RNA–Protein interactions for RNA: ENST00000597453.1

TGFB1-202, Transcript of transforming growth factor beta 1, humanhuman

TSL 1 (best)

Gene TGFB1, Length 392 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFB1-202ENST00000597453 HLA-DOAP06340 250 aa18.45■□□□□ 0.54
TGFB1-202ENST00000597453 BACE1P56817 501 aa18.45■□□□□ 0.54
TGFB1-202ENST00000597453 UBXN2AP68543 259 aa18.45■□□□□ 0.54
TGFB1-202ENST00000597453 MAP3K12Q12852 859 aa18.45■□□□□ 0.54
TGFB1-202ENST00000597453 PABPC4Q13310 644 aaKnown RBP eCLIP18.45■□□□□ 0.54
TGFB1-202ENST00000597453 PDE3AQ14432 1141 aa18.45■□□□□ 0.54
TGFB1-202ENST00000597453 HSP90AB4PQ58FF6 505 aa18.45■□□□□ 0.54
TGFB1-202ENST00000597453 RNF208Q9H0X6 261 aa18.45■□□□□ 0.54
TGFB1-202ENST00000597453 UNC93B1Q9H1C4 597 aa18.45■□□□□ 0.54
TGFB1-202ENST00000597453 ZBTB40Q9NUA8 1239 aa18.45■□□□□ 0.54
TGFB1-202ENST00000597453 DDX19BQ9UMR2 479 aa18.45■□□□□ 0.54
TGFB1-202ENST00000597453 GJB1P08034 283 aa18.44■□□□□ 0.54
TGFB1-202ENST00000597453 USP5P45974 858 aa18.44■□□□□ 0.54
TGFB1-202ENST00000597453 GJA8P48165 433 aa18.44■□□□□ 0.54
TGFB1-202ENST00000597453 GCLCP48506 637 aaPredicted RBP18.44■□□□□ 0.54
TGFB1-202ENST00000597453 IRF5Q13568 498 aa18.44■□□□□ 0.54
TGFB1-202ENST00000597453 RPAP2Q8IXW5 612 aaPredicted RBP18.44■□□□□ 0.54
TGFB1-202ENST00000597453 INHAP05111 366 aa18.43■□□□□ 0.54
TGFB1-202ENST00000597453 COA7Q96BR5 231 aa18.43■□□□□ 0.54
TGFB1-202ENST00000597453 KIF1BPQ96EK5 621 aa18.43■□□□□ 0.54
TGFB1-202ENST00000597453 RIOK1Q9BRS2 568 aaKnown RBP18.43■□□□□ 0.54
TGFB1-202ENST00000597453 TAOK2Q9UL54 1235 aa18.43■□□□□ 0.54
TGFB1-202ENST00000597453 PEX10O60683 326 aa18.42■□□□□ 0.54
TGFB1-202ENST00000597453 TATDN1Q6P1N9 297 aa18.42■□□□□ 0.54
TGFB1-202ENST00000597453 CERS3Q8IU89 383 aa18.42■□□□□ 0.54
TGFB1-202ENST00000597453 CLASRPQ8N2M8 674 aaKnown RBP18.42■□□□□ 0.54
TGFB1-202ENST00000597453 NKX2-3Q8TAU0 364 aa18.42■□□□□ 0.54
TGFB1-202ENST00000597453 PXYLP1Q8TE99 480 aa18.42■□□□□ 0.54
TGFB1-202ENST00000597453 GCC1Q96CN9 775 aa18.42■□□□□ 0.54
TGFB1-202ENST00000597453 BCL11AQ9H165 835 aa18.42■□□□□ 0.54
TGFB1-202ENST00000597453 GINM1Q9NU53 330 aa18.42■□□□□ 0.54
TGFB1-202ENST00000597453 TMOD4Q9NZQ9 345 aa18.42■□□□□ 0.54
TGFB1-202ENST00000597453 C19orf81C9J6K1 198 aa18.41■□□□□ 0.54
TGFB1-202ENST00000597453 USP17L10C9JJH3 530 aa18.41■□□□□ 0.54
TGFB1-202ENST00000597453 HMMRO75330 724 aa18.41■□□□□ 0.54
TGFB1-202ENST00000597453 GH2P01242 217 aa18.41■□□□□ 0.54
TGFB1-202ENST00000597453 PDE6AP16499 860 aa18.41■□□□□ 0.54
TGFB1-202ENST00000597453 HOXA7P31268 230 aaPredicted RBP18.41■□□□□ 0.54
TGFB1-202ENST00000597453 IRX3P78415 501 aaPredicted RBP18.41■□□□□ 0.54
TGFB1-202ENST00000597453 TMED8Q6PL24 325 aaPredicted RBP18.41■□□□□ 0.54
TGFB1-202ENST00000597453 UBE2Q1Q7Z7E8 422 aa18.41■□□□□ 0.54
TGFB1-202ENST00000597453 U2AF1L4Q8WU68 220 aaKnown RBP18.41■□□□□ 0.54
TGFB1-202ENST00000597453 P2RX7Q99572 595 aaKnown RBP18.41■□□□□ 0.54
TGFB1-202ENST00000597453 EHD4Q9H223 541 aa18.41■□□□□ 0.54
TGFB1-202ENST00000597453 MORF4L1Q9UBU8 362 aa18.41■□□□□ 0.54
TGFB1-202ENST00000597453 SERPINB13Q9UIV8 391 aa18.41■□□□□ 0.54
TGFB1-202ENST00000597453 GOLIM4O00461 696 aa18.4■□□□□ 0.54
TGFB1-202ENST00000597453 TTF1Q15361 905 aaPredicted RBP18.4■□□□□ 0.54
TGFB1-202ENST00000597453 HABP4Q5JVS0 413 aaKnown RBP18.4■□□□□ 0.54
TGFB1-202ENST00000597453 SLC9C2Q5TAH2 1124 aa18.4■□□□□ 0.54
TGFB1-202ENST00000597453 C20orf194Q5TEA3 1177 aa18.4■□□□□ 0.54
TGFB1-202ENST00000597453 PPIL4Q8WUA2 492 aaKnown RBP eCLIP18.4■□□□□ 0.54
TGFB1-202ENST00000597453 EDC3Q96F86 508 aaKnown RBP18.4■□□□□ 0.54
TGFB1-202ENST00000597453 DNAJC2Q99543 621 aaKnown RBP18.4■□□□□ 0.54
TGFB1-202ENST00000597453 CHMP4BQ9H444 224 aaKnown RBP18.4■□□□□ 0.54
TGFB1-202ENST00000597453 TXNRD2Q9NNW7 524 aa18.4■□□□□ 0.54
TGFB1-202ENST00000597453 EMILIN3Q9NT22 766 aa18.4■□□□□ 0.54
TGFB1-202ENST00000597453 MAGEB6P1A0A0J9YX57 407 aa18.39■□□□□ 0.53
TGFB1-202ENST00000597453 IFIT2P09913 472 aaKnown RBP18.39■□□□□ 0.53
TGFB1-202ENST00000597453 PLCD1P51178 756 aa18.39■□□□□ 0.53
TGFB1-202ENST00000597453 HERVK_113P62684 666 aa18.39■□□□□ 0.53
TGFB1-202ENST00000597453 EVX2Q03828 476 aa18.39■□□□□ 0.53
TGFB1-202ENST00000597453 GJD2Q9UKL4 321 aa18.39■□□□□ 0.53
TGFB1-202ENST00000597453 ZNF532Q9HCE3 1301 aa18.39■□□□□ 0.53
TGFB1-202ENST00000597453 MYH7P12883 1935 aa18.39■□□□□ 0.53
TGFB1-202ENST00000597453 TRIOBPQ9H2D6 2365 aa18.38■□□□□ 0.53
TGFB1-202ENST00000597453 TCRBV5S4A2TA0A5A2 114 aa18.38■□□□□ 0.53
TGFB1-202ENST00000597453 H0YGN5 161 aa18.38■□□□□ 0.53
TGFB1-202ENST00000597453 RAB11FIP3O75154 756 aa18.38■□□□□ 0.53
TGFB1-202ENST00000597453 SGPL1O95470 568 aa18.38■□□□□ 0.53
TGFB1-202ENST00000597453 RRP1P56182 461 aaKnown RBP18.38■□□□□ 0.53
TGFB1-202ENST00000597453 POTEEQ6S8J3 1075 aa18.38■□□□□ 0.53
TGFB1-202ENST00000597453 TTC6Q86TZ1 520 aa18.38■□□□□ 0.53
TGFB1-202ENST00000597453 MYH8P13535 1937 aa18.37■□□□□ 0.53
TGFB1-202ENST00000597453 BAZ2AQ9UIF9 1905 aaKnown RBP18.37■□□□□ 0.53
TGFB1-202ENST00000597453 SHMT1P34896 483 aa18.37■□□□□ 0.53
TGFB1-202ENST00000597453 ZYXQ15942 572 aaKnown RBP18.37■□□□□ 0.53
TGFB1-202ENST00000597453 USP17L2Q6R6M4 530 aa18.37■□□□□ 0.53
TGFB1-202ENST00000597453 LCORLQ8N3X6 602 aa18.37■□□□□ 0.53
TGFB1-202ENST00000597453 DEFB118Q96PH6 123 aa18.37■□□□□ 0.53
TGFB1-202ENST00000597453 PAK6Q9NQU5 681 aaPredicted RBP18.37■□□□□ 0.53
TGFB1-202ENST00000597453 RBPJLQ9UBG7 517 aa18.37■□□□□ 0.53
TGFB1-202ENST00000597453 FARP2O94887 1054 aaPredicted RBP18.36■□□□□ 0.53
TGFB1-202ENST00000597453 TRIM32Q13049 653 aa18.36■□□□□ 0.53
TGFB1-202ENST00000597453 RAB3GAP1Q15042 981 aa18.36■□□□□ 0.53
TGFB1-202ENST00000597453 ABCB5Q2M3G0 1257 aa18.36■□□□□ 0.53
TGFB1-202ENST00000597453 SLFNL1Q499Z3 407 aa18.36■□□□□ 0.53
TGFB1-202ENST00000597453 CERKLQ49MI3 558 aaPredicted RBP18.36■□□□□ 0.53
TGFB1-202ENST00000597453 GPRC5AQ8NFJ5 357 aa18.36■□□□□ 0.53
TGFB1-202ENST00000597453 ACER1Q8TDN7 264 aa18.36■□□□□ 0.53
TGFB1-202ENST00000597453 SDR42E1Q8WUS8 393 aa18.36■□□□□ 0.53
TGFB1-202ENST00000597453 C12orf42Q96LP6 360 aa18.36■□□□□ 0.53
TGFB1-202ENST00000597453 FEZ1Q99689 392 aa18.36■□□□□ 0.53
TGFB1-202ENST00000597453 CRNKL1Q9BZJ0 848 aaKnown RBP18.36■□□□□ 0.53
TGFB1-202ENST00000597453 BOLA2Q9H3K6 86 aa18.36■□□□□ 0.53
TGFB1-202ENST00000597453 COLQQ9Y215 455 aaPredicted RBP18.36■□□□□ 0.53
TGFB1-202ENST00000597453 ALPK3Q96L96 1907 aa18.35■□□□□ 0.53
TGFB1-202ENST00000597453 POLR3DP05423 398 aaPredicted RBP18.35■□□□□ 0.53
TGFB1-202ENST00000597453 GABPAQ06546 454 aa18.35■□□□□ 0.53
TGFB1-202ENST00000597453 Q3C1V9 767 aa18.35■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 156 ms