RNA–Protein interactions for RNA: ENST00000579969.1

SNORD53-201, Transcript of small nucleolar RNA, C/D box 53, humanhuman

BASIC

Gene SNORD53, Length 78 nt, Biotype snoRNA, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD53-201ENST00000579969 ANKRD18BA2A2Z9 1011 aa3.09□□□□□ -1.91
SNORD53-201ENST00000579969 DCDC2CA8MYV0 355 aa3.09□□□□□ -1.91
SNORD53-201ENST00000579969 H7C1W4 665 aa3.09□□□□□ -1.91
SNORD53-201ENST00000579969 FRAT2O75474 233 aaPredicted RBP3.09□□□□□ -1.91
SNORD53-201ENST00000579969 GLRX3O76003 335 aaKnown RBP3.09□□□□□ -1.91
SNORD53-201ENST00000579969 FGBP02675 491 aa3.09□□□□□ -1.91
SNORD53-201ENST00000579969 CSF1RP07333 972 aa3.09□□□□□ -1.91
SNORD53-201ENST00000579969 HSPA5P11021 654 aaKnown RBP3.09□□□□□ -1.91
SNORD53-201ENST00000579969 MYOGP15173 224 aa3.09□□□□□ -1.91
SNORD53-201ENST00000579969 CSF2RAP15509 400 aa3.09□□□□□ -1.91
SNORD53-201ENST00000579969 KCNA4P22459 653 aa3.09□□□□□ -1.91
SNORD53-201ENST00000579969 CYP2C19P33261 490 aa3.09□□□□□ -1.91
SNORD53-201ENST00000579969 GYG1P46976 350 aa3.09□□□□□ -1.91
SNORD53-201ENST00000579969 RABGGTBP53611 331 aa3.09□□□□□ -1.91
SNORD53-201ENST00000579969 HMGCS2P54868 508 aa3.09□□□□□ -1.91
SNORD53-201ENST00000579969 MAP3K10Q02779 954 aa3.09□□□□□ -1.91
SNORD53-201ENST00000579969 FAAP100Q0VG06 881 aa3.09□□□□□ -1.91
SNORD53-201ENST00000579969 NFIAQ12857 509 aa3.09□□□□□ -1.91
SNORD53-201ENST00000579969 TCF15Q12870 199 aa3.09□□□□□ -1.91
SNORD53-201ENST00000579969 CHAF1AQ13111 956 aaPredicted RBP3.09□□□□□ -1.91
SNORD53-201ENST00000579969 LRRC41Q15345 812 aa3.09□□□□□ -1.91
SNORD53-201ENST00000579969 EPHA10Q5JZY3 1008 aa3.09□□□□□ -1.91
SNORD53-201ENST00000579969 PPP2R2DQ66LE6 453 aa3.09□□□□□ -1.91
SNORD53-201ENST00000579969 CDC42EP5Q6NZY7 148 aa3.09□□□□□ -1.91
SNORD53-201ENST00000579969 SAMD1Q6SPF0 538 aaPredicted RBP3.09□□□□□ -1.91
SNORD53-201ENST00000579969 HHIPL2Q6UWX4 724 aa3.09□□□□□ -1.91
SNORD53-201ENST00000579969 GPR142Q7Z601 462 aa3.09□□□□□ -1.91
SNORD53-201ENST00000579969 CCDC84Q86UT8 332 aaPredicted RBP3.09□□□□□ -1.91
SNORD53-201ENST00000579969 TRPV1Q8NER1 839 aa3.09□□□□□ -1.91
SNORD53-201ENST00000579969 TBC1D22AQ8WUA7 517 aa3.09□□□□□ -1.91
SNORD53-201ENST00000579969 ATOH1Q92858 354 aaPredicted RBP3.09□□□□□ -1.91
SNORD53-201ENST00000579969 YTHDC1Q96MU7 727 aaKnown RBP3.09□□□□□ -1.91
SNORD53-201ENST00000579969 TOX2Q96NM4 488 aa3.09□□□□□ -1.91
SNORD53-201ENST00000579969 APBA2Q99767 749 aa3.09□□□□□ -1.91
SNORD53-201ENST00000579969 IRF2BPLQ9H1B7 796 aa3.09□□□□□ -1.91
SNORD53-201ENST00000579969 PORCNQ9H237 461 aa3.09□□□□□ -1.91
SNORD53-201ENST00000579969 MTIF3Q9H2K0 278 aaKnown RBP3.09□□□□□ -1.91
SNORD53-201ENST00000579969 PHAXQ9H814 394 aaKnown RBP3.09□□□□□ -1.91
SNORD53-201ENST00000579969 CERS4Q9HA82 394 aa3.09□□□□□ -1.91
SNORD53-201ENST00000579969 CWC22Q9HCG8 908 aaKnown RBP3.09□□□□□ -1.91
SNORD53-201ENST00000579969 TXNRD2Q9NNW7 524 aa3.09□□□□□ -1.91
SNORD53-201ENST00000579969 FAM86C1Q9NVL1 165 aa3.09□□□□□ -1.91
SNORD53-201ENST00000579969 FLRT1Q9NZU1 646 aa3.09□□□□□ -1.91
SNORD53-201ENST00000579969 TRPC6Q9Y210 931 aa3.09□□□□□ -1.91
SNORD53-201ENST00000579969 UTYO14607 1347 aa3.09□□□□□ -1.91
SNORD53-201ENST00000579969 GAKO14976 1311 aa3.09□□□□□ -1.91
SNORD53-201ENST00000579969 REV3LO60673 3130 aa3.09□□□□□ -1.92
SNORD53-201ENST00000579969 LTBP2Q14767 1821 aa3.09□□□□□ -1.92
SNORD53-201ENST00000579969 DCHS1Q96JQ0 3298 aa3.09□□□□□ -1.92
SNORD53-201ENST00000579969 CHD9Q3L8U1 2897 aa3.09□□□□□ -1.92
SNORD53-201ENST00000579969 ACACBO00763 2458 aa3.08□□□□□ -1.92
SNORD53-201ENST00000579969 FASNP49327 2511 aaKnown RBP3.08□□□□□ -1.92
SNORD53-201ENST00000579969 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP3.08□□□□□ -1.92
SNORD53-201ENST00000579969 MED19A0JLT2 244 aaPredicted RBP3.08□□□□□ -1.92
SNORD53-201ENST00000579969 GRXCR2A6NFK2 248 aa3.08□□□□□ -1.92
SNORD53-201ENST00000579969 SLC15A5A6NIM6 579 aa3.08□□□□□ -1.92
SNORD53-201ENST00000579969 CHL1O00533 1208 aa3.08□□□□□ -1.92
SNORD53-201ENST00000579969 SEPT4O43236 478 aa3.08□□□□□ -1.92
SNORD53-201ENST00000579969 IGKV5-2P06315 115 aa3.08□□□□□ -1.92
SNORD53-201ENST00000579969 SLURP2P0DP57 97 aa3.08□□□□□ -1.92
SNORD53-201ENST00000579969 IL9P15248 144 aa3.08□□□□□ -1.92
SNORD53-201ENST00000579969 PTPREP23469 700 aa3.08□□□□□ -1.92
SNORD53-201ENST00000579969 BRD2P25440 801 aaKnown RBP3.08□□□□□ -1.92
SNORD53-201ENST00000579969 HOXA7P31268 230 aaPredicted RBP3.08□□□□□ -1.92
SNORD53-201ENST00000579969 RIPK4P57078 832 aa3.08□□□□□ -1.92
SNORD53-201ENST00000579969 HERVK_113P62684 666 aa3.08□□□□□ -1.92
SNORD53-201ENST00000579969 ERVK-9P63128 1117 aa3.08□□□□□ -1.92
SNORD53-201ENST00000579969 ERVK-24P63145 666 aa3.08□□□□□ -1.92
SNORD53-201ENST00000579969 IRX3P78415 501 aaPredicted RBP3.08□□□□□ -1.92
SNORD53-201ENST00000579969 COL9A2Q14055 689 aaPredicted RBP3.08□□□□□ -1.92
SNORD53-201ENST00000579969 UBE4AQ14139 1066 aa3.08□□□□□ -1.92
SNORD53-201ENST00000579969 KCTD2Q14681 263 aa3.08□□□□□ -1.92
SNORD53-201ENST00000579969 PKN1Q16512 942 aa3.08□□□□□ -1.92
SNORD53-201ENST00000579969 LEXMQ3ZCV2 418 aa3.08□□□□□ -1.92
SNORD53-201ENST00000579969 SH3D19Q5HYK7 790 aa3.08□□□□□ -1.92
SNORD53-201ENST00000579969 PRAMEF19Q5SWL8 479 aa3.08□□□□□ -1.92
SNORD53-201ENST00000579969 PSRC1Q6PGN9 363 aaPredicted RBP3.08□□□□□ -1.92
SNORD53-201ENST00000579969 ANKRD33Q7Z3H0 272 aa3.08□□□□□ -1.92
SNORD53-201ENST00000579969 UBE3BQ7Z3V4 1068 aa3.08□□□□□ -1.92
SNORD53-201ENST00000579969 BMP8AQ7Z5Y6 402 aa3.08□□□□□ -1.92
SNORD53-201ENST00000579969 FBXO33Q7Z6M2 555 aa3.08□□□□□ -1.92
SNORD53-201ENST00000579969 VPS37DQ86XT2 251 aa3.08□□□□□ -1.92
SNORD53-201ENST00000579969 ZSCAN29Q8IWY8 852 aaPredicted RBP3.08□□□□□ -1.92
SNORD53-201ENST00000579969 TMEM199Q8N511 208 aa3.08□□□□□ -1.92
SNORD53-201ENST00000579969 ZNF280CQ8ND82 737 aa3.08□□□□□ -1.92
SNORD53-201ENST00000579969 GADD45GIP1Q8TAE8 222 aaPredicted RBP3.08□□□□□ -1.92
SNORD53-201ENST00000579969 NPLOC4Q8TAT6 608 aa3.08□□□□□ -1.92
SNORD53-201ENST00000579969 ARNTL2Q8WYA1 636 aa3.08□□□□□ -1.92
SNORD53-201ENST00000579969 PBXIP1Q96AQ6 731 aa3.08□□□□□ -1.92
SNORD53-201ENST00000579969 CNTNAP3BQ96NU0 1288 aa3.08□□□□□ -1.92
SNORD53-201ENST00000579969 PLEKHF1Q96S99 279 aa3.08□□□□□ -1.92
SNORD53-201ENST00000579969 PAGR1Q9BTK6 254 aa3.08□□□□□ -1.92
SNORD53-201ENST00000579969 PLA2G12BQ9BX93 195 aa3.08□□□□□ -1.92
SNORD53-201ENST00000579969 CNTNAP3Q9BZ76 1288 aa3.08□□□□□ -1.92
SNORD53-201ENST00000579969 UPF3BQ9BZI7 483 aaKnown RBP3.08□□□□□ -1.92
SNORD53-201ENST00000579969 PNNQ9H307 717 aaKnown RBP3.08□□□□□ -1.92
SNORD53-201ENST00000579969 IL23AQ9NPF7 189 aa3.08□□□□□ -1.92
SNORD53-201ENST00000579969 USP40Q9NVE5 1235 aa3.08□□□□□ -1.92
SNORD53-201ENST00000579969 FRMD4AQ9P2Q2 1039 aaPredicted RBP3.08□□□□□ -1.92
SNORD53-201ENST00000579969 FAM198AQ9UFP1 575 aa3.08□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms