RNA–Protein interactions for RNA: ENST00000591462.5

PRKCSH-212, Transcript of protein kinase C substrate 80K-H, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PRKCSH, Length 2,209 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-212ENST00000591462 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.39■□□□□ 0.213e-7■■■□□ 14.7
PRKCSH-212ENST00000591462 FBXO2Q9UK22 296 aaPredicted RBP16.39■□□□□ 0.21
PRKCSH-212ENST00000591462 SARSP49591 514 aaKnown RBP16.38■□□□□ 0.21
PRKCSH-212ENST00000591462 IFIT5Q13325 482 aaKnown RBP16.38■□□□□ 0.21
PRKCSH-212ENST00000591462 MTF1Q14872 753 aa16.38■□□□□ 0.21
PRKCSH-212ENST00000591462 TAF7LQ5H9L4 462 aa16.38■□□□□ 0.21
PRKCSH-212ENST00000591462 NT5DC1Q5TFE4 455 aa16.38■□□□□ 0.21
PRKCSH-212ENST00000591462 CPLX2Q6PUV4 134 aaKnown RBP16.38■□□□□ 0.21
PRKCSH-212ENST00000591462 NOSTRINQ8IVI9 506 aa16.38■□□□□ 0.21
PRKCSH-212ENST00000591462 TMEM87BQ96K49 555 aa16.38■□□□□ 0.21
PRKCSH-212ENST00000591462 ZCCHC17Q9NP64 241 aaKnown RBP16.38■□□□□ 0.21
PRKCSH-212ENST00000591462 SERTAD1Q9UHV2 236 aa16.38■□□□□ 0.21
PRKCSH-212ENST00000591462 WWC3Q9ULE0 1092 aa16.38■□□□□ 0.21
PRKCSH-212ENST00000591462 ZNF532Q9HCE3 1301 aa16.38■□□□□ 0.21
PRKCSH-212ENST00000591462 RGPD3A6NKT7 1758 aaPredicted RBP16.38■□□□□ 0.21
PRKCSH-212ENST00000591462 RGPD4Q7Z3J3 1758 aa16.38■□□□□ 0.21
PRKCSH-212ENST00000591462 TRIM29Q14134 588 aa16.38■□□□□ 0.21
PRKCSH-212ENST00000591462 METTL24Q5JXM2 366 aa16.38■□□□□ 0.21
PRKCSH-212ENST00000591462 TEX35Q5T0J7 233 aa16.38■□□□□ 0.21
PRKCSH-212ENST00000591462 NFXL1Q6ZNB6 911 aa16.38■□□□□ 0.21
PRKCSH-212ENST00000591462 DNAJC10Q8IXB1 793 aa16.38■□□□□ 0.21
PRKCSH-212ENST00000591462 ELOA2Q8IYF1 753 aaPredicted RBP16.38■□□□□ 0.21
PRKCSH-212ENST00000591462 DHX58Q96C10 678 aa16.38■□□□□ 0.21
PRKCSH-212ENST00000591462 PDGFDQ9GZP0 370 aaPredicted RBP16.38■□□□□ 0.21
PRKCSH-212ENST00000591462 MRPL44Q9H9J2 332 aaKnown RBP16.38■□□□□ 0.21
PRKCSH-212ENST00000591462 SAMSN1Q9NSI8 373 aaKnown RBP16.38■□□□□ 0.21
PRKCSH-212ENST00000591462 POLR2DO15514 142 aaKnown RBP16.37■□□□□ 0.21
PRKCSH-212ENST00000591462 IDH1O75874 414 aaKnown RBP16.37■□□□□ 0.21
PRKCSH-212ENST00000591462 TPM1P09493 284 aa16.37■□□□□ 0.21
PRKCSH-212ENST00000591462 HNRNPH2P55795 449 aaKnown RBP16.37■□□□□ 0.21
PRKCSH-212ENST00000591462 ST5P78524 1137 aa16.37■□□□□ 0.21
PRKCSH-212ENST00000591462 MORC3Q14149 939 aa16.37■□□□□ 0.21
PRKCSH-212ENST00000591462 TMEM67Q5HYA8 995 aa16.37■□□□□ 0.21
PRKCSH-212ENST00000591462 GPR161Q8N6U8 529 aaKnown RBP16.37■□□□□ 0.21
PRKCSH-212ENST00000591462 PLA2G12BQ9BX93 195 aa16.37■□□□□ 0.21
PRKCSH-212ENST00000591462 TEX13AQ9BXU3 409 aaPredicted RBP16.37■□□□□ 0.21
PRKCSH-212ENST00000591462 IRX2Q9BZI1 471 aaPredicted RBP16.37■□□□□ 0.21
PRKCSH-212ENST00000591462 TMEM51Q9NW97 253 aa16.37■□□□□ 0.21
PRKCSH-212ENST00000591462 KCNJ14Q9UNX9 436 aa16.37■□□□□ 0.21
PRKCSH-212ENST00000591462 ZNF330Q9Y3S2 320 aaPredicted RBP16.37■□□□□ 0.21
PRKCSH-212ENST00000591462 TCRBV5S4A2TA0A5A2 114 aa16.37■□□□□ 0.21
PRKCSH-212ENST00000591462 ATP8B1O43520 1251 aa16.37■□□□□ 0.21
PRKCSH-212ENST00000591462 FMNL1O95466 1100 aaPredicted RBP16.37■□□□□ 0.21
PRKCSH-212ENST00000591462 PCCAP05165 728 aaPredicted RBP16.37■□□□□ 0.21
PRKCSH-212ENST00000591462 PTPREP23469 700 aa16.37■□□□□ 0.21
PRKCSH-212ENST00000591462 IRX5P78411 483 aaPredicted RBP16.37■□□□□ 0.21
PRKCSH-212ENST00000591462 KARSQ15046 597 aaKnown RBP16.37■□□□□ 0.21
PRKCSH-212ENST00000591462 ENOX1Q8TC92 643 aaKnown RBP16.37■□□□□ 0.21
PRKCSH-212ENST00000591462 PARD6BQ9BYG5 372 aa16.37■□□□□ 0.21
PRKCSH-212ENST00000591462 EPB41L4AQ9HCS5 686 aaPredicted RBP16.37■□□□□ 0.21
PRKCSH-212ENST00000591462 CALCOCO1Q9P1Z2 691 aa16.37■□□□□ 0.21
PRKCSH-212ENST00000591462 MAP3K15Q6ZN16 1313 aa16.36■□□□□ 0.21
PRKCSH-212ENST00000591462 STK36Q9NRP7 1315 aa16.36■□□□□ 0.21
PRKCSH-212ENST00000591462 A0A0U1RQJ8 604 aa16.36■□□□□ 0.21
PRKCSH-212ENST00000591462 GOLGA6L9A6NEM1 432 aa16.36■□□□□ 0.21
PRKCSH-212ENST00000591462 MMP1P03956 469 aa16.36■□□□□ 0.21
PRKCSH-212ENST00000591462 PDE6AP16499 860 aa16.36■□□□□ 0.21
PRKCSH-212ENST00000591462 OAS2P29728 719 aaKnown RBP16.36■□□□□ 0.21
PRKCSH-212ENST00000591462 R3HDM1Q15032 1099 aaKnown RBP16.36■□□□□ 0.21
PRKCSH-212ENST00000591462 UBE3CQ15386 1083 aa16.36■□□□□ 0.21
PRKCSH-212ENST00000591462 SLC27A3Q5K4L6 730 aa16.36■□□□□ 0.21
PRKCSH-212ENST00000591462 USP49Q70CQ1 688 aa16.36■□□□□ 0.21
PRKCSH-212ENST00000591462 VGLL2Q8N8G2 317 aa16.36■□□□□ 0.21
PRKCSH-212ENST00000591462 NEK11Q8NG66 645 aa16.36■□□□□ 0.21
PRKCSH-212ENST00000591462 ATRIPQ8WXE1 791 aa16.36■□□□□ 0.21
PRKCSH-212ENST00000591462 ZSWIM5Q9P217 1185 aa16.36■□□□□ 0.21
PRKCSH-212ENST00000591462 CDK11BP21127 795 aaKnown RBP16.35■□□□□ 0.21
PRKCSH-212ENST00000591462 CTDSPL2Q05D32 466 aa16.35■□□□□ 0.21
PRKCSH-212ENST00000591462 SSRP1Q08945 709 aaKnown RBP16.35■□□□□ 0.21
PRKCSH-212ENST00000591462 TRIM28Q13263 835 aaKnown RBP16.35■□□□□ 0.21
PRKCSH-212ENST00000591462 NR1I3Q14994 352 aa16.35■□□□□ 0.21
PRKCSH-212ENST00000591462 DIS3L2Q8IYB7 885 aaKnown RBP16.35■□□□□ 0.21
PRKCSH-212ENST00000591462 MLKLQ8NB16 471 aa16.35■□□□□ 0.21
PRKCSH-212ENST00000591462 SMARCE1Q969G3 411 aa16.35■□□□□ 0.21
PRKCSH-212ENST00000591462 CCDC34Q96HJ3 373 aa16.35■□□□□ 0.21
PRKCSH-212ENST00000591462 STRBPQ96SI9 672 aaKnown RBP16.35■□□□□ 0.21
PRKCSH-212ENST00000591462 GREM2Q9H772 168 aa16.35■□□□□ 0.21
PRKCSH-212ENST00000591462 RAI14Q9P0K7 980 aa16.35■□□□□ 0.21
PRKCSH-212ENST00000591462 ACTN4O43707 911 aaKnown RBP16.35■□□□□ 0.21
PRKCSH-212ENST00000591462 LDHAL6AQ6ZMR3 332 aa16.35■□□□□ 0.21
PRKCSH-212ENST00000591462 APTXQ7Z2E3 356 aaKnown RBP16.35■□□□□ 0.21
PRKCSH-212ENST00000591462 ZBTB38Q8NAP3 1195 aaPredicted RBP16.35■□□□□ 0.21
PRKCSH-212ENST00000591462 ZNF512BQ96KM6 892 aaPredicted RBP16.35■□□□□ 0.21
PRKCSH-212ENST00000591462 FUT8Q9BYC5 575 aa16.35■□□□□ 0.21
PRKCSH-212ENST00000591462 PCDHB6Q9Y5E3 794 aa16.35■□□□□ 0.21
PRKCSH-212ENST00000591462 SOWAHDA6NJG2 315 aa16.34■□□□□ 0.21
PRKCSH-212ENST00000591462 TEX33O43247 280 aa16.34■□□□□ 0.21
PRKCSH-212ENST00000591462 IFNAR1P17181 557 aa16.34■□□□□ 0.21
PRKCSH-212ENST00000591462 ITGA6P23229 1130 aa16.34■□□□□ 0.21
PRKCSH-212ENST00000591462 LIFRP42702 1097 aa16.34■□□□□ 0.21
PRKCSH-212ENST00000591462 PHKA1P46020 1223 aa16.34■□□□□ 0.21
PRKCSH-212ENST00000591462 NR5A1Q13285 461 aa16.34■□□□□ 0.21
PRKCSH-212ENST00000591462 SMC1AQ14683 1233 aaKnown RBP16.34■□□□□ 0.21
PRKCSH-212ENST00000591462 TTLL11Q8NHH1 800 aa16.34■□□□□ 0.21
PRKCSH-212ENST00000591462 SLC12A7Q9Y666 1083 aa16.34■□□□□ 0.21
PRKCSH-212ENST00000591462 TAF1LQ8IZX4 1826 aa16.34■□□□□ 0.21
PRKCSH-212ENST00000591462 TULP2O00295 520 aa16.34■□□□□ 0.21
PRKCSH-212ENST00000591462 IFIT3O14879 490 aaKnown RBP16.34■□□□□ 0.21
PRKCSH-212ENST00000591462 CMTR1Q8N1G2 835 aaKnown RBP16.34■□□□□ 0.21
PRKCSH-212ENST00000591462 RABGGTAQ92696 567 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms