RNA–Protein interactions for RNA: ENST00000584074.5

PPP4R1-228, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 3

Gene PPP4R1, Length 625 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-228ENST00000584074 TSHZ3Q63HK5 1081 aa25.94■■□□□ 1.74
PPP4R1-228ENST00000584074 TATDN1Q6P1N9 297 aa25.94■■□□□ 1.74
PPP4R1-228ENST00000584074 SMCR8Q8TEV9 937 aaPredicted RBP25.94■■□□□ 1.74
PPP4R1-228ENST00000584074 SDR42E1Q8WUS8 393 aa25.94■■□□□ 1.74
PPP4R1-228ENST00000584074 ARMC5Q96C12 935 aa25.94■■□□□ 1.74
PPP4R1-228ENST00000584074 MBD4O95243 580 aa25.93■■□□□ 1.74
PPP4R1-228ENST00000584074 FMNL1O95466 1100 aaPredicted RBP25.93■■□□□ 1.74
PPP4R1-228ENST00000584074 GNRH1P01148 92 aa25.93■■□□□ 1.74
PPP4R1-228ENST00000584074 POLR3DP05423 398 aaPredicted RBP25.93■■□□□ 1.74
PPP4R1-228ENST00000584074 EVX2Q03828 476 aa25.93■■□□□ 1.74
PPP4R1-228ENST00000584074 SH3D19Q5HYK7 790 aa25.93■■□□□ 1.74
PPP4R1-228ENST00000584074 GINM1Q9NU53 330 aa25.93■■□□□ 1.74
PPP4R1-228ENST00000584074 GH2P01242 217 aa25.92■■□□□ 1.74
PPP4R1-228ENST00000584074 BACE1P56817 501 aa25.92■■□□□ 1.74
PPP4R1-228ENST00000584074 DCP1AQ9NPI6 582 aaPredicted RBP25.92■■□□□ 1.74
PPP4R1-228ENST00000584074 MCM9Q9NXL9 1143 aa25.92■■□□□ 1.74
PPP4R1-228ENST00000584074 MYH1P12882 1939 aa25.92■■□□□ 1.74
PPP4R1-228ENST00000584074 PRKAB2O43741 272 aa25.91■■□□□ 1.74
PPP4R1-228ENST00000584074 SLC9C1Q4G0N8 1177 aa25.91■■□□□ 1.74
PPP4R1-228ENST00000584074 GPATCH3Q96I76 525 aa25.91■■□□□ 1.74
PPP4R1-228ENST00000584074 OSBPP22059 807 aa25.9■■□□□ 1.74
PPP4R1-228ENST00000584074 SHMT1P34896 483 aa25.9■■□□□ 1.74
PPP4R1-228ENST00000584074 UBE3CQ15386 1083 aa25.9■■□□□ 1.74
PPP4R1-228ENST00000584074 SRRDQ9UH36 339 aa25.9■■□□□ 1.74
PPP4R1-228ENST00000584074 PNMA3Q9UL41 463 aa25.9■■□□□ 1.74
PPP4R1-228ENST00000584074 DDX60LQ5H9U9 1706 aaKnown RBP25.89■■□□□ 1.74
PPP4R1-228ENST00000584074 POTEFA5A3E0 1075 aa25.89■■□□□ 1.74
PPP4R1-228ENST00000584074 CYP2D6P10635 497 aa25.89■■□□□ 1.74
PPP4R1-228ENST00000584074 PRMT2P55345 433 aa25.89■■□□□ 1.74
PPP4R1-228ENST00000584074 CERKLQ49MI3 558 aaPredicted RBP25.89■■□□□ 1.74
PPP4R1-228ENST00000584074 ANKRD13CQ8N6S4 541 aa25.89■■□□□ 1.74
PPP4R1-228ENST00000584074 ZNF333Q96JL9 665 aa25.89■■□□□ 1.74
PPP4R1-228ENST00000584074 ASCC2Q9H1I8 757 aaPredicted RBP25.89■■□□□ 1.74
PPP4R1-228ENST00000584074 LOC285556D6RIA3 1793 aa25.89■■□□□ 1.73
PPP4R1-228ENST00000584074 USP17L10C9JJH3 530 aa25.88■■□□□ 1.73
PPP4R1-228ENST00000584074 FCGRTP55899 365 aa25.88■■□□□ 1.73
PPP4R1-228ENST00000584074 GABPAQ06546 454 aa25.88■■□□□ 1.73
PPP4R1-228ENST00000584074 PABPC4Q13310 644 aaKnown RBP eCLIP25.88■■□□□ 1.73
PPP4R1-228ENST00000584074 ZSCAN25Q6NSZ9 544 aa25.88■■□□□ 1.73
PPP4R1-228ENST00000584074 NBPF11Q86T75 865 aa25.88■■□□□ 1.73
PPP4R1-228ENST00000584074 OTUD7AQ8TE49 926 aaPredicted RBP25.88■■□□□ 1.73
PPP4R1-228ENST00000584074 SH3TC2Q8TF17 1288 aa25.88■■□□□ 1.73
PPP4R1-228ENST00000584074 TMOD4Q9NZQ9 345 aa25.88■■□□□ 1.73
PPP4R1-228ENST00000584074 BRCA2P51587 3418 aa25.88■■□□□ 1.73
PPP4R1-228ENST00000584074 C19orf81C9J6K1 198 aa25.87■■□□□ 1.73
PPP4R1-228ENST00000584074 HOXD10P28358 340 aa25.87■■□□□ 1.73
PPP4R1-228ENST00000584074 RAB3GAP1Q15042 981 aa25.87■■□□□ 1.73
PPP4R1-228ENST00000584074 ABCB5Q2M3G0 1257 aa25.87■■□□□ 1.73
PPP4R1-228ENST00000584074 PUS7LQ9H0K6 701 aaKnown RBP25.87■■□□□ 1.73
PPP4R1-228ENST00000584074 NAV1Q8NEY1 1877 aa25.86■■□□□ 1.73
PPP4R1-228ENST00000584074 KBTBD3Q8NAB2 608 aa25.86■■□□□ 1.73
PPP4R1-228ENST00000584074 EMILIN3Q9NT22 766 aa25.86■■□□□ 1.73
PPP4R1-228ENST00000584074 ATP8A2Q9NTI2 1148 aa25.86■■□□□ 1.73
PPP4R1-228ENST00000584074 MYPNQ86TC9 1320 aa25.86■■□□□ 1.73
PPP4R1-228ENST00000584074 MYCP01106 439 aaPredicted RBP25.85■■□□□ 1.73
PPP4R1-228ENST00000584074 PRKCZQ05513 592 aa25.85■■□□□ 1.73
PPP4R1-228ENST00000584074 GCLCP48506 637 aaPredicted RBP25.84■■□□□ 1.73
PPP4R1-228ENST00000584074 SLC44A5Q8NCS7 719 aa25.84■■□□□ 1.73
PPP4R1-228ENST00000584074 RAET1EQ8TD07 263 aa25.84■■□□□ 1.73
PPP4R1-228ENST00000584074 DYNLL2Q96FJ2 89 aa25.84■■□□□ 1.73
PPP4R1-228ENST00000584074 CABP5Q9NP86 173 aa25.84■■□□□ 1.73
PPP4R1-228ENST00000584074 GABRQQ9UN88 632 aa25.84■■□□□ 1.73
PPP4R1-228ENST00000584074 SLC4A4Q9Y6R1 1079 aa25.84■■□□□ 1.73
PPP4R1-228ENST00000584074 CYP2D7A0A087X1C5 515 aa25.83■■□□□ 1.73
PPP4R1-228ENST00000584074 SMIM22K7EJ46 135 aa25.83■■□□□ 1.73
PPP4R1-228ENST00000584074 HOXA7P31268 230 aaPredicted RBP25.83■■□□□ 1.73
PPP4R1-228ENST00000584074 IRX3P78415 501 aaPredicted RBP25.83■■□□□ 1.73
PPP4R1-228ENST00000584074 ZYXQ15942 572 aaKnown RBP25.83■■□□□ 1.73
PPP4R1-228ENST00000584074 FAM110CQ1W6H9 321 aa25.83■■□□□ 1.73
PPP4R1-228ENST00000584074 USP17L2Q6R6M4 530 aa25.83■■□□□ 1.73
PPP4R1-228ENST00000584074 ACER1Q8TDN7 264 aa25.83■■□□□ 1.73
PPP4R1-228ENST00000584074 P2RX7Q99572 595 aaKnown RBP25.83■■□□□ 1.73
PPP4R1-228ENST00000584074 FEZ1Q99689 392 aa25.83■■□□□ 1.73
PPP4R1-228ENST00000584074 TTC41PQ6P2S7 1318 aa25.83■■□□□ 1.73
PPP4R1-228ENST00000584074 TNPO2O14787 897 aaKnown RBP25.82■■□□□ 1.72
PPP4R1-228ENST00000584074 GUCY1A2P33402 732 aa25.82■■□□□ 1.72
PPP4R1-228ENST00000584074 PI4K2BQ8TCG2 481 aa25.82■■□□□ 1.72
PPP4R1-228ENST00000584074 TMEM106CQ9BVX2 250 aa25.82■■□□□ 1.72
PPP4R1-228ENST00000584074 USP17L12C9JPN9 530 aa25.81■■□□□ 1.72
PPP4R1-228ENST00000584074 USP17L21D6R901 530 aa25.81■■□□□ 1.72
PPP4R1-228ENST00000584074 MPHOSPH10O00566 681 aaKnown RBP25.81■■□□□ 1.72
PPP4R1-228ENST00000584074 EN2P19622 333 aaPredicted RBP25.81■■□□□ 1.72
PPP4R1-228ENST00000584074 SEPT2Q15019 361 aa25.81■■□□□ 1.72
PPP4R1-228ENST00000584074 ANKRD45Q5TZF3 282 aa25.81■■□□□ 1.72
PPP4R1-228ENST00000584074 C12orf60Q5U649 245 aa25.81■■□□□ 1.72
PPP4R1-228ENST00000584074 ERC2O15083 957 aa25.8■■□□□ 1.72
PPP4R1-228ENST00000584074 RNF113AO15541 343 aaKnown RBP25.8■■□□□ 1.72
PPP4R1-228ENST00000584074 GRK4P32298 578 aa25.8■■□□□ 1.72
PPP4R1-228ENST00000584074 HDAC1Q13547 482 aaPredicted RBP25.8■■□□□ 1.72
PPP4R1-228ENST00000584074 OSBP2Q969R2 916 aa25.8■■□□□ 1.72
PPP4R1-228ENST00000584074 DDRGK1Q96HY6 314 aa25.8■■□□□ 1.72
PPP4R1-228ENST00000584074 STRBPQ96SI9 672 aaKnown RBP25.8■■□□□ 1.72
PPP4R1-228ENST00000584074 KIAA1683Q9H0B3 1180 aa25.8■■□□□ 1.72
PPP4R1-228ENST00000584074 SWAP70Q9UH65 585 aa25.8■■□□□ 1.72
PPP4R1-228ENST00000584074 MKI67P46013 3256 aaKnown RBP25.8■■□□□ 1.72
PPP4R1-228ENST00000584074 PEX10O60683 326 aa25.79■■□□□ 1.72
PPP4R1-228ENST00000584074 GLRX3O76003 335 aaKnown RBP25.79■■□□□ 1.72
PPP4R1-228ENST00000584074 MX1P20591 662 aa25.79■■□□□ 1.72
PPP4R1-228ENST00000584074 FLT3LGP49771 235 aa25.79■■□□□ 1.72
PPP4R1-228ENST00000584074 HERVK_113P62684 666 aa25.79■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms