RNA–Protein interactions for RNA: ENST00000606557.1

SNX5-217, Transcript of sorting nexin 5, humanhuman

BASIC

Gene SNX5, Length 1,087 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX5-217ENST00000606557 IL25Q9H293 177 aa27.54■■■□□ 2
SNX5-217ENST00000606557 GREB1LQ9C091 1923 aaPredicted RBP27.53■■■□□ 2
SNX5-217ENST00000606557 RAD50Q92878 1312 aa27.53■■■□□ 2
SNX5-217ENST00000606557 MANSC4A6NHS7 340 aaPredicted RBP27.53■■■□□ 2
SNX5-217ENST00000606557 IRF6O14896 467 aa27.53■■■□□ 2
SNX5-217ENST00000606557 HSPD1P10809 573 aaKnown RBP27.53■■■□□ 2
SNX5-217ENST00000606557 SHROOM1Q2M3G4 852 aaPredicted RBP27.53■■■□□ 2
SNX5-217ENST00000606557 C16orf86Q6ZW13 317 aa27.53■■■□□ 2
SNX5-217ENST00000606557 REM2Q8IYK8 340 aaPredicted RBP27.53■■■□□ 2
SNX5-217ENST00000606557 ZMYM6O95789 1325 aa27.52■■■□□ 2
SNX5-217ENST00000606557 MINDY4BA8MYZ0 360 aa27.52■■■□□ 2
SNX5-217ENST00000606557 ALX1Q15699 326 aa27.52■■■□□ 2
SNX5-217ENST00000606557 MS4A4AQ96JQ5 239 aa27.52■■■□□ 2
SNX5-217ENST00000606557 GINM1Q9NU53 330 aa27.52■■■□□ 2
SNX5-217ENST00000606557 WBP1LQ9NX94 342 aa27.52■■■□□ 2
SNX5-217ENST00000606557 ZBTB21Q9ULJ3 1066 aa27.52■■■□□ 2
SNX5-217ENST00000606557 LOC285556D6RIA3 1793 aa27.51■■□□□ 1.99
SNX5-217ENST00000606557 ASNSP08243 561 aa27.51■■□□□ 1.99
SNX5-217ENST00000606557 TM4SF4P48230 202 aa27.51■■□□□ 1.99
SNX5-217ENST00000606557 CDK8P49336 464 aa27.51■■□□□ 1.99
SNX5-217ENST00000606557 SREBF2Q12772 1141 aa27.51■■□□□ 1.99
SNX5-217ENST00000606557 CERKLQ49MI3 558 aaPredicted RBP27.51■■□□□ 1.99
SNX5-217ENST00000606557 CCDC84Q86UT8 332 aaPredicted RBP27.51■■□□□ 1.99
SNX5-217ENST00000606557 KCNH4Q9UQ05 1017 aa27.51■■□□□ 1.99
SNX5-217ENST00000606557 ZHX2Q9Y6X8 837 aa27.51■■□□□ 1.99
SNX5-217ENST00000606557 GTF2A2P52657 109 aa27.5■■□□□ 1.99
SNX5-217ENST00000606557 RUFY2Q8WXA3 655 aa27.5■■□□□ 1.99
SNX5-217ENST00000606557 AFG3L2Q9Y4W6 797 aa27.5■■□□□ 1.99
SNX5-217ENST00000606557 TESPA1A2RU30 521 aaPredicted RBP27.49■■□□□ 1.99
SNX5-217ENST00000606557 GH2P01242 217 aa27.49■■□□□ 1.99
SNX5-217ENST00000606557 SNAPC2Q13487 334 aa27.49■■□□□ 1.99
SNX5-217ENST00000606557 USP17L5A8MUK1 530 aa27.48■■□□□ 1.99
SNX5-217ENST00000606557 FGAP02671 866 aa27.48■■□□□ 1.99
SNX5-217ENST00000606557 INHBEP58166 350 aa27.48■■□□□ 1.99
SNX5-217ENST00000606557 PPARAQ07869 468 aa27.48■■□□□ 1.99
SNX5-217ENST00000606557 ABCB5Q2M3G0 1257 aa27.48■■□□□ 1.99
SNX5-217ENST00000606557 TBC1D2Q9BYX2 928 aa27.48■■□□□ 1.99
SNX5-217ENST00000606557 CCL15-CCL14A0A0B4J2E2 113 aa27.47■■□□□ 1.99
SNX5-217ENST00000606557 HSPA1AP0DMV8 641 aaKnown RBP27.47■■□□□ 1.99
SNX5-217ENST00000606557 HSPA1BP0DMV9 641 aaKnown RBP27.47■■□□□ 1.99
SNX5-217ENST00000606557 CCL15Q16663 113 aa27.47■■□□□ 1.99
SNX5-217ENST00000606557 BRI3BPQ8WY22 251 aa27.47■■□□□ 1.99
SNX5-217ENST00000606557 CXCL11O14625 94 aa27.46■■□□□ 1.99
SNX5-217ENST00000606557 SGSM2O43147 1006 aa27.46■■□□□ 1.99
SNX5-217ENST00000606557 STK11IPQ8N1F8 1099 aa27.46■■□□□ 1.99
SNX5-217ENST00000606557 DSCC1Q9BVC3 393 aa27.46■■□□□ 1.99
SNX5-217ENST00000606557 IGF2BP3O00425 579 aaKnown RBP eCLIP27.45■■□□□ 1.98
SNX5-217ENST00000606557 CETPP11597 493 aa27.45■■□□□ 1.98
SNX5-217ENST00000606557 IFNL1Q8IU54 200 aa27.45■■□□□ 1.98
SNX5-217ENST00000606557 ZNF280CQ8ND82 737 aa27.45■■□□□ 1.98
SNX5-217ENST00000606557 PTPN18Q99952 460 aa27.45■■□□□ 1.98
SNX5-217ENST00000606557 BEGAINQ9BUH8 593 aa27.45■■□□□ 1.98
SNX5-217ENST00000606557 AS3MTQ9HBK9 375 aa27.45■■□□□ 1.98
SNX5-217ENST00000606557 CABP5Q9NP86 173 aa27.45■■□□□ 1.98
SNX5-217ENST00000606557 ANAPC4Q9UJX5 808 aa27.45■■□□□ 1.98
SNX5-217ENST00000606557 A0A0G2JLL6 359 aaPredicted RBP27.44■■□□□ 1.98
SNX5-217ENST00000606557 TRIM75PA6NK02 468 aa27.44■■□□□ 1.98
SNX5-217ENST00000606557 AKR1B1P15121 316 aa27.44■■□□□ 1.98
SNX5-217ENST00000606557 RASA1P20936 1047 aa27.44■■□□□ 1.98
SNX5-217ENST00000606557 GUCY1A2P33402 732 aa27.44■■□□□ 1.98
SNX5-217ENST00000606557 PRRT2Q7Z6L0 340 aaPredicted RBP27.44■■□□□ 1.98
SNX5-217ENST00000606557 CCDC17Q96LX7 622 aa27.44■■□□□ 1.98
SNX5-217ENST00000606557 WDR18Q9BV38 432 aa27.44■■□□□ 1.98
SNX5-217ENST00000606557 MPHOSPH10O00566 681 aaKnown RBP27.43■■□□□ 1.98
SNX5-217ENST00000606557 SLC3A2P08195 630 aaKnown RBP27.43■■□□□ 1.98
SNX5-217ENST00000606557 CTDSPL2Q05D32 466 aa27.43■■□□□ 1.98
SNX5-217ENST00000606557 SPP2Q13103 211 aa27.43■■□□□ 1.98
SNX5-217ENST00000606557 MOGSQ13724 837 aa27.43■■□□□ 1.98
SNX5-217ENST00000606557 RNF186Q9NXI6 227 aa27.43■■□□□ 1.98
SNX5-217ENST00000606557 MYH4Q9Y623 1939 aa27.42■■□□□ 1.98
SNX5-217ENST00000606557 CA12O43570 354 aa27.42■■□□□ 1.98
SNX5-217ENST00000606557 SEPT2Q15019 361 aa27.42■■□□□ 1.98
SNX5-217ENST00000606557 RAB3GAP1Q15042 981 aa27.42■■□□□ 1.98
SNX5-217ENST00000606557 TMEM179Q6ZVK1 233 aa27.42■■□□□ 1.98
SNX5-217ENST00000606557 MKNK2Q9HBH9 465 aa27.42■■□□□ 1.98
SNX5-217ENST00000606557 ZNF287Q9HBT7 754 aa27.42■■□□□ 1.98
SNX5-217ENST00000606557 SAGE1Q9NXZ1 904 aa27.42■■□□□ 1.98
SNX5-217ENST00000606557 FOXN1O15353 648 aa27.41■■□□□ 1.98
SNX5-217ENST00000606557 CDC45O75419 566 aa27.41■■□□□ 1.98
SNX5-217ENST00000606557 PDE4BQ07343 736 aa27.41■■□□□ 1.98
SNX5-217ENST00000606557 ESYT1Q9BSJ8 1104 aa27.41■■□□□ 1.98
SNX5-217ENST00000606557 DDX52Q9Y2R4 599 aaKnown RBP eCLIP27.41■■□□□ 1.98
SNX5-217ENST00000606557 PRDM1O75626 825 aa27.4■■□□□ 1.98
SNX5-217ENST00000606557 NBPF3Q9H094 633 aa27.4■■□□□ 1.98
SNX5-217ENST00000606557 TACC3Q9Y6A5 838 aa27.4■■□□□ 1.98
SNX5-217ENST00000606557 BTBD19C9JJ37 291 aa27.39■■□□□ 1.98
SNX5-217ENST00000606557 TRPA1O75762 1119 aa27.39■■□□□ 1.98
SNX5-217ENST00000606557 ALDH1A1P00352 501 aa27.39■■□□□ 1.98
SNX5-217ENST00000606557 HAND2P61296 217 aa27.39■■□□□ 1.98
SNX5-217ENST00000606557 PTH1RQ03431 593 aa27.39■■□□□ 1.98
SNX5-217ENST00000606557 OTUD7BQ6GQQ9 843 aa27.39■■□□□ 1.98
SNX5-217ENST00000606557 FAM43AQ8N2R8 423 aa27.39■■□□□ 1.98
SNX5-217ENST00000606557 FGRP09769 529 aa27.38■■□□□ 1.97
SNX5-217ENST00000606557 BACE1P56817 501 aa27.38■■□□□ 1.97
SNX5-217ENST00000606557 MTMR2Q13614 643 aa27.38■■□□□ 1.97
SNX5-217ENST00000606557 SH3D19Q5HYK7 790 aa27.38■■□□□ 1.97
SNX5-217ENST00000606557 PLIN4Q96Q06 1357 aa27.37■■□□□ 1.97
SNX5-217ENST00000606557 HMGCS2P54868 508 aa27.37■■□□□ 1.97
SNX5-217ENST00000606557 GPAT2Q6NUI2 795 aa27.37■■□□□ 1.97
SNX5-217ENST00000606557 GADL1Q6ZQY3 521 aa27.37■■□□□ 1.97
Retrieved 100 of 20,778 RNA–protein pairs in 86.1 ms