RNA–Protein interactions for RNA: ENST00000584155.1

NUP85-225, Transcript of nucleoporin 85, human

TSL 2

Gene NUP85, Length 300 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NUP85-225	ENST00000584155	PSMD14	O00487	310 aa		4.61	□□□□□ -1.67
NUP85-225	ENST00000584155	TRPA1	O75762	1119 aa		4.61	□□□□□ -1.67
NUP85-225	ENST00000584155	EIF3J	O75822	258 aa	Known RBP	4.61	□□□□□ -1.67
NUP85-225	ENST00000584155	PTMA	P06454	111 aa	Known RBP	4.61	□□□□□ -1.67
NUP85-225	ENST00000584155	RHOQ	P17081	205 aa		4.61	□□□□□ -1.67
NUP85-225	ENST00000584155	SSTR3	P32745	418 aa	Predicted RBP	4.61	□□□□□ -1.67
NUP85-225	ENST00000584155	MAP2K2	P36507	400 aa		4.61	□□□□□ -1.67
NUP85-225	ENST00000584155	MAP2K3	P46734	347 aa		4.61	□□□□□ -1.67
NUP85-225	ENST00000584155	RNF144A	P50876	292 aa	Predicted RBP	4.61	□□□□□ -1.67
NUP85-225	ENST00000584155	GPSM2	P81274	684 aa		4.61	□□□□□ -1.67
NUP85-225	ENST00000584155	SKIV2L	Q15477	1246 aa	Known RBP	4.61	□□□□□ -1.67
NUP85-225	ENST00000584155	NAALADL2	Q58DX5	795 aa		4.61	□□□□□ -1.67
NUP85-225	ENST00000584155	SH3D19	Q5HYK7	790 aa		4.61	□□□□□ -1.67
NUP85-225	ENST00000584155	INTS6L	Q5JSJ4	861 aa	Known RBP	4.61	□□□□□ -1.67
NUP85-225	ENST00000584155	NKAPL	Q5M9Q1	402 aa		4.61	□□□□□ -1.67
NUP85-225	ENST00000584155	SP8	Q8IXZ3	490 aa		4.61	□□□□□ -1.67
NUP85-225	ENST00000584155	SMC5	Q8IY18	1101 aa		4.61	□□□□□ -1.67
NUP85-225	ENST00000584155	NIM1K	Q8IY84	436 aa		4.61	□□□□□ -1.67
NUP85-225	ENST00000584155	XAGE3	Q8WTP9	111 aa		4.61	□□□□□ -1.67
NUP85-225	ENST00000584155	RTF1	Q92541	710 aa	Known RBP	4.61	□□□□□ -1.67
NUP85-225	ENST00000584155	RPGR	Q92834	1020 aa	Known RBP	4.61	□□□□□ -1.67
NUP85-225	ENST00000584155	CELF1	Q92879	486 aa	Known RBP	4.61	□□□□□ -1.67
NUP85-225	ENST00000584155	NLRP3	Q96P20	1036 aa		4.61	□□□□□ -1.67
NUP85-225	ENST00000584155	TRERF1	Q96PN7	1200 aa		4.61	□□□□□ -1.67
NUP85-225	ENST00000584155	MXD3	Q9BW11	206 aa		4.61	□□□□□ -1.67
NUP85-225	ENST00000584155	KRTAP4-9	Q9BYQ8	210 aa		4.61	□□□□□ -1.67
NUP85-225	ENST00000584155	VRTN	Q9H8Y1	702 aa		4.61	□□□□□ -1.67
NUP85-225	ENST00000584155	DBNDD1	Q9H9R9	158 aa		4.61	□□□□□ -1.67
NUP85-225	ENST00000584155	ADARB2	Q9NS39	739 aa	Known RBP	4.61	□□□□□ -1.67
NUP85-225	ENST00000584155	RNF186	Q9NXI6	227 aa		4.61	□□□□□ -1.67
NUP85-225	ENST00000584155	NSFL1C	Q9UNZ2	370 aa	Known RBP	4.61	□□□□□ -1.67
NUP85-225	ENST00000584155	ZNF652	Q9Y2D9	606 aa		4.61	□□□□□ -1.67
NUP85-225	ENST00000584155	SIPA1L3	O60292	1781 aa	Predicted RBP	4.6	□□□□□ -1.67
NUP85-225	ENST00000584155	SCN4A	P35499	1836 aa		4.6	□□□□□ -1.67
NUP85-225	ENST00000584155	POLR2A	P24928	1970 aa	Known RBP	4.6	□□□□□ -1.67
NUP85-225	ENST00000584155	ARID1B	Q8NFD5	2236 aa	Predicted RBP	4.6	□□□□□ -1.67
NUP85-225	ENST00000584155	ATP5J2-PTCD1	G3V325	749 aa		4.6	□□□□□ -1.67
NUP85-225	ENST00000584155	GNB5	O14775	395 aa		4.6	□□□□□ -1.67
NUP85-225	ENST00000584155	LILRA1	O75019	489 aa		4.6	□□□□□ -1.67
NUP85-225	ENST00000584155	TBC1D8	O95759	1140 aa		4.6	□□□□□ -1.67
NUP85-225	ENST00000584155	VAMP1	P23763	118 aa		4.6	□□□□□ -1.67
NUP85-225	ENST00000584155	LMOD1	P29536	600 aa	Predicted RBP	4.6	□□□□□ -1.67
NUP85-225	ENST00000584155	ADD1	P35611	737 aa	Known RBP	4.6	□□□□□ -1.67
NUP85-225	ENST00000584155	ECE1	P42892	770 aa		4.6	□□□□□ -1.67
NUP85-225	ENST00000584155	PTGIR	P43119	386 aa		4.6	□□□□□ -1.67
NUP85-225	ENST00000584155	HUNK	P57058	714 aa		4.6	□□□□□ -1.67
NUP85-225	ENST00000584155	CAP1	Q01518	475 aa		4.6	□□□□□ -1.67
NUP85-225	ENST00000584155	KIAA2012	Q0VF49	1180 aa		4.6	□□□□□ -1.67
NUP85-225	ENST00000584155	B4GALNT3	Q6L9W6	998 aa		4.6	□□□□□ -1.67
NUP85-225	ENST00000584155	CDC37L1	Q7L3B6	337 aa		4.6	□□□□□ -1.67
NUP85-225	ENST00000584155	PRICKLE2	Q7Z3G6	844 aa		4.6	□□□□□ -1.67
NUP85-225	ENST00000584155	APBB1IP	Q7Z5R6	666 aa	Predicted RBP	4.6	□□□□□ -1.67
NUP85-225	ENST00000584155	NLRP10	Q86W26	655 aa		4.6	□□□□□ -1.67
NUP85-225	ENST00000584155	FAM89A	Q96GI7	184 aa		4.6	□□□□□ -1.67
NUP85-225	ENST00000584155	UTP14A	Q9BVJ6	771 aa	Known RBP	4.6	□□□□□ -1.67
NUP85-225	ENST00000584155	SEC31B	Q9NQW1	1179 aa		4.6	□□□□□ -1.67
NUP85-225	ENST00000584155	FZD1	Q9UP38	647 aa		4.6	□□□□□ -1.67
NUP85-225	ENST00000584155	TMA7	Q9Y2S6	64 aa	Known RBP	4.6	□□□□□ -1.67
NUP85-225	ENST00000584155	DYRK1B	Q9Y463	629 aa		4.6	□□□□□ -1.67
NUP85-225	ENST00000584155	CLSPN	Q9HAW4	1339 aa		4.6	□□□□□ -1.67
NUP85-225	ENST00000584155	UBE2Q2L	H0YL09	131 aa		4.59	□□□□□ -1.67
NUP85-225	ENST00000584155		H7C1W4	665 aa		4.59	□□□□□ -1.67
NUP85-225	ENST00000584155	HTATSF1	O43719	755 aa	Known RBP	4.59	□□□□□ -1.67
NUP85-225	ENST00000584155	BBOX1	O75936	387 aa		4.59	□□□□□ -1.67
NUP85-225	ENST00000584155	THBS1	P07996	1170 aa		4.59	□□□□□ -1.67
NUP85-225	ENST00000584155	DGKG	P49619	791 aa		4.59	□□□□□ -1.67
NUP85-225	ENST00000584155	SCN7A	Q01118	1682 aa		4.59	□□□□□ -1.67
NUP85-225	ENST00000584155	TCIRG1	Q13488	830 aa		4.59	□□□□□ -1.67
NUP85-225	ENST00000584155	RGMB	Q6NW40	437 aa		4.59	□□□□□ -1.67
NUP85-225	ENST00000584155	DPP8	Q6V1X1	898 aa	Predicted RBP	4.59	□□□□□ -1.67
NUP85-225	ENST00000584155	RIPOR1	Q6ZS17	1223 aa		4.59	□□□□□ -1.67
NUP85-225	ENST00000584155	ZNF662	Q6ZS27	426 aa		4.59	□□□□□ -1.67
NUP85-225	ENST00000584155	PPP1R42	Q7Z4L9	355 aa		4.59	□□□□□ -1.67
NUP85-225	ENST00000584155	RTL9	Q8NET4	1388 aa		4.59	□□□□□ -1.67
NUP85-225	ENST00000584155	EDARADD	Q8WWZ3	215 aa		4.59	□□□□□ -1.67
NUP85-225	ENST00000584155	GPKOW	Q92917	476 aa	Predicted RBP eCLIP	4.59	□□□□□ -1.67
NUP85-225	ENST00000584155	SGSM3	Q96HU1	749 aa		4.59	□□□□□ -1.67
NUP85-225	ENST00000584155	CCDC85A	Q96PX6	553 aa	Predicted RBP	4.59	□□□□□ -1.67
NUP85-225	ENST00000584155	BEGAIN	Q9BUH8	593 aa		4.59	□□□□□ -1.67
NUP85-225	ENST00000584155	BCL2L13	Q9BXK5	485 aa		4.59	□□□□□ -1.67
NUP85-225	ENST00000584155	NYX	Q9GZU5	481 aa		4.59	□□□□□ -1.67
NUP85-225	ENST00000584155	CDV3	Q9UKY7	258 aa	Known RBP	4.59	□□□□□ -1.67
NUP85-225	ENST00000584155	VIL1	P09327	827 aa	Known RBP	4.58	□□□□□ -1.68
NUP85-225	ENST00000584155	ZNF157	P51786	506 aa	Predicted RBP	4.58	□□□□□ -1.68
NUP85-225	ENST00000584155	RIPK4	P57078	832 aa		4.58	□□□□□ -1.68
NUP85-225	ENST00000584155	IGBP1	P78318	339 aa		4.58	□□□□□ -1.68
NUP85-225	ENST00000584155	GRAP	Q13588	217 aa		4.58	□□□□□ -1.68
NUP85-225	ENST00000584155	NFE2L2	Q16236	605 aa		4.58	□□□□□ -1.68
NUP85-225	ENST00000584155	WASHC4	Q2M389	1173 aa		4.58	□□□□□ -1.68
NUP85-225	ENST00000584155	LONRF3	Q496Y0	759 aa		4.58	□□□□□ -1.68
NUP85-225	ENST00000584155	DNAJC14	Q6Y2X3	702 aa	Predicted RBP	4.58	□□□□□ -1.68
NUP85-225	ENST00000584155	KIF6	Q6ZMV9	814 aa		4.58	□□□□□ -1.68
NUP85-225	ENST00000584155	DPH6	Q7L8W6	267 aa		4.58	□□□□□ -1.68
NUP85-225	ENST00000584155	KRT26	Q7Z3Y9	468 aa		4.58	□□□□□ -1.68
NUP85-225	ENST00000584155	TXNRD3	Q86VQ6	643 aa		4.58	□□□□□ -1.68
NUP85-225	ENST00000584155	CCDC146	Q8IYE0	955 aa		4.58	□□□□□ -1.68
NUP85-225	ENST00000584155	NME8	Q8N427	588 aa		4.58	□□□□□ -1.68
NUP85-225	ENST00000584155	GRAPL	Q8TC17	118 aa	Predicted RBP	4.58	□□□□□ -1.68
NUP85-225	ENST00000584155	KRTAP4-2	Q9BYR5	136 aa		4.58	□□□□□ -1.68
NUP85-225	ENST00000584155	PHAX	Q9H814	394 aa	Known RBP	4.58	□□□□□ -1.68

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