RNA–Protein interactions for RNA: ENST00000594297.1

FOXA3-202, Transcript of forkhead box A3, humanhuman

TSL 3

Gene FOXA3, Length 538 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA3-202ENST00000594297 COL6A1P12109 1028 aa18.82■□□□□ 0.6
FOXA3-202ENST00000594297 IL15P40933 162 aaPredicted RBP18.82■□□□□ 0.6
FOXA3-202ENST00000594297 ATP8B2P98198 1209 aa18.82■□□□□ 0.6
FOXA3-202ENST00000594297 MECOMQ03112 1051 aa18.82■□□□□ 0.6
FOXA3-202ENST00000594297 SH3D19Q5HYK7 790 aa18.82■□□□□ 0.6
FOXA3-202ENST00000594297 TBC1D2Q9BYX2 928 aa18.82■□□□□ 0.6
FOXA3-202ENST00000594297 LTBP2Q14767 1821 aa18.81■□□□□ 0.6
FOXA3-202ENST00000594297 CAP2P40123 477 aa18.81■□□□□ 0.6
FOXA3-202ENST00000594297 MDM2Q00987 491 aaPredicted RBP18.81■□□□□ 0.6
FOXA3-202ENST00000594297 LRRC26Q2I0M4 334 aa18.81■□□□□ 0.6
FOXA3-202ENST00000594297 SPTY2D1Q68D10 685 aaPredicted RBP18.81■□□□□ 0.6
FOXA3-202ENST00000594297 PHF6Q8IWS0 365 aaKnown RBP eCLIP18.81■□□□□ 0.6
FOXA3-202ENST00000594297 SOCS4Q8WXH5 440 aa18.81■□□□□ 0.6
FOXA3-202ENST00000594297 GUCD1Q96NT3 240 aa18.81■□□□□ 0.6
FOXA3-202ENST00000594297 TXNRD2Q9NNW7 524 aa18.81■□□□□ 0.6
FOXA3-202ENST00000594297 CDK5RAP2Q96SN8 1893 aa18.81■□□□□ 0.6
FOXA3-202ENST00000594297 EYSQ5T1H1 3165 aa18.81■□□□□ 0.6
FOXA3-202ENST00000594297 USP17L5A8MUK1 530 aa18.8■□□□□ 0.6
FOXA3-202ENST00000594297 NPM3O75607 178 aaKnown RBP18.8■□□□□ 0.6
FOXA3-202ENST00000594297 IRX3P78415 501 aaPredicted RBP18.8■□□□□ 0.6
FOXA3-202ENST00000594297 HDAC1Q13547 482 aaPredicted RBP18.8■□□□□ 0.6
FOXA3-202ENST00000594297 MTMR2Q13614 643 aa18.8■□□□□ 0.6
FOXA3-202ENST00000594297 CEP85Q6P2H3 762 aa18.8■□□□□ 0.6
FOXA3-202ENST00000594297 ERICH6Q7L0X2 663 aa18.8■□□□□ 0.6
FOXA3-202ENST00000594297 PCDHB15Q9Y5E8 787 aa18.8■□□□□ 0.6
FOXA3-202ENST00000594297 FOCADQ5VW36 1801 aa18.79■□□□□ 0.6
FOXA3-202ENST00000594297 LAMA2P24043 3122 aaKnown RBP18.79■□□□□ 0.6
FOXA3-202ENST00000594297 SRGAP3O43295 1099 aa18.79■□□□□ 0.6
FOXA3-202ENST00000594297 ZKSCAN1P17029 563 aaPredicted RBP18.79■□□□□ 0.6
FOXA3-202ENST00000594297 CCND3P30281 292 aaPredicted RBP18.79■□□□□ 0.6
FOXA3-202ENST00000594297 CACNB2Q08289 660 aaPredicted RBP18.79■□□□□ 0.6
FOXA3-202ENST00000594297 NUDT12Q9BQG2 462 aa18.79■□□□□ 0.6
FOXA3-202ENST00000594297 AS3MTQ9HBK9 375 aa18.79■□□□□ 0.6
FOXA3-202ENST00000594297 ZBTB47Q9UFB7 747 aaPredicted RBP18.79■□□□□ 0.6
FOXA3-202ENST00000594297 XRCC5P13010 732 aaKnown RBP18.78■□□□□ 0.6
FOXA3-202ENST00000594297 TIMM10P62072 90 aa18.78■□□□□ 0.6
FOXA3-202ENST00000594297 MTX1Q13505 466 aa18.78■□□□□ 0.6
FOXA3-202ENST00000594297 CCL14Q16627 93 aa18.78■□□□□ 0.6
FOXA3-202ENST00000594297 PI16Q6UXB8 463 aa18.78■□□□□ 0.6
FOXA3-202ENST00000594297 A0A1B0GUL7 405 aa18.77■□□□□ 0.6
FOXA3-202ENST00000594297 HERVK_113P62684 666 aa18.77■□□□□ 0.6
FOXA3-202ENST00000594297 HSP90AB4PQ58FF6 505 aa18.77■□□□□ 0.6
FOXA3-202ENST00000594297 LHX8Q68G74 356 aa18.77■□□□□ 0.6
FOXA3-202ENST00000594297 CENPQQ7L2Z9 268 aaPredicted RBP18.77■□□□□ 0.6
FOXA3-202ENST00000594297 NSUN4Q96CB9 384 aaKnown RBP18.77■□□□□ 0.6
FOXA3-202ENST00000594297 XAGE2Q96GT9 111 aa18.77■□□□□ 0.6
FOXA3-202ENST00000594297 FAM161BQ96MY7 647 aa18.77■□□□□ 0.6
FOXA3-202ENST00000594297 P2RX7Q99572 595 aaKnown RBP18.77■□□□□ 0.6
FOXA3-202ENST00000594297 PORCNQ9H237 461 aa18.77■□□□□ 0.6
FOXA3-202ENST00000594297 COPRSQ9NQ92 184 aa18.77■□□□□ 0.6
FOXA3-202ENST00000594297 DNAH12Q6ZR08 3092 aa18.76■□□□□ 0.59
FOXA3-202ENST00000594297 HOXA7P31268 230 aaPredicted RBP18.76■□□□□ 0.59
FOXA3-202ENST00000594297 BACE1P56817 501 aa18.76■□□□□ 0.59
FOXA3-202ENST00000594297 SHROOM1Q2M3G4 852 aaPredicted RBP18.76■□□□□ 0.59
FOXA3-202ENST00000594297 B4GALNT3Q6L9W6 998 aa18.76■□□□□ 0.59
FOXA3-202ENST00000594297 GPRC5AQ8NFJ5 357 aa18.76■□□□□ 0.59
FOXA3-202ENST00000594297 USP6NLQ92738 828 aa18.76■□□□□ 0.59
FOXA3-202ENST00000594297 WDR18Q9BV38 432 aa18.76■□□□□ 0.59
FOXA3-202ENST00000594297 HERC5Q9UII4 1024 aaKnown RBP18.76■□□□□ 0.59
FOXA3-202ENST00000594297 VCANP13611 3396 aa18.76■□□□□ 0.59
FOXA3-202ENST00000594297 POTEB2H3BUK9 544 aa18.75■□□□□ 0.59
FOXA3-202ENST00000594297 MAPK4P31152 587 aa18.75■□□□□ 0.59
FOXA3-202ENST00000594297 JAG1P78504 1218 aa18.75■□□□□ 0.59
FOXA3-202ENST00000594297 FAM109BQ6ICB4 259 aaPredicted RBP18.75■□□□□ 0.59
FOXA3-202ENST00000594297 GPR142Q7Z601 462 aa18.75■□□□□ 0.59
FOXA3-202ENST00000594297 TEX11Q8IYF3 940 aa18.75■□□□□ 0.59
FOXA3-202ENST00000594297 TRMT44Q8IYL2 757 aaKnown RBP18.75■□□□□ 0.59
FOXA3-202ENST00000594297 SSH3Q8TE77 659 aa18.75■□□□□ 0.59
FOXA3-202ENST00000594297 APBA2Q99767 749 aa18.75■□□□□ 0.59
FOXA3-202ENST00000594297 TMOD4Q9NZQ9 345 aa18.75■□□□□ 0.59
FOXA3-202ENST00000594297 HMG20BQ9P0W2 317 aa18.75■□□□□ 0.59
FOXA3-202ENST00000594297 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP18.75■□□□□ 0.59
FOXA3-202ENST00000594297 SPTBN5Q9NRC6 3674 aaKnown RBP18.74■□□□□ 0.59
FOXA3-202ENST00000594297 MAP4K4O95819 1239 aaPredicted RBP18.74■□□□□ 0.59
FOXA3-202ENST00000594297 RGS2P41220 211 aa18.74■□□□□ 0.59
FOXA3-202ENST00000594297 ERVK-9P63128 1117 aa18.74■□□□□ 0.59
FOXA3-202ENST00000594297 ERVK-24P63145 666 aa18.74■□□□□ 0.59
FOXA3-202ENST00000594297 GSTO1P78417 241 aa18.74■□□□□ 0.59
FOXA3-202ENST00000594297 TFCP2Q12800 502 aa18.74■□□□□ 0.59
FOXA3-202ENST00000594297 MORN1Q5T089 497 aa18.74■□□□□ 0.59
FOXA3-202ENST00000594297 TBC1D9Q6ZT07 1266 aa18.74■□□□□ 0.59
FOXA3-202ENST00000594297 PAGR1Q9BTK6 254 aa18.74■□□□□ 0.59
FOXA3-202ENST00000594297 DNAJC18Q9H819 358 aa18.74■□□□□ 0.59
FOXA3-202ENST00000594297 RBPJLQ9UBG7 517 aa18.74■□□□□ 0.59
FOXA3-202ENST00000594297 LDHCP07864 332 aa18.73■□□□□ 0.59
FOXA3-202ENST00000594297 ASNSP08243 561 aa18.73■□□□□ 0.59
FOXA3-202ENST00000594297 OS9Q13438 667 aaPredicted RBP18.73■□□□□ 0.59
FOXA3-202ENST00000594297 Q3C1V9 767 aa18.73■□□□□ 0.59
FOXA3-202ENST00000594297 POTEEQ6S8J3 1075 aa18.73■□□□□ 0.59
FOXA3-202ENST00000594297 SH3RF3Q8TEJ3 882 aaPredicted RBP18.73■□□□□ 0.59
FOXA3-202ENST00000594297 RAI14Q9P0K7 980 aa18.73■□□□□ 0.59
FOXA3-202ENST00000594297 PNMA6EA0A0J9YXQ4 647 aa18.72■□□□□ 0.59
FOXA3-202ENST00000594297 SURF6O75683 361 aaKnown RBP18.72■□□□□ 0.59
FOXA3-202ENST00000594297 GDF11O95390 407 aa18.72■□□□□ 0.59
FOXA3-202ENST00000594297 G3BP1Q13283 466 aaKnown RBP eCLIP18.72■□□□□ 0.59
FOXA3-202ENST00000594297 POLA2Q14181 598 aa18.72■□□□□ 0.59
FOXA3-202ENST00000594297 PLEKHH3Q7Z736 793 aa18.72■□□□□ 0.59
FOXA3-202ENST00000594297 ERC1Q8IUD2 1116 aa18.72■□□□□ 0.59
FOXA3-202ENST00000594297 SPATA5Q8NB90 893 aa18.72■□□□□ 0.59
FOXA3-202ENST00000594297 RAB11FIP3O75154 756 aa18.71■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 84.7 ms