RNA–Protein interactions for RNA: ENST00000581708.5

CDK5RAP3-222, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 543 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-222ENST00000581708 DDX60LQ5H9U9 1706 aaKnown RBP15.19■□□□□ 0.02
CDK5RAP3-222ENST00000581708 MYH7P12883 1935 aa15.19■□□□□ 0.02
CDK5RAP3-222ENST00000581708 USP17L10C9JJH3 530 aa15.18■□□□□ 0.02
CDK5RAP3-222ENST00000581708 POLR3DP05423 398 aaPredicted RBP15.18■□□□□ 0.02
CDK5RAP3-222ENST00000581708 OSBPP22059 807 aa15.18■□□□□ 0.02
CDK5RAP3-222ENST00000581708 GABPAQ06546 454 aa15.18■□□□□ 0.02
CDK5RAP3-222ENST00000581708 CERKLQ49MI3 558 aaPredicted RBP15.18■□□□□ 0.02
CDK5RAP3-222ENST00000581708 KBTBD3Q8NAB2 608 aa15.18■□□□□ 0.02
CDK5RAP3-222ENST00000581708 SMCR8Q8TEV9 937 aaPredicted RBP15.18■□□□□ 0.02
CDK5RAP3-222ENST00000581708 EDC3Q96F86 508 aaKnown RBP15.18■□□□□ 0.02
CDK5RAP3-222ENST00000581708 BCL11AQ9H165 835 aa15.18■□□□□ 0.02
CDK5RAP3-222ENST00000581708 TMOD4Q9NZQ9 345 aa15.18■□□□□ 0.02
CDK5RAP3-222ENST00000581708 ZBTB47Q9UFB7 747 aaPredicted RBP15.18■□□□□ 0.02
CDK5RAP3-222ENST00000581708 SWAP70Q9UH65 585 aa15.18■□□□□ 0.02
CDK5RAP3-222ENST00000581708 NAV1Q8NEY1 1877 aa15.17■□□□□ 0.02
CDK5RAP3-222ENST00000581708 CYP2C8P10632 490 aa15.17■□□□□ 0.02
CDK5RAP3-222ENST00000581708 HOXA7P31268 230 aaPredicted RBP15.17■□□□□ 0.02
CDK5RAP3-222ENST00000581708 PSMC4P43686 418 aa15.17■□□□□ 0.02
CDK5RAP3-222ENST00000581708 HMGCS2P54868 508 aa15.17■□□□□ 0.02
CDK5RAP3-222ENST00000581708 FCGRTP55899 365 aa15.17■□□□□ 0.02
CDK5RAP3-222ENST00000581708 AMOTL1Q8IY63 956 aa15.17■□□□□ 0.02
CDK5RAP3-222ENST00000581708 LCORLQ8N3X6 602 aa15.17■□□□□ 0.02
CDK5RAP3-222ENST00000581708 CRBNQ96SW2 442 aa15.17■□□□□ 0.02
CDK5RAP3-222ENST00000581708 CABP5Q9NP86 173 aa15.17■□□□□ 0.02
CDK5RAP3-222ENST00000581708 MCM9Q9NXL9 1143 aa15.17■□□□□ 0.02
CDK5RAP3-222ENST00000581708 FRMD4AQ9P2Q2 1039 aaPredicted RBP15.17■□□□□ 0.02
CDK5RAP3-222ENST00000581708 SRRDQ9UH36 339 aa15.17■□□□□ 0.02
CDK5RAP3-222ENST00000581708 GLRX3O76003 335 aaKnown RBP15.16■□□□□ 0.02
CDK5RAP3-222ENST00000581708 MBD4O95243 580 aa15.16■□□□□ 0.02
CDK5RAP3-222ENST00000581708 GH2P01242 217 aa15.16■□□□□ 0.02
CDK5RAP3-222ENST00000581708 PLCD1P51178 756 aa15.16■□□□□ 0.02
CDK5RAP3-222ENST00000581708 CAP1Q01518 475 aa15.16■□□□□ 0.02
CDK5RAP3-222ENST00000581708 MTMR2Q13614 643 aa15.16■□□□□ 0.02
CDK5RAP3-222ENST00000581708 FAM110CQ1W6H9 321 aa15.16■□□□□ 0.02
CDK5RAP3-222ENST00000581708 ABCB5Q2M3G0 1257 aa15.16■□□□□ 0.02
CDK5RAP3-222ENST00000581708 SLC9C1Q4G0N8 1177 aa15.16■□□□□ 0.02
CDK5RAP3-222ENST00000581708 CCDC84Q86UT8 332 aaPredicted RBP15.16■□□□□ 0.02
CDK5RAP3-222ENST00000581708 TICAM2Q86XR7 235 aa15.16■□□□□ 0.02
CDK5RAP3-222ENST00000581708 GTF3C2Q8WUA4 911 aaPredicted RBP15.16■□□□□ 0.02
CDK5RAP3-222ENST00000581708 TRIM47Q96LD4 638 aa15.16■□□□□ 0.02
CDK5RAP3-222ENST00000581708 ARMT1Q9H993 441 aa15.16■□□□□ 0.02
CDK5RAP3-222ENST00000581708 GDF11O95390 407 aa15.15■□□□□ 0.02
CDK5RAP3-222ENST00000581708 FMNL1O95466 1100 aaPredicted RBP15.15■□□□□ 0.02
CDK5RAP3-222ENST00000581708 SHMT1P34896 483 aa15.15■□□□□ 0.02
CDK5RAP3-222ENST00000581708 USP14P54578 494 aa15.15■□□□□ 0.02
CDK5RAP3-222ENST00000581708 SOX10P56693 466 aa15.15■□□□□ 0.02
CDK5RAP3-222ENST00000581708 JAG1P78504 1218 aa15.15■□□□□ 0.02
CDK5RAP3-222ENST00000581708 TREML2Q5T2D2 321 aa15.15■□□□□ 0.02
CDK5RAP3-222ENST00000581708 GIMAP6Q6P9H5 292 aa15.15■□□□□ 0.02
CDK5RAP3-222ENST00000581708 USP17L2Q6R6M4 530 aa15.15■□□□□ 0.02
CDK5RAP3-222ENST00000581708 C12orf42Q96LP6 360 aa15.15■□□□□ 0.02
CDK5RAP3-222ENST00000581708 ARHGAP39Q9C0H5 1083 aa15.15■□□□□ 0.02
CDK5RAP3-222ENST00000581708 KIAA1683Q9H0B3 1180 aa15.15■□□□□ 0.02
CDK5RAP3-222ENST00000581708 ASCC2Q9H1I8 757 aaPredicted RBP15.15■□□□□ 0.02
CDK5RAP3-222ENST00000581708 PTCH2Q9Y6C5 1203 aa15.15■□□□□ 0.02
CDK5RAP3-222ENST00000581708 RBBP6Q7Z6E9 1792 aaKnown RBP15.14■□□□□ 0.01
CDK5RAP3-222ENST00000581708 GNAT2P19087 354 aa15.14■□□□□ 0.01
CDK5RAP3-222ENST00000581708 MX1P20591 662 aa15.14■□□□□ 0.01
CDK5RAP3-222ENST00000581708 SDR42E1Q8WUS8 393 aa15.14■□□□□ 0.01
CDK5RAP3-222ENST00000581708 APPBP2Q92624 585 aa15.14■□□□□ 0.01
CDK5RAP3-222ENST00000581708 ZNF333Q96JL9 665 aa15.14■□□□□ 0.01
CDK5RAP3-222ENST00000581708 CCDC17Q96LX7 622 aa15.14■□□□□ 0.01
CDK5RAP3-222ENST00000581708 RNF113AO15541 343 aaKnown RBP15.13■□□□□ 0.01
CDK5RAP3-222ENST00000581708 IRX3P78415 501 aaPredicted RBP15.13■□□□□ 0.01
CDK5RAP3-222ENST00000581708 C12orf60Q5U649 245 aa15.13■□□□□ 0.01
CDK5RAP3-222ENST00000581708 STRBPQ96SI9 672 aaKnown RBP15.13■□□□□ 0.01
CDK5RAP3-222ENST00000581708 RWDD1Q9H446 243 aaPredicted RBP15.13■□□□□ 0.01
CDK5RAP3-222ENST00000581708 MORF4L1Q9UBU8 362 aa15.13■□□□□ 0.01
CDK5RAP3-222ENST00000581708 SLC4A4Q9Y6R1 1079 aa15.13■□□□□ 0.01
CDK5RAP3-222ENST00000581708 TNRC18O15417 2968 aaPredicted RBP15.13■□□□□ 0.01
CDK5RAP3-222ENST00000581708 MGAMO43451 1857 aa15.12■□□□□ 0.01
CDK5RAP3-222ENST00000581708 CAPN2P17655 700 aa15.12■□□□□ 0.01
CDK5RAP3-222ENST00000581708 CTGFP29279 349 aa15.12■□□□□ 0.01
CDK5RAP3-222ENST00000581708 IRF5Q13568 498 aa15.12■□□□□ 0.01
CDK5RAP3-222ENST00000581708 SLC4A8Q2Y0W8 1093 aa15.12■□□□□ 0.01
CDK5RAP3-222ENST00000581708 SBK1Q52WX2 424 aa15.12■□□□□ 0.01
CDK5RAP3-222ENST00000581708 TMEM179Q6ZVK1 233 aa15.12■□□□□ 0.01
CDK5RAP3-222ENST00000581708 PI4K2BQ8TCG2 481 aa15.12■□□□□ 0.01
CDK5RAP3-222ENST00000581708 RAET1EQ8TD07 263 aa15.12■□□□□ 0.01
CDK5RAP3-222ENST00000581708 FEZ1Q99689 392 aa15.12■□□□□ 0.01
CDK5RAP3-222ENST00000581708 TMEM106CQ9BVX2 250 aa15.12■□□□□ 0.01
CDK5RAP3-222ENST00000581708 PUS7LQ9H0K6 701 aaKnown RBP15.12■□□□□ 0.01
CDK5RAP3-222ENST00000581708 ARPP21Q9UBL0 812 aaPredicted RBP15.12■□□□□ 0.01
CDK5RAP3-222ENST00000581708 STAP2Q9UGK3 403 aa15.12■□□□□ 0.01
CDK5RAP3-222ENST00000581708 MYPNQ86TC9 1320 aa15.12■□□□□ 0.01
CDK5RAP3-222ENST00000581708 SALL3Q9BXA9 1300 aa15.12■□□□□ 0.01
CDK5RAP3-222ENST00000581708 KIAA0100Q14667 2235 aaKnown RBP15.11■□□□□ 0.01
CDK5RAP3-222ENST00000581708 USP17L12C9JPN9 530 aa15.11■□□□□ 0.01
CDK5RAP3-222ENST00000581708 USP17L21D6R901 530 aa15.11■□□□□ 0.01
CDK5RAP3-222ENST00000581708 TNPO2O14787 897 aaKnown RBP15.11■□□□□ 0.01
CDK5RAP3-222ENST00000581708 PRKAB2O43741 272 aa15.11■□□□□ 0.01
CDK5RAP3-222ENST00000581708 RAB3GAP1Q15042 981 aa15.11■□□□□ 0.01
CDK5RAP3-222ENST00000581708 ANKRD45Q5TZF3 282 aa15.11■□□□□ 0.01
CDK5RAP3-222ENST00000581708 ANKRD13CQ8N6S4 541 aa15.11■□□□□ 0.01
CDK5RAP3-222ENST00000581708 SLAIN1Q8ND83 568 aa15.11■□□□□ 0.01
CDK5RAP3-222ENST00000581708 PXYLP1Q8TE99 480 aa15.11■□□□□ 0.01
CDK5RAP3-222ENST00000581708 COA7Q96BR5 231 aa15.11■□□□□ 0.01
CDK5RAP3-222ENST00000581708 EMILIN3Q9NT22 766 aa15.11■□□□□ 0.01
CDK5RAP3-222ENST00000581708 USP17L15C9J2P7 530 aa15.1■□□□□ 0.01
CDK5RAP3-222ENST00000581708 USP17L13C9JLJ4 530 aa15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms