RNA–Protein interactions for RNA: ENST00000578178.5

PPP4R1-208, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 4

Gene PPP4R1, Length 468 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-208ENST00000578178 PROCA1Q8NCQ7 364 aaPredicted RBP13.18□□□□□ -0.3
PPP4R1-208ENST00000578178 PI4K2BQ8TCG2 481 aa13.18□□□□□ -0.3
PPP4R1-208ENST00000578178 OTUD7AQ8TE49 926 aaPredicted RBP13.18□□□□□ -0.3
PPP4R1-208ENST00000578178 WDR18Q9BV38 432 aa13.18□□□□□ -0.3
PPP4R1-208ENST00000578178 MCM9Q9NXL9 1143 aa13.18□□□□□ -0.3
PPP4R1-208ENST00000578178 SALL3Q9BXA9 1300 aa13.17□□□□□ -0.3
PPP4R1-208ENST00000578178 CYP2C8P10632 490 aa13.17□□□□□ -0.3
PPP4R1-208ENST00000578178 PLCD1P51178 756 aa13.17□□□□□ -0.3
PPP4R1-208ENST00000578178 HMGCS2P54868 508 aa13.17□□□□□ -0.3
PPP4R1-208ENST00000578178 JAG1P78504 1218 aa13.17□□□□□ -0.3
PPP4R1-208ENST00000578178 LACTBP83111 547 aaPredicted RBP13.17□□□□□ -0.3
PPP4R1-208ENST00000578178 CAP1Q01518 475 aa13.17□□□□□ -0.3
PPP4R1-208ENST00000578178 MTMR2Q13614 643 aa13.17□□□□□ -0.3
PPP4R1-208ENST00000578178 KIF22Q14807 665 aa13.17□□□□□ -0.3
PPP4R1-208ENST00000578178 SHROOM1Q2M3G4 852 aaPredicted RBP13.17□□□□□ -0.3
PPP4R1-208ENST00000578178 SH3D19Q5HYK7 790 aa13.17□□□□□ -0.3
PPP4R1-208ENST00000578178 ANKRD45Q5TZF3 282 aa13.17□□□□□ -0.3
PPP4R1-208ENST00000578178 ATP8A2Q9NTI2 1148 aa13.17□□□□□ -0.3
PPP4R1-208ENST00000578178 CPA4Q9UI42 421 aa13.17□□□□□ -0.3
PPP4R1-208ENST00000578178 MGAMO43451 1857 aa13.16□□□□□ -0.3
PPP4R1-208ENST00000578178 PRKAB2O43741 272 aa13.16□□□□□ -0.3
PPP4R1-208ENST00000578178 GH2P01242 217 aa13.16□□□□□ -0.3
PPP4R1-208ENST00000578178 ZFYP08048 801 aaPredicted RBP13.16□□□□□ -0.3
PPP4R1-208ENST00000578178 SHMT1P34896 483 aa13.16□□□□□ -0.3
PPP4R1-208ENST00000578178 GABPAQ06546 454 aa13.16□□□□□ -0.3
PPP4R1-208ENST00000578178 LRRFIP1Q32MZ4 808 aaKnown RBP13.16□□□□□ -0.3
PPP4R1-208ENST00000578178 TREML2Q5T2D2 321 aa13.16□□□□□ -0.3
PPP4R1-208ENST00000578178 EXOC6Q8TAG9 804 aa13.16□□□□□ -0.3
PPP4R1-208ENST00000578178 APPBP2Q92624 585 aa13.16□□□□□ -0.3
PPP4R1-208ENST00000578178 DDRGK1Q96HY6 314 aa13.16□□□□□ -0.3
PPP4R1-208ENST00000578178 PUS7LQ9H0K6 701 aaKnown RBP13.16□□□□□ -0.3
PPP4R1-208ENST00000578178 PNMA3Q9UL41 463 aa13.16□□□□□ -0.3
PPP4R1-208ENST00000578178 SUPT16HQ9Y5B9 1047 aaKnown RBP13.16□□□□□ -0.3
PPP4R1-208ENST00000578178 HTTP42858 3142 aa13.16□□□□□ -0.3
PPP4R1-208ENST00000578178 RNF113AO15541 343 aaKnown RBP13.15□□□□□ -0.3
PPP4R1-208ENST00000578178 CYP2D6P10635 497 aa13.15□□□□□ -0.3
PPP4R1-208ENST00000578178 BCRP11274 1271 aa13.15□□□□□ -0.3
PPP4R1-208ENST00000578178 BACE1P56817 501 aa13.15□□□□□ -0.3
PPP4R1-208ENST00000578178 PABPC4Q13310 644 aaKnown RBP eCLIP13.15□□□□□ -0.3
PPP4R1-208ENST00000578178 CERKLQ49MI3 558 aaPredicted RBP13.15□□□□□ -0.3
PPP4R1-208ENST00000578178 AMOTL1Q8IY63 956 aa13.15□□□□□ -0.3
PPP4R1-208ENST00000578178 SMCR8Q8TEV9 937 aaPredicted RBP13.15□□□□□ -0.3
PPP4R1-208ENST00000578178 TMOD4Q9NZQ9 345 aa13.15□□□□□ -0.3
PPP4R1-208ENST00000578178 TAOK2Q9UL54 1235 aa13.15□□□□□ -0.3
PPP4R1-208ENST00000578178 PTPN22Q9Y2R2 807 aa13.15□□□□□ -0.3
PPP4R1-208ENST00000578178 SLC4A4Q9Y6R1 1079 aa13.15□□□□□ -0.3
PPP4R1-208ENST00000578178 C19orf81C9J6K1 198 aa13.14□□□□□ -0.31
PPP4R1-208ENST00000578178 USP17L10C9JJH3 530 aa13.14□□□□□ -0.31
PPP4R1-208ENST00000578178 GNRH1P01148 92 aa13.14□□□□□ -0.31
PPP4R1-208ENST00000578178 EVX2Q03828 476 aa13.14□□□□□ -0.31
PPP4R1-208ENST00000578178 ABCB5Q2M3G0 1257 aa13.14□□□□□ -0.31
PPP4R1-208ENST00000578178 SMC5Q8IY18 1101 aa13.14□□□□□ -0.31
PPP4R1-208ENST00000578178 OSBP2Q969R2 916 aa13.14□□□□□ -0.31
PPP4R1-208ENST00000578178 FSD1Q9BTV5 496 aa13.14□□□□□ -0.31
PPP4R1-208ENST00000578178 ARHGAP39Q9C0H5 1083 aa13.14□□□□□ -0.31
PPP4R1-208ENST00000578178 RWDD1Q9H446 243 aaPredicted RBP13.14□□□□□ -0.31
PPP4R1-208ENST00000578178 SWAP70Q9UH65 585 aa13.14□□□□□ -0.31
PPP4R1-208ENST00000578178 RBBP6Q7Z6E9 1792 aaKnown RBP13.14□□□□□ -0.31
PPP4R1-208ENST00000578178 SOX10P56693 466 aa13.13□□□□□ -0.31
PPP4R1-208ENST00000578178 RAB3GAP1Q15042 981 aa13.13□□□□□ -0.31
PPP4R1-208ENST00000578178 SLC44A5Q8NCS7 719 aa13.13□□□□□ -0.31
PPP4R1-208ENST00000578178 STRBPQ96SI9 672 aaKnown RBP13.13□□□□□ -0.31
PPP4R1-208ENST00000578178 FEZ1Q99689 392 aa13.13□□□□□ -0.31
PPP4R1-208ENST00000578178 CABP5Q9NP86 173 aa13.13□□□□□ -0.31
PPP4R1-208ENST00000578178 ARPP21Q9UBL0 812 aaPredicted RBP13.13□□□□□ -0.31
PPP4R1-208ENST00000578178 STAP2Q9UGK3 403 aa13.13□□□□□ -0.31
PPP4R1-208ENST00000578178 PTCH2Q9Y6C5 1203 aa13.13□□□□□ -0.31
PPP4R1-208ENST00000578178 USP17L12C9JPN9 530 aa13.12□□□□□ -0.31
PPP4R1-208ENST00000578178 USP17L21D6R901 530 aa13.12□□□□□ -0.31
PPP4R1-208ENST00000578178 M0R2C6 588 aa13.12□□□□□ -0.31
PPP4R1-208ENST00000578178 GPAA1O43292 621 aa13.12□□□□□ -0.31
PPP4R1-208ENST00000578178 OSBPP22059 807 aa13.12□□□□□ -0.31
PPP4R1-208ENST00000578178 CTGFP29279 349 aa13.12□□□□□ -0.31
PPP4R1-208ENST00000578178 PSMC4P43686 418 aa13.12□□□□□ -0.31
PPP4R1-208ENST00000578178 RGS19P49795 217 aa13.12□□□□□ -0.31
PPP4R1-208ENST00000578178 PDE1AP54750 535 aa13.12□□□□□ -0.31
PPP4R1-208ENST00000578178 PRMT2P55345 433 aa13.12□□□□□ -0.31
PPP4R1-208ENST00000578178 FAM110CQ1W6H9 321 aa13.12□□□□□ -0.31
PPP4R1-208ENST00000578178 C12orf60Q5U649 245 aa13.12□□□□□ -0.31
PPP4R1-208ENST00000578178 ARMC5Q96C12 935 aa13.12□□□□□ -0.31
PPP4R1-208ENST00000578178 DYNLL2Q96FJ2 89 aa13.12□□□□□ -0.31
PPP4R1-208ENST00000578178 TRIM47Q96LD4 638 aa13.12□□□□□ -0.31
PPP4R1-208ENST00000578178 C12orf42Q96LP6 360 aa13.12□□□□□ -0.31
PPP4R1-208ENST00000578178 LNPKQ9C0E8 428 aa13.12□□□□□ -0.31
PPP4R1-208ENST00000578178 ASCC2Q9H1I8 757 aaPredicted RBP13.12□□□□□ -0.31
PPP4R1-208ENST00000578178 ROBO3Q96MS0 1386 aa13.11□□□□□ -0.31
PPP4R1-208ENST00000578178 CYP2D7A0A087X1C5 515 aa13.11□□□□□ -0.31
PPP4R1-208ENST00000578178 MPHOSPH10O00566 681 aaKnown RBP13.11□□□□□ -0.31
PPP4R1-208ENST00000578178 ECM2O94769 699 aaPredicted RBP13.11□□□□□ -0.31
PPP4R1-208ENST00000578178 FMNL1O95466 1100 aaPredicted RBP13.11□□□□□ -0.31
PPP4R1-208ENST00000578178 GNAT2P19087 354 aa13.11□□□□□ -0.31
PPP4R1-208ENST00000578178 HOXA7P31268 230 aaPredicted RBP13.11□□□□□ -0.31
PPP4R1-208ENST00000578178 GUCY1A2P33402 732 aa13.11□□□□□ -0.31
PPP4R1-208ENST00000578178 GCLCP48506 637 aaPredicted RBP13.11□□□□□ -0.31
PPP4R1-208ENST00000578178 USP14P54578 494 aa13.11□□□□□ -0.31
PPP4R1-208ENST00000578178 FCGRTP55899 365 aa13.11□□□□□ -0.31
PPP4R1-208ENST00000578178 IRX3P78415 501 aaPredicted RBP13.11□□□□□ -0.31
PPP4R1-208ENST00000578178 GIMAP6Q6P9H5 292 aa13.11□□□□□ -0.31
PPP4R1-208ENST00000578178 USP17L2Q6R6M4 530 aa13.11□□□□□ -0.31
PPP4R1-208ENST00000578178 TMEM179Q6ZVK1 233 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms