RNA–Protein interactions for RNA: ENST00000581021.5

SS18-218, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 4

Gene SS18, Length 588 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-218ENST00000581021 OTUD7BQ6GQQ9 843 aa24.21■■□□□ 1.47
SS18-218ENST00000581021 DYNLL2Q96FJ2 89 aa24.21■■□□□ 1.47
SS18-218ENST00000581021 TRIM34Q9BYJ4 488 aa24.21■■□□□ 1.47
SS18-218ENST00000581021 EPB41L4AQ9HCS5 686 aaPredicted RBP24.21■■□□□ 1.47
SS18-218ENST00000581021 GSG1L2A8MUP6 293 aa24.2■■□□□ 1.46
SS18-218ENST00000581021 CAP1Q01518 475 aa24.2■■□□□ 1.46
SS18-218ENST00000581021 TAF1CQ15572 869 aaPredicted RBP24.2■■□□□ 1.46
SS18-218ENST00000581021 ANKRD23Q86SG2 305 aa24.2■■□□□ 1.46
SS18-218ENST00000581021 EVI5LQ96CN4 794 aa24.2■■□□□ 1.46
SS18-218ENST00000581021 OSBPL3Q9H4L5 887 aa24.2■■□□□ 1.46
SS18-218ENST00000581021 USP17L12C9JPN9 530 aa24.19■■□□□ 1.46
SS18-218ENST00000581021 USP17L21D6R901 530 aa24.19■■□□□ 1.46
SS18-218ENST00000581021 SPP2Q13103 211 aa24.19■■□□□ 1.46
SS18-218ENST00000581021 LOC285556D6RIA3 1793 aa24.19■■□□□ 1.46
SS18-218ENST00000581021 ADGRA2Q96PE1 1338 aa24.18■■□□□ 1.46
SS18-218ENST00000581021 USP17L5A8MUK1 530 aa24.18■■□□□ 1.46
SS18-218ENST00000581021 FOXP2O15409 715 aa24.18■■□□□ 1.46
SS18-218ENST00000581021 GH2P01242 217 aa24.18■■□□□ 1.46
SS18-218ENST00000581021 ASNSP08243 561 aa24.18■■□□□ 1.46
SS18-218ENST00000581021 C12orf60Q5U649 245 aa24.18■■□□□ 1.46
SS18-218ENST00000581021 CTR9Q6PD62 1173 aa24.18■■□□□ 1.46
SS18-218ENST00000581021 ZNF280CQ8ND82 737 aa24.18■■□□□ 1.46
SS18-218ENST00000581021 ZCCHC17Q9NP64 241 aaKnown RBP24.18■■□□□ 1.46
SS18-218ENST00000581021 PDHXO00330 501 aa24.17■■□□□ 1.46
SS18-218ENST00000581021 CCDC129Q6ZRS4 1044 aa24.17■■□□□ 1.46
SS18-218ENST00000581021 FKTNO75072 461 aa24.16■■□□□ 1.46
SS18-218ENST00000581021 GUCY1A2P33402 732 aa24.16■■□□□ 1.46
SS18-218ENST00000581021 TREML2Q5T2D2 321 aa24.16■■□□□ 1.46
SS18-218ENST00000581021 GADL1Q6ZQY3 521 aa24.16■■□□□ 1.46
SS18-218ENST00000581021 WDR18Q9BV38 432 aa24.16■■□□□ 1.46
SS18-218ENST00000581021 MCOLN1Q9GZU1 580 aa24.16■■□□□ 1.46
SS18-218ENST00000581021 HTTP42858 3142 aa24.15■■□□□ 1.46
SS18-218ENST00000581021 A0A0D9SFI3 127 aa24.15■■□□□ 1.46
SS18-218ENST00000581021 HMGCS2P54868 508 aa24.15■■□□□ 1.46
SS18-218ENST00000581021 MTMR2Q13614 643 aa24.15■■□□□ 1.46
SS18-218ENST00000581021 LRRFIP1Q32MZ4 808 aaKnown RBP24.15■■□□□ 1.46
SS18-218ENST00000581021 CERKLQ49MI3 558 aaPredicted RBP24.15■■□□□ 1.46
SS18-218ENST00000581021 FAM227BQ96M60 508 aa24.15■■□□□ 1.46
SS18-218ENST00000581021 ZFYVE28Q9HCC9 887 aa24.15■■□□□ 1.46
SS18-218ENST00000581021 CYP2C8P10632 490 aa24.14■■□□□ 1.45
SS18-218ENST00000581021 ABCB5Q2M3G0 1257 aa24.14■■□□□ 1.45
SS18-218ENST00000581021 FASTKD5Q7L8L6 764 aaKnown RBP24.14■■□□□ 1.45
SS18-218ENST00000581021 GINM1Q9NU53 330 aa24.14■■□□□ 1.45
SS18-218ENST00000581021 TLR2O60603 784 aa24.13■■□□□ 1.45
SS18-218ENST00000581021 SH3D19Q5HYK7 790 aa24.13■■□□□ 1.45
SS18-218ENST00000581021 GIMAP6Q6P9H5 292 aa24.13■■□□□ 1.45
SS18-218ENST00000581021 C16orf86Q6ZW13 317 aa24.13■■□□□ 1.45
SS18-218ENST00000581021 CTU1Q7Z7A3 348 aaKnown RBP24.13■■□□□ 1.45
SS18-218ENST00000581021 TBC1D2Q9BYX2 928 aa24.13■■□□□ 1.45
SS18-218ENST00000581021 ZSWIM8A7E2V4 1837 aa24.12■■□□□ 1.45
SS18-218ENST00000581021 TRIM6-TRIM34B2RNG4 842 aa24.12■■□□□ 1.45
SS18-218ENST00000581021 BACE1P56817 501 aa24.12■■□□□ 1.45
SS18-218ENST00000581021 SBK1Q52WX2 424 aa24.12■■□□□ 1.45
SS18-218ENST00000581021 CD99L2Q8TCZ2 262 aa24.12■■□□□ 1.45
SS18-218ENST00000581021 AS3MTQ9HBK9 375 aa24.12■■□□□ 1.45
SS18-218ENST00000581021 ARPP21Q9UBL0 812 aaPredicted RBP24.12■■□□□ 1.45
SS18-218ENST00000581021 AGTPBP1Q9UPW5 1226 aa24.12■■□□□ 1.45
SS18-218ENST00000581021 ROBO3Q96MS0 1386 aa24.12■■□□□ 1.45
SS18-218ENST00000581021 AKR1B1P15121 316 aa24.11■■□□□ 1.45
SS18-218ENST00000581021 GSPT1P15170 499 aaKnown RBP24.11■■□□□ 1.45
SS18-218ENST00000581021 GNAT2P19087 354 aa24.11■■□□□ 1.45
SS18-218ENST00000581021 CDK8P49336 464 aa24.11■■□□□ 1.45
SS18-218ENST00000581021 NMIQ13287 307 aaPredicted RBP24.11■■□□□ 1.45
SS18-218ENST00000581021 SEPT2Q15019 361 aa24.11■■□□□ 1.45
SS18-218ENST00000581021 RAB3GAP1Q15042 981 aa24.11■■□□□ 1.45
SS18-218ENST00000581021 VPS53Q5VIR6 699 aa24.11■■□□□ 1.45
SS18-218ENST00000581021 C17orf99Q6UX52 265 aa24.11■■□□□ 1.45
SS18-218ENST00000581021 CLEC10AQ8IUN9 316 aa24.11■■□□□ 1.45
SS18-218ENST00000581021 ACER1Q8TDN7 264 aa24.11■■□□□ 1.45
SS18-218ENST00000581021 RILPL2Q969X0 211 aa24.11■■□□□ 1.45
SS18-218ENST00000581021 DDRGK1Q96HY6 314 aa24.11■■□□□ 1.45
SS18-218ENST00000581021 SWAP70Q9UH65 585 aa24.11■■□□□ 1.45
SS18-218ENST00000581021 CPA4Q9UI42 421 aa24.11■■□□□ 1.45
SS18-218ENST00000581021 PATL2C9JE40 543 aaKnown RBP24.1■■□□□ 1.45
SS18-218ENST00000581021 SP3Q02447 781 aa24.1■■□□□ 1.45
SS18-218ENST00000581021 ZNF589Q86UQ0 364 aaPredicted RBP24.1■■□□□ 1.45
SS18-218ENST00000581021 IFNL3Q8IZI9 196 aa24.1■■□□□ 1.45
SS18-218ENST00000581021 PROCA1Q8NCQ7 364 aaPredicted RBP24.1■■□□□ 1.45
SS18-218ENST00000581021 ABHD8Q96I13 439 aa24.1■■□□□ 1.45
SS18-218ENST00000581021 SLC45A1Q9Y2W3 748 aa24.1■■□□□ 1.45
SS18-218ENST00000581021 TDO2P48775 406 aa24.09■■□□□ 1.45
SS18-218ENST00000581021 IFFO2Q5TF58 517 aa24.09■■□□□ 1.45
SS18-218ENST00000581021 PARK7Q99497 189 aaKnown RBP24.09■■□□□ 1.45
SS18-218ENST00000581021 ARHGAP39Q9C0H5 1083 aa24.09■■□□□ 1.45
SS18-218ENST00000581021 EMILIN3Q9NT22 766 aa24.09■■□□□ 1.45
SS18-218ENST00000581021 MYH8P13535 1937 aa24.08■■□□□ 1.45
SS18-218ENST00000581021 MINDY4BA8MYZ0 360 aa24.08■■□□□ 1.45
SS18-218ENST00000581021 USP17L10C9JJH3 530 aa24.08■■□□□ 1.45
SS18-218ENST00000581021 APPP05067 770 aa24.08■■□□□ 1.45
SS18-218ENST00000581021 AMOTL1Q8IY63 956 aa24.08■■□□□ 1.45
SS18-218ENST00000581021 STK11IPQ8N1F8 1099 aa24.08■■□□□ 1.45
SS18-218ENST00000581021 HELLSQ9NRZ9 838 aa24.08■■□□□ 1.45
SS18-218ENST00000581021 TAOK2Q9UL54 1235 aa24.08■■□□□ 1.45
SS18-218ENST00000581021 A0A1W2PRG0 241 aa24.07■■□□□ 1.44
SS18-218ENST00000581021 MPHOSPH10O00566 681 aaKnown RBP24.07■■□□□ 1.44
SS18-218ENST00000581021 BCRP11274 1271 aa24.07■■□□□ 1.44
SS18-218ENST00000581021 SDSP20132 328 aa24.07■■□□□ 1.44
SS18-218ENST00000581021 CTGFP29279 349 aa24.07■■□□□ 1.44
SS18-218ENST00000581021 TTC22Q5TAA0 569 aa24.07■■□□□ 1.44
SS18-218ENST00000581021 OTOP1Q7RTM1 612 aa24.07■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms