RNA–Protein interactions for RNA: ENST00000594235.1

SIN3B-203, Transcript of SIN3 transcription regulator family member B, humanhuman

TSL 1 (best)

Gene SIN3B, Length 923 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3B-203ENST00000594235 DOCK3Q8IZD9 2030 aa23.3■■□□□ 1.32
SIN3B-203ENST00000594235 RANBP2P49792 3224 aaKnown RBP23.29■■□□□ 1.32
SIN3B-203ENST00000594235 H0YGN5 161 aa23.29■■□□□ 1.32
SIN3B-203ENST00000594235 GDF11O95390 407 aa23.29■■□□□ 1.32
SIN3B-203ENST00000594235 AACSQ86V21 672 aa23.29■■□□□ 1.32
SIN3B-203ENST00000594235 MAGEB6Q8N7X4 407 aa23.29■■□□□ 1.32
SIN3B-203ENST00000594235 TRIM34Q9BYJ4 488 aa23.29■■□□□ 1.32
SIN3B-203ENST00000594235 GINM1Q9NU53 330 aa23.29■■□□□ 1.32
SIN3B-203ENST00000594235 ZBTB21Q9ULJ3 1066 aa23.29■■□□□ 1.32
SIN3B-203ENST00000594235 HLA-DOAP06340 250 aa23.28■■□□□ 1.32
SIN3B-203ENST00000594235 HOXA7P31268 230 aaPredicted RBP23.27■■□□□ 1.32
SIN3B-203ENST00000594235 CERS3Q8IU89 383 aa23.27■■□□□ 1.32
SIN3B-203ENST00000594235 TMOD4Q9NZQ9 345 aa23.27■■□□□ 1.32
SIN3B-203ENST00000594235 MORF4L1Q9UBU8 362 aa23.27■■□□□ 1.32
SIN3B-203ENST00000594235 TAOK2Q9UL54 1235 aa23.27■■□□□ 1.32
SIN3B-203ENST00000594235 COLQQ9Y215 455 aaPredicted RBP23.27■■□□□ 1.32
SIN3B-203ENST00000594235 TRIOBPQ9H2D6 2365 aa23.26■■□□□ 1.31
SIN3B-203ENST00000594235 C19orf81C9J6K1 198 aa23.26■■□□□ 1.31
SIN3B-203ENST00000594235 SGPL1O95470 568 aa23.26■■□□□ 1.31
SIN3B-203ENST00000594235 MAP3K12Q12852 859 aa23.26■■□□□ 1.31
SIN3B-203ENST00000594235 IL1RAPL2Q9NP60 686 aa23.26■■□□□ 1.31
SIN3B-203ENST00000594235 PAK6Q9NQU5 681 aaPredicted RBP23.26■■□□□ 1.31
SIN3B-203ENST00000594235 USP17L10C9JJH3 530 aa23.25■■□□□ 1.31
SIN3B-203ENST00000594235 IRX3P78415 501 aaPredicted RBP23.25■■□□□ 1.31
SIN3B-203ENST00000594235 TMED8Q6PL24 325 aaPredicted RBP23.25■■□□□ 1.31
SIN3B-203ENST00000594235 RHPN1Q8TCX5 695 aa23.25■■□□□ 1.31
SIN3B-203ENST00000594235 GJD2Q9UKL4 321 aa23.25■■□□□ 1.31
SIN3B-203ENST00000594235 FARP2O94887 1054 aaPredicted RBP23.24■■□□□ 1.31
SIN3B-203ENST00000594235 USP5P45974 858 aa23.24■■□□□ 1.31
SIN3B-203ENST00000594235 HSP90AB4PQ58FF6 505 aa23.24■■□□□ 1.31
SIN3B-203ENST00000594235 DPF3Q92784 378 aa23.24■■□□□ 1.31
SIN3B-203ENST00000594235 P2RX7Q99572 595 aaKnown RBP23.24■■□□□ 1.31
SIN3B-203ENST00000594235 PEX10O60683 326 aa23.23■■□□□ 1.31
SIN3B-203ENST00000594235 GH2P01242 217 aa23.23■■□□□ 1.31
SIN3B-203ENST00000594235 FXR1P51114 621 aaKnown RBP eCLIP23.23■■□□□ 1.31
SIN3B-203ENST00000594235 HERVK_113P62684 666 aa23.23■■□□□ 1.31
SIN3B-203ENST00000594235 TATDN1Q6P1N9 297 aa23.23■■□□□ 1.31
SIN3B-203ENST00000594235 DEFB118Q96PH6 123 aa23.23■■□□□ 1.31
SIN3B-203ENST00000594235 RIOK1Q9BRS2 568 aaKnown RBP23.23■■□□□ 1.31
SIN3B-203ENST00000594235 EHD4Q9H223 541 aa23.23■■□□□ 1.31
SIN3B-203ENST00000594235 TXNRD2Q9NNW7 524 aa23.23■■□□□ 1.31
SIN3B-203ENST00000594235 EMILIN3Q9NT22 766 aa23.23■■□□□ 1.31
SIN3B-203ENST00000594235 MS4A1P11836 297 aa23.22■■□□□ 1.31
SIN3B-203ENST00000594235 SIRT2Q8IXJ6 389 aa23.22■■□□□ 1.31
SIN3B-203ENST00000594235 HTATIP2Q9BUP3 242 aa23.22■■□□□ 1.31
SIN3B-203ENST00000594235 SERPINB13Q9UIV8 391 aa23.22■■□□□ 1.31
SIN3B-203ENST00000594235 MYH1P12882 1939 aa23.21■■□□□ 1.31
SIN3B-203ENST00000594235 HMGCRP04035 888 aa23.21■■□□□ 1.31
SIN3B-203ENST00000594235 CRISPLD2Q9H0B8 497 aa23.21■■□□□ 1.31
SIN3B-203ENST00000594235 ZBTB40Q9NUA8 1239 aa23.21■■□□□ 1.31
SIN3B-203ENST00000594235 TFRCP02786 760 aaKnown RBP23.2■■□□□ 1.3
SIN3B-203ENST00000594235 USP17L2Q6R6M4 530 aa23.2■■□□□ 1.3
SIN3B-203ENST00000594235 POTEEQ6S8J3 1075 aa23.2■■□□□ 1.3
SIN3B-203ENST00000594235 RPAP2Q8IXW5 612 aaPredicted RBP23.2■■□□□ 1.3
SIN3B-203ENST00000594235 CLASRPQ8N2M8 674 aaKnown RBP23.2■■□□□ 1.3
SIN3B-203ENST00000594235 GPRC5AQ8NFJ5 357 aa23.2■■□□□ 1.3
SIN3B-203ENST00000594235 KIF1BPQ96EK5 621 aa23.2■■□□□ 1.3
SIN3B-203ENST00000594235 XRN2Q9H0D6 950 aaKnown RBP eCLIP23.2■■□□□ 1.3
SIN3B-203ENST00000594235 RBPJLQ9UBG7 517 aa23.2■■□□□ 1.3
SIN3B-203ENST00000594235 COG6Q9Y2V7 657 aa23.2■■□□□ 1.3
SIN3B-203ENST00000594235 APBB1O00213 710 aa23.19■■□□□ 1.3
SIN3B-203ENST00000594235 PDE6AP16499 860 aa23.19■■□□□ 1.3
SIN3B-203ENST00000594235 CAPN2P17655 700 aa23.19■■□□□ 1.3
SIN3B-203ENST00000594235 TTF1Q15361 905 aaPredicted RBP23.19■■□□□ 1.3
SIN3B-203ENST00000594235 TTC6Q86TZ1 520 aa23.19■■□□□ 1.3
SIN3B-203ENST00000594235 C12orf42Q96LP6 360 aa23.19■■□□□ 1.3
SIN3B-203ENST00000594235 DDX19BQ9UMR2 479 aa23.19■■□□□ 1.3
SIN3B-203ENST00000594235 DDX60LQ5H9U9 1706 aaKnown RBP23.19■■□□□ 1.3
SIN3B-203ENST00000594235 SZT2Q5T011 3432 aa23.18■■□□□ 1.3
SIN3B-203ENST00000594235 PLXNB2O15031 1838 aa23.18■■□□□ 1.3
SIN3B-203ENST00000594235 MAGEB6P1A0A0J9YX57 407 aa23.18■■□□□ 1.3
SIN3B-203ENST00000594235 PLCD1P51178 756 aa23.18■■□□□ 1.3
SIN3B-203ENST00000594235 TRIM32Q13049 653 aa23.18■■□□□ 1.3
SIN3B-203ENST00000594235 SLC9C2Q5TAH2 1124 aa23.18■■□□□ 1.3
SIN3B-203ENST00000594235 CHRDL2Q6WN34 429 aa23.18■■□□□ 1.3
SIN3B-203ENST00000594235 PPIL4Q8WUA2 492 aaKnown RBP eCLIP23.18■■□□□ 1.3
SIN3B-203ENST00000594235 TRIB2Q92519 343 aa23.18■■□□□ 1.3
SIN3B-203ENST00000594235 HMMRO75330 724 aa23.17■■□□□ 1.3
SIN3B-203ENST00000594235 SHMT1P34896 483 aa23.17■■□□□ 1.3
SIN3B-203ENST00000594235 ERVK-9P63128 1117 aa23.17■■□□□ 1.3
SIN3B-203ENST00000594235 ERVK-24P63145 666 aa23.17■■□□□ 1.3
SIN3B-203ENST00000594235 Q3C1V9 767 aa23.17■■□□□ 1.3
SIN3B-203ENST00000594235 CERKLQ49MI3 558 aaPredicted RBP23.17■■□□□ 1.3
SIN3B-203ENST00000594235 GTF3C2Q8WUA4 911 aaPredicted RBP23.17■■□□□ 1.3
SIN3B-203ENST00000594235 FEZ1Q99689 392 aa23.17■■□□□ 1.3
SIN3B-203ENST00000594235 TCRBV5S4A2TA0A5A2 114 aa23.16■■□□□ 1.3
SIN3B-203ENST00000594235 GOLIM4O00461 696 aa23.16■■□□□ 1.3
SIN3B-203ENST00000594235 IFIT2P09913 472 aaKnown RBP23.16■■□□□ 1.3
SIN3B-203ENST00000594235 GABPAQ06546 454 aa23.16■■□□□ 1.3
SIN3B-203ENST00000594235 RAB3GAP1Q15042 981 aa23.16■■□□□ 1.3
SIN3B-203ENST00000594235 ZYXQ15942 572 aaKnown RBP23.16■■□□□ 1.3
SIN3B-203ENST00000594235 ABCB5Q2M3G0 1257 aa23.16■■□□□ 1.3
SIN3B-203ENST00000594235 SOCS4Q8WXH5 440 aa23.16■■□□□ 1.3
SIN3B-203ENST00000594235 KIAA1683Q9H0B3 1180 aa23.16■■□□□ 1.3
SIN3B-203ENST00000594235 PORCNQ9H237 461 aa23.16■■□□□ 1.3
SIN3B-203ENST00000594235 RPTORQ8N122 1335 aa23.15■■□□□ 1.3
SIN3B-203ENST00000594235 ZNF532Q9HCE3 1301 aa23.15■■□□□ 1.3
SIN3B-203ENST00000594235 CYP2B6P20813 491 aa23.15■■□□□ 1.3
SIN3B-203ENST00000594235 MAPK4P31152 587 aa23.15■■□□□ 1.3
SIN3B-203ENST00000594235 EVX2Q03828 476 aa23.15■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms