RNA–Protein interactions for RNA: ENST00000588745.5

SMAD4-205, Transcript of SMAD family member 4, humanhuman

TSL 5 BASIC

Gene SMAD4, Length 1,371 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-205ENST00000588745 ZBTB12Q9Y330 459 aaPredicted RBP13.34□□□□□ -0.27
SMAD4-205ENST00000588745 PLIN4Q96Q06 1357 aa13.34□□□□□ -0.27
SMAD4-205ENST00000588745 VPS37CA5D8V6 355 aaPredicted RBP13.33□□□□□ -0.27
SMAD4-205ENST00000588745 SPDYE2BA6NHP3 402 aa13.33□□□□□ -0.27
SMAD4-205ENST00000588745 CDKL5O76039 1030 aa13.33□□□□□ -0.27
SMAD4-205ENST00000588745 F13A1P00488 732 aa13.33□□□□□ -0.27
SMAD4-205ENST00000588745 SPDYE6P0CI01 402 aa13.33□□□□□ -0.27
SMAD4-205ENST00000588745 TSPY3P0CV98 308 aa13.33□□□□□ -0.27
SMAD4-205ENST00000588745 TSPY8P0CW00 308 aa13.33□□□□□ -0.27
SMAD4-205ENST00000588745 CDC27P30260 824 aa13.33□□□□□ -0.27
SMAD4-205ENST00000588745 PRELPP51888 382 aa13.33□□□□□ -0.27
SMAD4-205ENST00000588745 CACNB3P54284 484 aa13.33□□□□□ -0.27
SMAD4-205ENST00000588745 GABPAQ06546 454 aa13.33□□□□□ -0.27
SMAD4-205ENST00000588745 TNIP1Q15025 636 aa13.33□□□□□ -0.27
SMAD4-205ENST00000588745 CCDC178Q5BJE1 867 aa13.33□□□□□ -0.27
SMAD4-205ENST00000588745 CPLX2Q6PUV4 134 aaKnown RBP13.33□□□□□ -0.27
SMAD4-205ENST00000588745 ZNF444Q8N0Y2 327 aaPredicted RBP13.33□□□□□ -0.27
SMAD4-205ENST00000588745 EHD4Q9H223 541 aa13.33□□□□□ -0.27
SMAD4-205ENST00000588745 TDRD3Q9H7E2 651 aaKnown RBP13.33□□□□□ -0.27
SMAD4-205ENST00000588745 TCP11L1Q9NUJ3 509 aa13.33□□□□□ -0.27
SMAD4-205ENST00000588745 FAM198AQ9UFP1 575 aa13.33□□□□□ -0.27
SMAD4-205ENST00000588745 SWAP70Q9UH65 585 aa13.33□□□□□ -0.27
SMAD4-205ENST00000588745 ATRNL1Q5VV63 1379 aa13.33□□□□□ -0.28
SMAD4-205ENST00000588745 DICER1Q9UPY3 1922 aaKnown RBP13.33□□□□□ -0.28
SMAD4-205ENST00000588745 NMT2O60551 498 aa13.32□□□□□ -0.28
SMAD4-205ENST00000588745 ENTPD3O75355 529 aa13.32□□□□□ -0.28
SMAD4-205ENST00000588745 DDAH1O94760 285 aa13.32□□□□□ -0.28
SMAD4-205ENST00000588745 DLGAP5Q15398 846 aa13.32□□□□□ -0.28
SMAD4-205ENST00000588745 RTN1Q16799 776 aa13.32□□□□□ -0.28
SMAD4-205ENST00000588745 CCDC144CPQ8IYA2 1237 aa13.32□□□□□ -0.28
SMAD4-205ENST00000588745 MTMR14Q8NCE2 650 aa13.32□□□□□ -0.28
SMAD4-205ENST00000588745 PRMT6Q96LA8 375 aaPredicted RBP13.32□□□□□ -0.28
SMAD4-205ENST00000588745 DHX36Q9H2U1 1008 aaKnown RBP13.32□□□□□ -0.28
SMAD4-205ENST00000588745 FAM217BQ9NTX9 383 aaPredicted RBP13.32□□□□□ -0.28
SMAD4-205ENST00000588745 TMOD2Q9NZR1 351 aa13.32□□□□□ -0.28
SMAD4-205ENST00000588745 SERPINB13Q9UIV8 391 aa13.32□□□□□ -0.28
SMAD4-205ENST00000588745 GREB1LQ9C091 1923 aaPredicted RBP13.32□□□□□ -0.28
SMAD4-205ENST00000588745 FZD9O00144 591 aa13.32□□□□□ -0.28
SMAD4-205ENST00000588745 CALM1P0DP23 149 aa13.32□□□□□ -0.28
SMAD4-205ENST00000588745 CALM2P0DP24 149 aa13.32□□□□□ -0.28
SMAD4-205ENST00000588745 CALM3P0DP25 149 aa13.32□□□□□ -0.28
SMAD4-205ENST00000588745 FDPSP14324 419 aaKnown RBP13.32□□□□□ -0.28
SMAD4-205ENST00000588745 RPS12P25398 132 aaKnown RBP13.32□□□□□ -0.28
SMAD4-205ENST00000588745 ADD1P35611 737 aaKnown RBP13.32□□□□□ -0.28
SMAD4-205ENST00000588745 MMP14P50281 582 aa13.32□□□□□ -0.28
SMAD4-205ENST00000588745 EIF6P56537 245 aaKnown RBP13.32□□□□□ -0.28
SMAD4-205ENST00000588745 PPP2R5BQ15173 497 aa13.32□□□□□ -0.28
SMAD4-205ENST00000588745 NTRK3Q16288 839 aa13.32□□□□□ -0.28
SMAD4-205ENST00000588745 RCSD1Q6JBY9 416 aa13.32□□□□□ -0.28
SMAD4-205ENST00000588745 CDC37L1Q7L3B6 337 aa13.32□□□□□ -0.28
SMAD4-205ENST00000588745 CATIPQ7Z7H3 387 aa13.32□□□□□ -0.28
SMAD4-205ENST00000588745 DGKHQ86XP1 1220 aa13.32□□□□□ -0.28
SMAD4-205ENST00000588745 ZFPM1Q8IX07 1006 aa13.32□□□□□ -0.28
SMAD4-205ENST00000588745 NEDD1Q8NHV4 660 aa13.32□□□□□ -0.28
SMAD4-205ENST00000588745 NUP133Q8WUM0 1156 aa13.32□□□□□ -0.28
SMAD4-205ENST00000588745 IL17RBQ9NRM6 502 aa13.32□□□□□ -0.28
SMAD4-205ENST00000588745 TAOK2Q9UL54 1235 aa13.32□□□□□ -0.28
SMAD4-205ENST00000588745 GOLGB1Q14789 3259 aaKnown RBP13.31□□□□□ -0.28
SMAD4-205ENST00000588745 STK36Q9NRP7 1315 aa13.31□□□□□ -0.28
SMAD4-205ENST00000588745 CCDC196A0A1B0GTZ2 297 aa13.31□□□□□ -0.28
SMAD4-205ENST00000588745 GOLGA6L22H0YM25 854 aa13.31□□□□□ -0.28
SMAD4-205ENST00000588745 PTMSP20962 102 aa13.31□□□□□ -0.28
SMAD4-205ENST00000588745 TCP10Q12799 353 aa13.31□□□□□ -0.28
SMAD4-205ENST00000588745 TROAPQ12815 778 aa13.31□□□□□ -0.28
SMAD4-205ENST00000588745 SPDYE2Q495Y8 402 aa13.31□□□□□ -0.28
SMAD4-205ENST00000588745 ANKS1AQ92625 1134 aa13.31□□□□□ -0.28
SMAD4-205ENST00000588745 ZBED3Q96IU2 234 aaPredicted RBP13.31□□□□□ -0.28
SMAD4-205ENST00000588745 ORC3Q9UBD5 711 aaPredicted RBP13.31□□□□□ -0.28
SMAD4-205ENST00000588745 ATP6V1DQ9Y5K8 247 aa13.31□□□□□ -0.28
SMAD4-205ENST00000588745 DDTLA6NHG4 134 aaPredicted RBP13.3□□□□□ -0.28
SMAD4-205ENST00000588745 H3BQV1 296 aa13.3□□□□□ -0.28
SMAD4-205ENST00000588745 PPFIA3O75145 1194 aa13.3□□□□□ -0.28
SMAD4-205ENST00000588745 IFNAR1P17181 557 aa13.3□□□□□ -0.28
SMAD4-205ENST00000588745 SHMT1P34896 483 aa13.3□□□□□ -0.28
SMAD4-205ENST00000588745 IFFO2Q5TF58 517 aa13.3□□□□□ -0.28
SMAD4-205ENST00000588745 SH3BP5LQ7L8J4 393 aa13.3□□□□□ -0.28
SMAD4-205ENST00000588745 FANCBQ8NB91 859 aa13.3□□□□□ -0.28
SMAD4-205ENST00000588745 SYT17Q9BSW7 474 aa13.3□□□□□ -0.28
SMAD4-205ENST00000588745 KAT14Q9H8E8 782 aa13.3□□□□□ -0.28
SMAD4-205ENST00000588745 RBM28Q9NW13 759 aaKnown RBP13.3□□□□□ -0.28
SMAD4-205ENST00000588745 ZNF70Q9UC06 446 aaPredicted RBP13.3□□□□□ -0.28
SMAD4-205ENST00000588745 ZNF541Q9H0D2 1346 aa13.3□□□□□ -0.28
SMAD4-205ENST00000588745 SBF1O95248 1867 aa13.29□□□□□ -0.28
SMAD4-205ENST00000588745 CLRN2A0PK11 232 aa13.29□□□□□ -0.28
SMAD4-205ENST00000588745 FMNL1O95466 1100 aaPredicted RBP13.29□□□□□ -0.28
SMAD4-205ENST00000588745 LMNB1P20700 586 aa13.29□□□□□ -0.28
SMAD4-205ENST00000588745 ZNF280AP59817 542 aaPredicted RBP13.29□□□□□ -0.28
SMAD4-205ENST00000588745 FKBP1CQ5VVH2 108 aa13.29□□□□□ -0.28
SMAD4-205ENST00000588745 MCTP1Q6DN14 999 aa13.29□□□□□ -0.28
SMAD4-205ENST00000588745 ARHGAP27Q6ZUM4 889 aa13.29□□□□□ -0.28
SMAD4-205ENST00000588745 ZSCAN29Q8IWY8 852 aaPredicted RBP13.29□□□□□ -0.28
SMAD4-205ENST00000588745 RGS22Q8NE09 1264 aa13.29□□□□□ -0.28
SMAD4-205ENST00000588745 PHKBQ93100 1093 aa13.29□□□□□ -0.28
SMAD4-205ENST00000588745 DNAJC18Q9H819 358 aa13.29□□□□□ -0.28
SMAD4-205ENST00000588745 MYOZ2Q9NPC6 264 aa13.29□□□□□ -0.28
SMAD4-205ENST00000588745 PI4KBQ9UBF8 816 aa13.29□□□□□ -0.28
SMAD4-205ENST00000588745 MYH15Q9Y2K3 1946 aa13.28□□□□□ -0.28
SMAD4-205ENST00000588745 IGKV6D-41A0A0C4DH26 115 aa13.28□□□□□ -0.28
SMAD4-205ENST00000588745 MYO1BO43795 1136 aa13.28□□□□□ -0.28
SMAD4-205ENST00000588745 AKR1B1P15121 316 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms