RNA–Protein interactions for RNA: ENST00000604743.5

TUBE1-208, Transcript of tubulin epsilon 1, humanhuman

TSL 3

Gene TUBE1, Length 959 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBE1-208ENST00000604743 ASNSP08243 561 aa17.34■□□□□ 0.37
TUBE1-208ENST00000604743 PDE1AP54750 535 aa17.34■□□□□ 0.37
TUBE1-208ENST00000604743 GPAT2Q6NUI2 795 aa17.34■□□□□ 0.37
TUBE1-208ENST00000604743 APPBP2Q92624 585 aa17.34■□□□□ 0.37
TUBE1-208ENST00000604743 OSBP2Q969R2 916 aa17.34■□□□□ 0.37
TUBE1-208ENST00000604743 ERO1AQ96HE7 468 aa17.34■□□□□ 0.37
TUBE1-208ENST00000604743 EHD4Q9H223 541 aa17.34■□□□□ 0.37
TUBE1-208ENST00000604743 TLR2O60603 784 aa17.33■□□□□ 0.36
TUBE1-208ENST00000604743 GH2P01242 217 aa17.33■□□□□ 0.36
TUBE1-208ENST00000604743 ZFYP08048 801 aaPredicted RBP17.33■□□□□ 0.36
TUBE1-208ENST00000604743 HMGCS2P54868 508 aa17.33■□□□□ 0.36
TUBE1-208ENST00000604743 LRRFIP1Q32MZ4 808 aaKnown RBP17.33■□□□□ 0.36
TUBE1-208ENST00000604743 CERKLQ49MI3 558 aaPredicted RBP17.33■□□□□ 0.36
TUBE1-208ENST00000604743 DDRGK1Q96HY6 314 aa17.33■□□□□ 0.36
TUBE1-208ENST00000604743 ATP8A2Q9NTI2 1148 aa17.33■□□□□ 0.36
TUBE1-208ENST00000604743 CPA4Q9UI42 421 aa17.33■□□□□ 0.36
TUBE1-208ENST00000604743 ZBTB21Q9ULJ3 1066 aa17.33■□□□□ 0.36
TUBE1-208ENST00000604743 TRIM17Q9Y577 477 aa17.33■□□□□ 0.36
TUBE1-208ENST00000604743 CYP2D7A0A087X1C5 515 aa17.32■□□□□ 0.36
TUBE1-208ENST00000604743 CYP2C8P10632 490 aa17.32■□□□□ 0.36
TUBE1-208ENST00000604743 TATDN1Q6P1N9 297 aa17.32■□□□□ 0.36
TUBE1-208ENST00000604743 CHD1LQ86WJ1 897 aa17.32■□□□□ 0.36
TUBE1-208ENST00000604743 AMOTL1Q8IY63 956 aa17.32■□□□□ 0.36
TUBE1-208ENST00000604743 DYNLL2Q96FJ2 89 aa17.32■□□□□ 0.36
TUBE1-208ENST00000604743 STRBPQ96SI9 672 aaKnown RBP17.32■□□□□ 0.36
TUBE1-208ENST00000604743 TBC1D2Q9BYX2 928 aa17.32■□□□□ 0.36
TUBE1-208ENST00000604743 STAP2Q9UGK3 403 aa17.32■□□□□ 0.36
TUBE1-208ENST00000604743 ZSWIM8A7E2V4 1837 aa17.31■□□□□ 0.36
TUBE1-208ENST00000604743 USP17L12C9JPN9 530 aa17.31■□□□□ 0.36
TUBE1-208ENST00000604743 USP17L21D6R901 530 aa17.31■□□□□ 0.36
TUBE1-208ENST00000604743 M0R2C6 588 aa17.31■□□□□ 0.36
TUBE1-208ENST00000604743 MPHOSPH10O00566 681 aaKnown RBP17.31■□□□□ 0.36
TUBE1-208ENST00000604743 SHMT1P34896 483 aa17.31■□□□□ 0.36
TUBE1-208ENST00000604743 NUCB1Q02818 461 aa17.31■□□□□ 0.36
TUBE1-208ENST00000604743 MTMR2Q13614 643 aa17.31■□□□□ 0.36
TUBE1-208ENST00000604743 RAB3GAP1Q15042 981 aa17.31■□□□□ 0.36
TUBE1-208ENST00000604743 ABCB5Q2M3G0 1257 aa17.31■□□□□ 0.36
TUBE1-208ENST00000604743 TREML2Q5T2D2 321 aa17.31■□□□□ 0.36
TUBE1-208ENST00000604743 SLC44A5Q8NCS7 719 aa17.31■□□□□ 0.36
TUBE1-208ENST00000604743 SEC62Q99442 399 aaKnown RBP17.31■□□□□ 0.36
TUBE1-208ENST00000604743 PARK7Q99497 189 aaKnown RBP17.31■□□□□ 0.36
TUBE1-208ENST00000604743 CABP5Q9NP86 173 aa17.31■□□□□ 0.36
TUBE1-208ENST00000604743 SMIM22K7EJ46 135 aa17.3■□□□□ 0.36
TUBE1-208ENST00000604743 GPAA1O43292 621 aa17.3■□□□□ 0.36
TUBE1-208ENST00000604743 PKN2Q16513 984 aaKnown RBP17.3■□□□□ 0.36
TUBE1-208ENST00000604743 OTOP1Q7RTM1 612 aa17.3■□□□□ 0.36
TUBE1-208ENST00000604743 WDR18Q9BV38 432 aa17.3■□□□□ 0.36
TUBE1-208ENST00000604743 EFCC1Q9HA90 598 aa17.3■□□□□ 0.36
TUBE1-208ENST00000604743 GINM1Q9NU53 330 aa17.3■□□□□ 0.36
TUBE1-208ENST00000604743 AGTPBP1Q9UPW5 1226 aa17.3■□□□□ 0.36
TUBE1-208ENST00000604743 LOC285556D6RIA3 1793 aa17.3■□□□□ 0.36
TUBE1-208ENST00000604743 TRIM6-TRIM34B2RNG4 842 aa17.29■□□□□ 0.36
TUBE1-208ENST00000604743 USP17L10C9JJH3 530 aa17.29■□□□□ 0.36
TUBE1-208ENST00000604743 APPP05067 770 aa17.29■□□□□ 0.36
TUBE1-208ENST00000604743 BACE1P56817 501 aa17.29■□□□□ 0.36
TUBE1-208ENST00000604743 CAP1Q01518 475 aa17.29■□□□□ 0.36
TUBE1-208ENST00000604743 GABPAQ06546 454 aa17.29■□□□□ 0.36
TUBE1-208ENST00000604743 KIF22Q14807 665 aa17.29■□□□□ 0.36
TUBE1-208ENST00000604743 ZYXQ15942 572 aaKnown RBP17.29■□□□□ 0.36
TUBE1-208ENST00000604743 CTR9Q6PD62 1173 aa17.29■□□□□ 0.36
TUBE1-208ENST00000604743 C17orf99Q6UX52 265 aa17.29■□□□□ 0.36
TUBE1-208ENST00000604743 STK11IPQ8N1F8 1099 aa17.29■□□□□ 0.36
TUBE1-208ENST00000604743 PROCA1Q8NCQ7 364 aaPredicted RBP17.29■□□□□ 0.36
TUBE1-208ENST00000604743 EVI5LQ96CN4 794 aa17.29■□□□□ 0.36
TUBE1-208ENST00000604743 TMOD4Q9NZQ9 345 aa17.29■□□□□ 0.36
TUBE1-208ENST00000604743 GSG1L2A8MUP6 293 aa17.28■□□□□ 0.36
TUBE1-208ENST00000604743 C12orf60Q5U649 245 aa17.28■□□□□ 0.36
TUBE1-208ENST00000604743 FBXO46Q6PJ61 603 aaPredicted RBP17.28■□□□□ 0.36
TUBE1-208ENST00000604743 SMCR8Q8TEV9 937 aaPredicted RBP17.28■□□□□ 0.36
TUBE1-208ENST00000604743 RILPL2Q969X0 211 aa17.28■□□□□ 0.36
TUBE1-208ENST00000604743 FEZ1Q99689 392 aa17.28■□□□□ 0.36
TUBE1-208ENST00000604743 ARHGAP39Q9C0H5 1083 aa17.28■□□□□ 0.36
TUBE1-208ENST00000604743 SWAP70Q9UH65 585 aa17.28■□□□□ 0.36
TUBE1-208ENST00000604743 HPS5Q9UPZ3 1129 aa17.28■□□□□ 0.36
TUBE1-208ENST00000604743 ADGRA2Q96PE1 1338 aa17.27■□□□□ 0.36
TUBE1-208ENST00000604743 MINDY4BA8MYZ0 360 aa17.27■□□□□ 0.36
TUBE1-208ENST00000604743 GNAT2P19087 354 aa17.27■□□□□ 0.36
TUBE1-208ENST00000604743 TDO2P48775 406 aa17.27■□□□□ 0.36
TUBE1-208ENST00000604743 SEPT2Q15019 361 aa17.27■□□□□ 0.36
TUBE1-208ENST00000604743 SH3D19Q5HYK7 790 aa17.27■□□□□ 0.36
TUBE1-208ENST00000604743 ZMYM1Q5SVZ6 1142 aa17.27■□□□□ 0.36
TUBE1-208ENST00000604743 PLEKHM2Q8IWE5 1019 aa17.27■□□□□ 0.36
TUBE1-208ENST00000604743 ARPP21Q9UBL0 812 aaPredicted RBP17.27■□□□□ 0.36
TUBE1-208ENST00000604743 PNMA3Q9UL41 463 aa17.27■□□□□ 0.36
TUBE1-208ENST00000604743 SLC45A1Q9Y2W3 748 aa17.27■□□□□ 0.36
TUBE1-208ENST00000604743 MGAMO43451 1857 aa17.27■□□□□ 0.35
TUBE1-208ENST00000604743 C19orf81C9J6K1 198 aa17.26■□□□□ 0.35
TUBE1-208ENST00000604743 PATL2C9JE40 543 aaKnown RBP17.26■□□□□ 0.35
TUBE1-208ENST00000604743 OSBPP22059 807 aa17.26■□□□□ 0.35
TUBE1-208ENST00000604743 GUCY1A2P33402 732 aa17.26■□□□□ 0.35
TUBE1-208ENST00000604743 CDK8P49336 464 aa17.26■□□□□ 0.35
TUBE1-208ENST00000604743 LACTBP83111 547 aaPredicted RBP17.26■□□□□ 0.35
TUBE1-208ENST00000604743 PABPC4Q13310 644 aaKnown RBP eCLIP17.26■□□□□ 0.35
TUBE1-208ENST00000604743 ARHGEF6Q15052 776 aa17.26■□□□□ 0.35
TUBE1-208ENST00000604743 CCDC129Q6ZRS4 1044 aa17.26■□□□□ 0.35
TUBE1-208ENST00000604743 ACER1Q8TDN7 264 aa17.26■□□□□ 0.35
TUBE1-208ENST00000604743 AKR1B1P15121 316 aa17.25■□□□□ 0.35
TUBE1-208ENST00000604743 USP17L2Q6R6M4 530 aa17.25■□□□□ 0.35
TUBE1-208ENST00000604743 IFNL3Q8IZI9 196 aa17.25■□□□□ 0.35
TUBE1-208ENST00000604743 EPB41L4AQ9HCS5 686 aaPredicted RBP17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms