RNA–Protein interactions for RNA: ENST00000592208.5

RAVER1-204, Transcript of ribonucleoprotein, PTB binding 1, humanhuman

TSL 1 (best)

Gene RAVER1, Length 4,693 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAVER1-204ENST00000592208 ZBED4O75132 1171 aa16.4■□□□□ 0.22
RAVER1-204ENST00000592208 MAP3K9P80192 1104 aa16.4■□□□□ 0.22
RAVER1-204ENST00000592208 CLUL1Q15846 466 aa16.4■□□□□ 0.22
RAVER1-204ENST00000592208 TTC38Q5R3I4 469 aa16.4■□□□□ 0.22
RAVER1-204ENST00000592208 XRCC6P12956 609 aaKnown RBP eCLIP16.39■□□□□ 0.21
RAVER1-204ENST00000592208 ADCY7P51828 1080 aa16.39■□□□□ 0.21
RAVER1-204ENST00000592208 CDAN1Q8IWY9 1227 aa16.39■□□□□ 0.21
RAVER1-204ENST00000592208 IFNKQ9P0W0 207 aa16.39■□□□□ 0.21
RAVER1-204ENST00000592208 PDE6AP16499 860 aa16.39■□□□□ 0.21
RAVER1-204ENST00000592208 GRIPAP1Q4V328 841 aa16.39■□□□□ 0.21
RAVER1-204ENST00000592208 ARHGAP27Q6ZUM4 889 aa16.39■□□□□ 0.21
RAVER1-204ENST00000592208 CPXCR1Q8N123 301 aa16.39■□□□□ 0.21
RAVER1-204ENST00000592208 ATP6V0A2Q9Y487 856 aa16.39■□□□□ 0.21
RAVER1-204ENST00000592208 TBC1D8BQ0IIM8 1120 aa16.39■□□□□ 0.21
RAVER1-204ENST00000592208 CCDC14Q49A88 953 aa16.39■□□□□ 0.21
RAVER1-204ENST00000592208 PKD2L1Q9P0L9 805 aa16.39■□□□□ 0.21
RAVER1-204ENST00000592208 ZNF804BA4D1E1 1349 aa16.39■□□□□ 0.21
RAVER1-204ENST00000592208 AFF2P51816 1311 aa16.39■□□□□ 0.21
RAVER1-204ENST00000592208 SCNN1DP51172 638 aa16.39■□□□□ 0.21
RAVER1-204ENST00000592208 AKNAD1Q5T1N1 836 aa16.39■□□□□ 0.21
RAVER1-204ENST00000592208 TMC4Q7Z404 712 aa16.39■□□□□ 0.21
RAVER1-204ENST00000592208 ZNF274Q96GC6 653 aaPredicted RBP16.39■□□□□ 0.21
RAVER1-204ENST00000592208 IWS1Q96ST2 819 aa16.39■□□□□ 0.21
RAVER1-204ENST00000592208 NUCKS1Q9H1E3 243 aaKnown RBP16.39■□□□□ 0.21
RAVER1-204ENST00000592208 ZNF174Q15697 407 aa16.38■□□□□ 0.21
RAVER1-204ENST00000592208 CHURC1Q8WUH1 139 aa16.38■□□□□ 0.21
RAVER1-204ENST00000592208 GPR108Q9NPR9 543 aa16.38■□□□□ 0.21
RAVER1-204ENST00000592208 STX10O60499 249 aa16.38■□□□□ 0.21
RAVER1-204ENST00000592208 NT5C2P49902 561 aa16.38■□□□□ 0.21
RAVER1-204ENST00000592208 EAPPQ56P03 285 aaPredicted RBP16.38■□□□□ 0.21
RAVER1-204ENST00000592208 RNF187Q5TA31 235 aaPredicted RBP16.38■□□□□ 0.21
RAVER1-204ENST00000592208 CLSTN2Q9H4D0 955 aa16.38■□□□□ 0.21
RAVER1-204ENST00000592208 KDM2BQ8NHM5 1336 aa16.38■□□□□ 0.21
RAVER1-204ENST00000592208 CDK12Q9NYV4 1490 aaPredicted RBP16.38■□□□□ 0.21
RAVER1-204ENST00000592208 PALLDQ8WX93 1383 aa16.38■□□□□ 0.21
RAVER1-204ENST00000592208 IVLP07476 585 aa16.38■□□□□ 0.21
RAVER1-204ENST00000592208 PHKA1P46020 1223 aa16.38■□□□□ 0.21
RAVER1-204ENST00000592208 PDE4DQ08499 809 aa16.38■□□□□ 0.21
RAVER1-204ENST00000592208 GALNT17Q6IS24 598 aa16.38■□□□□ 0.21
RAVER1-204ENST00000592208 CCDC84Q86UT8 332 aaPredicted RBP16.38■□□□□ 0.21
RAVER1-204ENST00000592208 PLIN2Q99541 437 aa16.38■□□□□ 0.21
RAVER1-204ENST00000592208 NT5C3AQ9H0P0 336 aa16.38■□□□□ 0.21
RAVER1-204ENST00000592208 IMPACTQ9P2X3 320 aa16.38■□□□□ 0.21
RAVER1-204ENST00000592208 IVNS1ABPQ9Y6Y0 642 aa16.38■□□□□ 0.21
RAVER1-204ENST00000592208 CDC42BPBQ9Y5S2 1711 aa16.38■□□□□ 0.21
RAVER1-204ENST00000592208 ARHGEF35A5YM69 484 aa16.37■□□□□ 0.21
RAVER1-204ENST00000592208 ERICH4A6NGS2 130 aa16.37■□□□□ 0.21
RAVER1-204ENST00000592208 PTGS1P23219 599 aa16.37■□□□□ 0.21
RAVER1-204ENST00000592208 NOX5Q96PH1 765 aa16.37■□□□□ 0.21
RAVER1-204ENST00000592208 NOC4LQ9BVI4 516 aaKnown RBP16.37■□□□□ 0.21
RAVER1-204ENST00000592208 SEC31BQ9NQW1 1179 aa16.37■□□□□ 0.21
RAVER1-204ENST00000592208 EEF2P13639 858 aaKnown RBP16.37■□□□□ 0.21
RAVER1-204ENST00000592208 FAM47AQ5JRC9 791 aa16.37■□□□□ 0.21
RAVER1-204ENST00000592208 CROCCP2Q86T23 111 aa16.37■□□□□ 0.21
RAVER1-204ENST00000592208 NLRP10Q86W26 655 aa16.37■□□□□ 0.21
RAVER1-204ENST00000592208 LRWD1Q9UFC0 647 aa16.37■□□□□ 0.21
RAVER1-204ENST00000592208 RNF123Q5XPI4 1314 aa16.37■□□□□ 0.21
RAVER1-204ENST00000592208 RNF17Q9BXT8 1623 aaKnown RBP16.37■□□□□ 0.21
RAVER1-204ENST00000592208 ZNF853P0CG23 659 aa16.37■□□□□ 0.21
RAVER1-204ENST00000592208 CALCOCO2Q13137 446 aa16.37■□□□□ 0.21
RAVER1-204ENST00000592208 DPY19L2Q6NUT2 758 aa16.37■□□□□ 0.21
RAVER1-204ENST00000592208 BAG1Q99933 345 aaPredicted RBP16.37■□□□□ 0.21
RAVER1-204ENST00000592208 ATP8A2Q9NTI2 1148 aa16.37■□□□□ 0.21
RAVER1-204ENST00000592208 SRP68Q9UHB9 627 aaKnown RBP16.37■□□□□ 0.21
RAVER1-204ENST00000592208 DIP2CQ9Y2E4 1556 aa16.37■□□□□ 0.21
RAVER1-204ENST00000592208 SEMA3EO15041 775 aa16.36■□□□□ 0.21
RAVER1-204ENST00000592208 STX17P56962 302 aa16.36■□□□□ 0.21
RAVER1-204ENST00000592208 CCDC26Q8TAB7 109 aa16.36■□□□□ 0.21
RAVER1-204ENST00000592208 SEC62Q99442 399 aaKnown RBP16.36■□□□□ 0.21
RAVER1-204ENST00000592208 ERFEQ4G0M1 354 aa16.36■□□□□ 0.21
RAVER1-204ENST00000592208 DNM3Q9UQ16 869 aa16.36■□□□□ 0.21
RAVER1-204ENST00000592208 PLCB3Q01970 1234 aa16.36■□□□□ 0.21
RAVER1-204ENST00000592208 TICAM2Q86XR7 235 aa16.36■□□□□ 0.21
RAVER1-204ENST00000592208 SDR42E1Q8WUS8 393 aa16.36■□□□□ 0.21
RAVER1-204ENST00000592208 XDHP47989 1333 aa16.36■□□□□ 0.21
RAVER1-204ENST00000592208 A0A0D9SFI3 127 aa16.36■□□□□ 0.21
RAVER1-204ENST00000592208 A0A1B0GVL5 298 aa16.36■□□□□ 0.21
RAVER1-204ENST00000592208 NDC80O14777 642 aa16.36■□□□□ 0.21
RAVER1-204ENST00000592208 PPARAQ07869 468 aa16.36■□□□□ 0.21
RAVER1-204ENST00000592208 STRN3Q13033 797 aa16.36■□□□□ 0.21
RAVER1-204ENST00000592208 OTUD7BQ6GQQ9 843 aa16.36■□□□□ 0.21
RAVER1-204ENST00000592208 ZSWIM4Q9H7M6 989 aa16.36■□□□□ 0.21
RAVER1-204ENST00000592208 CLTCL1P53675 1640 aa16.36■□□□□ 0.21
RAVER1-204ENST00000592208 NSMFQ6X4W1 530 aa16.35■□□□□ 0.21
RAVER1-204ENST00000592208 PIK3AP1Q6ZUJ8 805 aa16.35■□□□□ 0.21
RAVER1-204ENST00000592208 GSTA5Q7RTV2 222 aa16.35■□□□□ 0.21
RAVER1-204ENST00000592208 CCDC117Q8IWD4 279 aaPredicted RBP16.35■□□□□ 0.21
RAVER1-204ENST00000592208 TMX1Q9H3N1 280 aa16.35■□□□□ 0.21
RAVER1-204ENST00000592208 BIN2Q9UBW5 565 aaPredicted RBP16.35■□□□□ 0.21
RAVER1-204ENST00000592208 ARHGEF40Q8TER5 1519 aa16.35■□□□□ 0.21
RAVER1-204ENST00000592208 E7EWF7 191 aa16.35■□□□□ 0.21
RAVER1-204ENST00000592208 HAUS7Q99871 368 aa16.35■□□□□ 0.21
RAVER1-204ENST00000592208 ERVV-1B6SEH8 477 aa16.35■□□□□ 0.21
RAVER1-204ENST00000592208 ADORA1P30542 326 aa16.35■□□□□ 0.21
RAVER1-204ENST00000592208 KRT40Q6A162 431 aa16.35■□□□□ 0.21
RAVER1-204ENST00000592208 TRAF3IP1Q8TDR0 691 aaPredicted RBP16.35■□□□□ 0.21
RAVER1-204ENST00000592208 PHKBQ93100 1093 aa16.35■□□□□ 0.21
RAVER1-204ENST00000592208 A6NNZ2 444 aa16.34■□□□□ 0.21
RAVER1-204ENST00000592208 CBX1P83916 185 aa16.34■□□□□ 0.21
RAVER1-204ENST00000592208 TUBB8Q3ZCM7 444 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms