RNA–Protein interactions for RNA: ENST00000600523.5

SRRM1-223, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 5

Gene SRRM1, Length 575 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-223ENST00000600523 BMP2KLQ5H9B9 411 aa15.5■□□□□ 0.07
SRRM1-223ENST00000600523 CCDC129Q6ZRS4 1044 aa15.5■□□□□ 0.07
SRRM1-223ENST00000600523 FASTKD5Q7L8L6 764 aaKnown RBP15.5■□□□□ 0.07
SRRM1-223ENST00000600523 ZNF280CQ8ND82 737 aa15.5■□□□□ 0.07
SRRM1-223ENST00000600523 SAGE1Q9NXZ1 904 aa15.5■□□□□ 0.07
SRRM1-223ENST00000600523 GDF11O95390 407 aa15.49■□□□□ 0.07
SRRM1-223ENST00000600523 CYP2D6P10635 497 aa15.49■□□□□ 0.07
SRRM1-223ENST00000600523 CTCFP49711 727 aaPredicted RBP15.49■□□□□ 0.07
SRRM1-223ENST00000600523 GABPAQ06546 454 aa15.49■□□□□ 0.07
SRRM1-223ENST00000600523 RAB3GAP1Q15042 981 aa15.49■□□□□ 0.07
SRRM1-223ENST00000600523 C16orf86Q6ZW13 317 aa15.49■□□□□ 0.07
SRRM1-223ENST00000600523 CNKSR2Q8WXI2 1034 aa15.49■□□□□ 0.07
SRRM1-223ENST00000600523 ZIC5Q96T25 663 aa15.49■□□□□ 0.07
SRRM1-223ENST00000600523 DNAJC18Q9H819 358 aa15.49■□□□□ 0.07
SRRM1-223ENST00000600523 ZBTB21Q9ULJ3 1066 aa15.49■□□□□ 0.07
SRRM1-223ENST00000600523 TRIM75PA6NK02 468 aa15.48■□□□□ 0.07
SRRM1-223ENST00000600523 GH2P01242 217 aa15.48■□□□□ 0.07
SRRM1-223ENST00000600523 SLURP2P0DP57 97 aa15.48■□□□□ 0.07
SRRM1-223ENST00000600523 HSPD1P10809 573 aaKnown RBP15.48■□□□□ 0.07
SRRM1-223ENST00000600523 SHMT1P34896 483 aa15.48■□□□□ 0.07
SRRM1-223ENST00000600523 GJA5P36382 358 aa15.48■□□□□ 0.07
SRRM1-223ENST00000600523 CDK8P49336 464 aa15.48■□□□□ 0.07
SRRM1-223ENST00000600523 ALX1Q15699 326 aa15.48■□□□□ 0.07
SRRM1-223ENST00000600523 KIAA1211Q6ZU35 1233 aa15.48■□□□□ 0.07
SRRM1-223ENST00000600523 TMEM179Q6ZVK1 233 aa15.48■□□□□ 0.07
SRRM1-223ENST00000600523 IFNL1Q8IU54 200 aa15.48■□□□□ 0.07
SRRM1-223ENST00000600523 ZNF444Q8N0Y2 327 aaPredicted RBP15.48■□□□□ 0.07
SRRM1-223ENST00000600523 FEZ1Q99689 392 aa15.48■□□□□ 0.07
SRRM1-223ENST00000600523 EPB41L4AQ9HCS5 686 aaPredicted RBP15.48■□□□□ 0.07
SRRM1-223ENST00000600523 CTNNA3Q9UI47 895 aa15.48■□□□□ 0.07
SRRM1-223ENST00000600523 KCNH4Q9UQ05 1017 aa15.48■□□□□ 0.07
SRRM1-223ENST00000600523 CYP2D7A0A087X1C5 515 aa15.47■□□□□ 0.07
SRRM1-223ENST00000600523 TESPA1A2RU30 521 aaPredicted RBP15.47■□□□□ 0.07
SRRM1-223ENST00000600523 TRPA1O75762 1119 aa15.47■□□□□ 0.07
SRRM1-223ENST00000600523 CHMLP26374 656 aa15.47■□□□□ 0.07
SRRM1-223ENST00000600523 PPARAQ07869 468 aa15.47■□□□□ 0.07
SRRM1-223ENST00000600523 SPP2Q13103 211 aa15.47■□□□□ 0.07
SRRM1-223ENST00000600523 PABPC4Q13310 644 aaKnown RBP eCLIP15.47■□□□□ 0.07
SRRM1-223ENST00000600523 DOCK1Q14185 1865 aa15.47■□□□□ 0.07
SRRM1-223ENST00000600523 DDX60LQ5H9U9 1706 aaKnown RBP15.47■□□□□ 0.07
SRRM1-223ENST00000600523 DYNLL2Q96FJ2 89 aa15.47■□□□□ 0.07
SRRM1-223ENST00000600523 MS4A4AQ96JQ5 239 aa15.47■□□□□ 0.07
SRRM1-223ENST00000600523 WDR18Q9BV38 432 aa15.47■□□□□ 0.07
SRRM1-223ENST00000600523 SH2D4AQ9H788 454 aa15.47■□□□□ 0.07
SRRM1-223ENST00000600523 ZCCHC17Q9NP64 241 aaKnown RBP15.47■□□□□ 0.07
SRRM1-223ENST00000600523 RNF186Q9NXI6 227 aa15.47■□□□□ 0.07
SRRM1-223ENST00000600523 TMOD4Q9NZQ9 345 aa15.47■□□□□ 0.07
SRRM1-223ENST00000600523 AFG3L2Q9Y4W6 797 aa15.47■□□□□ 0.07
SRRM1-223ENST00000600523 ZMYM6O95789 1325 aa15.46■□□□□ 0.07
SRRM1-223ENST00000600523 C19orf81C9J6K1 198 aa15.46■□□□□ 0.07
SRRM1-223ENST00000600523 ZNF589Q86UQ0 364 aaPredicted RBP15.46■□□□□ 0.07
SRRM1-223ENST00000600523 STK11IPQ8N1F8 1099 aa15.46■□□□□ 0.07
SRRM1-223ENST00000600523 DSCC1Q9BVC3 393 aa15.46■□□□□ 0.07
SRRM1-223ENST00000600523 ROBO3Q96MS0 1386 aa15.46■□□□□ 0.07
SRRM1-223ENST00000600523 CEP350Q5VT06 3117 aa15.46■□□□□ 0.06
SRRM1-223ENST00000600523 BAZ2AQ9UIF9 1905 aaKnown RBP15.45■□□□□ 0.06
SRRM1-223ENST00000600523 A0A0G2JLL6 359 aaPredicted RBP15.45■□□□□ 0.06
SRRM1-223ENST00000600523 USP17L10C9JJH3 530 aa15.45■□□□□ 0.06
SRRM1-223ENST00000600523 ZNF213O14771 459 aa15.45■□□□□ 0.06
SRRM1-223ENST00000600523 FGAP02671 866 aa15.45■□□□□ 0.06
SRRM1-223ENST00000600523 PCP11498 1178 aaKnown RBP15.45■□□□□ 0.06
SRRM1-223ENST00000600523 USP14P54578 494 aa15.45■□□□□ 0.06
SRRM1-223ENST00000600523 IMMTQ16891 758 aaKnown RBP15.45■□□□□ 0.06
SRRM1-223ENST00000600523 PPP4R3BQ5MIZ7 849 aa15.45■□□□□ 0.06
SRRM1-223ENST00000600523 VPS53Q5VIR6 699 aa15.45■□□□□ 0.06
SRRM1-223ENST00000600523 GADL1Q6ZQY3 521 aa15.45■□□□□ 0.06
SRRM1-223ENST00000600523 PRRT2Q7Z6L0 340 aaPredicted RBP15.45■□□□□ 0.06
SRRM1-223ENST00000600523 SLC44A5Q8NCS7 719 aa15.45■□□□□ 0.06
SRRM1-223ENST00000600523 BRI3BPQ8WY22 251 aa15.45■□□□□ 0.06
SRRM1-223ENST00000600523 RNF41Q9H4P4 317 aaPredicted RBP15.45■□□□□ 0.06
SRRM1-223ENST00000600523 ZFYVE28Q9HCC9 887 aa15.45■□□□□ 0.06
SRRM1-223ENST00000600523 ARHGEF10LQ9HCE6 1279 aa15.45■□□□□ 0.06
SRRM1-223ENST00000600523 TOMM22Q9NS69 142 aa15.45■□□□□ 0.06
SRRM1-223ENST00000600523 CDC45O75419 566 aa15.44■□□□□ 0.06
SRRM1-223ENST00000600523 BACE1P56817 501 aa15.44■□□□□ 0.06
SRRM1-223ENST00000600523 RRP1BQ14684 758 aaKnown RBP15.44■□□□□ 0.06
SRRM1-223ENST00000600523 ANKRD23Q86SG2 305 aa15.44■□□□□ 0.06
SRRM1-223ENST00000600523 PROCA1Q8NCQ7 364 aaPredicted RBP15.44■□□□□ 0.06
SRRM1-223ENST00000600523 KANSL2Q9H9L4 492 aa15.44■□□□□ 0.06
SRRM1-223ENST00000600523 ANAPC4Q9UJX5 808 aa15.44■□□□□ 0.06
SRRM1-223ENST00000600523 PNMA3Q9UL41 463 aa15.44■□□□□ 0.06
SRRM1-223ENST00000600523 SIPA1L1O43166 1804 aa15.44■□□□□ 0.06
SRRM1-223ENST00000600523 FOXN1O15353 648 aa15.43■□□□□ 0.06
SRRM1-223ENST00000600523 TSPY3P0CV98 308 aa15.43■□□□□ 0.06
SRRM1-223ENST00000600523 TSPY8P0CW00 308 aa15.43■□□□□ 0.06
SRRM1-223ENST00000600523 NT5C2P49902 561 aa15.43■□□□□ 0.06
SRRM1-223ENST00000600523 ICA1Q05084 483 aa15.43■□□□□ 0.06
SRRM1-223ENST00000600523 MTMR2Q13614 643 aa15.43■□□□□ 0.06
SRRM1-223ENST00000600523 SEPT2Q15019 361 aa15.43■□□□□ 0.06
SRRM1-223ENST00000600523 TAF1CQ15572 869 aaPredicted RBP15.43■□□□□ 0.06
SRRM1-223ENST00000600523 USP17L2Q6R6M4 530 aa15.43■□□□□ 0.06
SRRM1-223ENST00000600523 MFSD6Q6ZSS7 791 aa15.43■□□□□ 0.06
SRRM1-223ENST00000600523 CCDC84Q86UT8 332 aaPredicted RBP15.43■□□□□ 0.06
SRRM1-223ENST00000600523 PARK7Q99497 189 aaKnown RBP15.43■□□□□ 0.06
SRRM1-223ENST00000600523 LAMB1P07942 1786 aa15.42■□□□□ 0.06
SRRM1-223ENST00000600523 BTBD19C9JJ37 291 aa15.42■□□□□ 0.06
SRRM1-223ENST00000600523 PDHXO00330 501 aa15.42■□□□□ 0.06
SRRM1-223ENST00000600523 IGF2BP3O00425 579 aaKnown RBP eCLIP15.42■□□□□ 0.06
SRRM1-223ENST00000600523 SGSM2O43147 1006 aa15.42■□□□□ 0.06
SRRM1-223ENST00000600523 AKR1B1P15121 316 aa15.42■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 99.9 ms