632 GDF11O95390 407 aa17.24■□□□□ 0.35
PRDM16-210ENST00000607632 POLR3DP05423 398 aaPredicted RBP17.24■□□□□ 0.35
PRDM16-210ENST00000607632 SLC4A8Q2Y0W8 1093 aa17.24■□□□□ 0.35
PRDM16-210ENST00000607632 C12orf60Q5U649 245 aa17.24■□□□□ 0.35
PRDM16-210ENST00000607632 OTOP1Q7RTM1 612 aa17.24■□□□□ 0.35
PRDM16-210ENST00000607632 CHD1LQ86WJ1 897 aa17.24■□□□□ 0.35
PRDM16-210ENST00000607632 PARK7Q99497 189 aaKnown RBP17.24■□□□□ 0.35
PRDM16-210ENST00000607632 LNPKQ9C0E8 428 aa17.24■□□□□ 0.35
PRDM16-210ENST00000607632 GSG1L2A8MUP6 293 aa17.23■□□□□ 0.35
PRDM16-210ENST00000607632 CYP2D6P10635 497 aa17.23■□□□□ 0.35
PRDM16-210ENST00000607632 BCRP11274 1271 aa17.23■□□□□ 0.35
PRDM16-210ENST00000607632 BACE1P56817 501 aa17.23■□□□□ 0.35
PRDM16-210ENST00000607632 CERKLQ49MI3 558 aaPredicted RBP17.23■□□□□ 0.35
PRDM16-210ENST00000607632 SBK1Q52WX2 424 aa17.23■□□□□ 0.35
PRDM16-210ENST00000607632 ZMYM1Q5SVZ6 1142 aa17.23■□□□□ 0.35
PRDM16-210ENST00000607632 FBXO46Q6PJ61 603 aaPredicted RBP17.23■□□□□ 0.35
PRDM16-210ENST00000607632 CD99L2Q8TCZ2 262 aa17.23■□□□□ 0.35
PRDM16-210ENST00000607632 SWAP70Q9UH65 585 aa17.23■□□□□ 0.35
PRDM16-210ENST00000607632 SLC4A4Q9Y6R1 1079 aa17.23■□□□□ 0.35
PRDM16-210ENST00000607632 ZSWIM8A7E2V4 1837 aa17.22■□□□□ 0.35
PRDM16-210ENST00000607632 C19orf81C9J6K1 198 aa17.22■□□□□ 0.35
PRDM16-210ENST00000607632 USP17L12C9JPN9 530 aa17.22■□□□□ 0.35
PRDM16-210ENST00000607632 USP17L21D6R901 530 aa17.22■□□□□ 0.35
PRDM16-210ENST00000607632 GPAA1O43292 621 aa17.22■□□□□ 0.35
PRDM16-210ENST00000607632 GH2P01242 217 aa17.22■□□□□ 0.35
PRDM16-210ENST00000607632 GUCY1A2P33402 732 aa17.22■□□□□ 0.35
PRDM16-210ENST00000607632 GADL1Q6ZQY3 521 aa17.22■□□□□ 0.35
PRDM16-210ENST00000607632 EVI5LQ96CN4 794 aa17.22■□□□□ 0.35
PRDM16-210ENST00000607632 ROBO3Q96MS0 1386 aa17.22■□□□□ 0.35
PRDM16-210ENST00000607632 HTTP42858 3142 aa17.22■□□□□ 0.35
PRDM16-210ENST00000607632 GREB1LQ9C091 1923 aaPredicted RBP17.21■□□□□ 0.35
PRDM16-210ENST00000607632 M0R2C6 588 aa17.21■□□□□ 0.35
PRDM16-210ENST00000607632 GNAT2P19087 354 aa17.21■□□□□ 0.35
PRDM16-210ENST00000607632 HMGCS2P54868 508 aa17.21■□□□□ 0.35
PRDM16-210ENST00000607632 LACTBP83111 547 aaPredicted RBP17.21■□□□□ 0.35
PRDM16-210ENST00000607632 ABCB5Q2M3G0 1257 aa17.21■□□□□ 0.35
PRDM16-210ENST00000607632 TREML2Q5T2D2 321 aa17.21■□□□□ 0.35
PRDM16-210ENST00000607632 CTR9Q6PD62 1173 aa17.21■□□□□ 0.35
PRDM16-210ENST00000607632 C16orf86Q6ZW13 317 aa17.21■□□□□ 0.35
PRDM16-210ENST00000607632 PLEKHM2Q8IWE5 1019 aa17.21■□□□□ 0.35
PRDM16-210ENST00000607632 C12orf42Q96LP6 360 aa17.21■□□□□ 0.35
PRDM16-210ENST00000607632 FSD1Q9BTV5 496 aa17.21■□□□□ 0.35
PRDM16-210ENST00000607632 ARPP21Q9UBL0 812 aaPredicted RBP17.21■□□□□ 0.35
PRDM16-210ENST00000607632 USP17L10C9JJH3 530 aa17.2■□□□□ 0.34
PRDM16-210ENST00000607632 SMIM22K7EJ46 135 aa17.2■□□□□ 0.34
PRDM16-210ENST00000607632 CYP2C8P10632 490 aa17.2■□□□□ 0.34
PRDM16-210ENST00000607632 HOXA7P31268 230 aaPredicted RBP17.2■□□□□ 0.34
PRDM16-210ENST00000607632 MTMR2Q13614 643 aa17.2■□□□□ 0.34
PRDM16-210ENST00000607632 B4GALNT3Q6L9W6 998 aa17.2■□□□□ 0.34
PRDM16-210ENST00000607632 SLC44A5Q8NCS7 719 aa17.2■□□□□ 0.34
PRDM16-210ENST00000607632 DDRGK1Q96HY6 314 aa17.2■□□□□ 0.34
PRDM16-210ENST00000607632 EFCC1Q9HA90 598 aa17.2■□□□□ 0.34
PRDM16-210ENST00000607632 EPB41L4AQ9HCS5 686 aaPredicted RBP17.2■□□□□ 0.34
PRDM16-210ENST00000607632 HPS5Q9UPZ3 1129 aa17.2■□□□□ 0.34
PRDM16-210ENST00000607632 TRIM17Q9Y577 477 aa17.2■□□□□ 0.34
PRDM16-210ENST00000607632 MGAMO43451 1857 aa17.2■□□□□ 0.34
PRDM16-210ENST00000607632 CYP2D7A0A087X1C5 515 aa17.19■□□□□ 0.34
PRDM16-210ENST00000607632 DYNLL2Q96FJ2 89 aa17.19■□□□□ 0.34
PRDM16-210ENST00000607632 SEC62Q99442 399 aaKnown RBP17.19■□□□□ 0.34
PRDM16-210ENST00000607632 KIAA1683Q9H0B3 1180 aa17.19■□□□□ 0.34
PRDM16-210ENST00000607632 CABP5Q9NP86 173 aa17.19■□□□□ 0.34
PRDM16-210ENST00000607632 CPA4Q9UI42 421 aa17.19■□□□□ 0.34
PRDM16-210ENST00000607632 PNMA3Q9UL41 463 aa17.19■□□□□ 0.34
PRDM16-210ENST00000607632 PTPN22Q9Y2R2 807 aa17.19■□□□□ 0.34
PRDM16-210ENST00000607632 PATL2C9JE40 543 aaKnown RBP17.18■□□□□ 0.34
PRDM16-210ENST00000607632 GNRH1P01148 92 aa17.18■□□□□ 0.34
PRDM16-210ENST00000607632 CTGFP29279 349 aa17.18■□□□□ 0.34
PRDM16-210ENST00000607632 CDK8P49336 464 aa17.18■□□□□ 0.34
PRDM16-210ENST00000607632 IRX6P78412 446 aaPredicted RBP17.18■□□□□ 0.34
PRDM16-210ENST00000607632 PABPC4Q13310 644 aaKnown RBP eCLIP17.18■□□□□ 0.34
PRDM16-210ENST00000607632 ARHGEF6Q15052 776 aa17.18■□□□□ 0.34
PRDM16-210ENST00000607632 AMOTL1Q8IY63 956 aa17.18■□□□□ 0.34
PRDM16-210ENST00000607632 CCDC17Q96LX7 622 aa17.18■□□□□ 0.34
PRDM16-210ENST00000607632 EMILIN3Q9NT22 766 aa17.18■□□□□ 0.34
PRDM16-210ENST00000607632 FOXP2O15409 715 aa17.17■□□□□ 0.34
PRDM16-210ENST00000607632 USP17L2Q6R6M4 530 aa17.17■□□□□ 0.34
PRDM16-210ENST00000607632 TMEM179Q6ZVK1 233 aa17.17■□□□□ 0.34
PRDM16-210ENST00000607632 ARHGAP39Q9C0H5 1083 aa17.17■□□□□ 0.34
PRDM16-210ENST00000607632 ASCC2Q9H1I8 757 aaPredicted RBP17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms