RNA–Protein interactions for RNA: ENST00000577887.1

SNORD53B-201, Transcript of small nucleolar RNA, C/D box 53B, humanhuman

BASIC

Gene SNORD53B, Length 78 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD53B-201ENST00000577887 TGFBRAP1Q8WUH2 860 aa1.89□□□□□ -2.11
SNORD53B-201ENST00000577887 CNKSR2Q8WXI2 1034 aa1.89□□□□□ -2.11
SNORD53B-201ENST00000577887 ARHGAP45Q92619 1136 aa1.89□□□□□ -2.11
SNORD53B-201ENST00000577887 EDC3Q96F86 508 aaKnown RBP1.89□□□□□ -2.11
SNORD53B-201ENST00000577887 FAM163AQ96GL9 167 aaPredicted RBP1.89□□□□□ -2.11
SNORD53B-201ENST00000577887 XAGE2Q96GT9 111 aa1.89□□□□□ -2.11
SNORD53B-201ENST00000577887 ZBED3Q96IU2 234 aaPredicted RBP1.89□□□□□ -2.11
SNORD53B-201ENST00000577887 PAWRQ96IZ0 340 aaKnown RBP1.89□□□□□ -2.11
SNORD53B-201ENST00000577887 APBA2Q99767 749 aa1.89□□□□□ -2.11
SNORD53B-201ENST00000577887 PTPN18Q99952 460 aa1.89□□□□□ -2.11
SNORD53B-201ENST00000577887 PUS3Q9BZE2 481 aaKnown RBP1.89□□□□□ -2.11
SNORD53B-201ENST00000577887 NACAP1Q9BZK3 213 aa1.89□□□□□ -2.11
SNORD53B-201ENST00000577887 UNC93B1Q9H1C4 597 aa1.89□□□□□ -2.11
SNORD53B-201ENST00000577887 ASCC2Q9H1I8 757 aaPredicted RBP1.89□□□□□ -2.11
SNORD53B-201ENST00000577887 MROH8Q9H579 483 aa1.89□□□□□ -2.11
SNORD53B-201ENST00000577887 MCM9Q9NXL9 1143 aa1.89□□□□□ -2.11
SNORD53B-201ENST00000577887 AATFQ9NY61 560 aaKnown RBP eCLIP1.89□□□□□ -2.11not detected■■□□□ 12.3
SNORD53B-201ENST00000577887 SWAP70Q9UH65 585 aa1.89□□□□□ -2.11
SNORD53B-201ENST00000577887 SERPINB13Q9UIV8 391 aa1.89□□□□□ -2.11
SNORD53B-201ENST00000577887 MSRAQ9UJ68 235 aa1.89□□□□□ -2.11
SNORD53B-201ENST00000577887 PNMA2Q9UL42 364 aa1.89□□□□□ -2.11
SNORD53B-201ENST00000577887 ZMYND8Q9ULU4 1186 aaPredicted RBP1.89□□□□□ -2.11
SNORD53B-201ENST00000577887 NOD1Q9Y239 953 aa1.89□□□□□ -2.11
SNORD53B-201ENST00000577887 ATP11BQ9Y2G3 1177 aa1.89□□□□□ -2.11
SNORD53B-201ENST00000577887 RABGAP1Q9Y3P9 1069 aa1.89□□□□□ -2.11
SNORD53B-201ENST00000577887 DAGLAQ9Y4D2 1042 aa1.89□□□□□ -2.11
SNORD53B-201ENST00000577887 AFG3L2Q9Y4W6 797 aa1.89□□□□□ -2.11
SNORD53B-201ENST00000577887 SNCAIPQ9Y6H5 919 aa1.89□□□□□ -2.11
SNORD53B-201ENST00000577887 LAMB2P55268 1798 aa1.89□□□□□ -2.11
SNORD53B-201ENST00000577887 COL4A5P29400 1685 aa1.89□□□□□ -2.11
SNORD53B-201ENST00000577887 PDS5AQ29RF7 1337 aaKnown RBP1.89□□□□□ -2.11
SNORD53B-201ENST00000577887 IRS2Q9Y4H2 1338 aa1.89□□□□□ -2.11
SNORD53B-201ENST00000577887 LRRC37AA6NMS7 1700 aa1.88□□□□□ -2.11
SNORD53B-201ENST00000577887 TAF1P21675 1872 aa1.88□□□□□ -2.11
SNORD53B-201ENST00000577887 CENPFP49454 3210 aa1.88□□□□□ -2.11
SNORD53B-201ENST00000577887 MYO9BQ13459 2157 aa1.88□□□□□ -2.11
SNORD53B-201ENST00000577887 GPR75-ASB3A0A0A6YYF3 556 aa1.88□□□□□ -2.11
SNORD53B-201ENST00000577887 SLC15A5A6NIM6 579 aa1.88□□□□□ -2.11
SNORD53B-201ENST00000577887 WTIPA6NIX2 430 aaPredicted RBP1.88□□□□□ -2.11
SNORD53B-201ENST00000577887 ZBBXA8MT70 800 aa1.88□□□□□ -2.11
SNORD53B-201ENST00000577887 DNM1LO00429 736 aa1.88□□□□□ -2.11
SNORD53B-201ENST00000577887 ERC2O15083 957 aa1.88□□□□□ -2.11
SNORD53B-201ENST00000577887 ZBTB7BO15156 539 aaPredicted RBP1.88□□□□□ -2.11
SNORD53B-201ENST00000577887 RAB11FIP3O75154 756 aa1.88□□□□□ -2.11
SNORD53B-201ENST00000577887 NPM3O75607 178 aaKnown RBP1.88□□□□□ -2.11
SNORD53B-201ENST00000577887 GDF11O95390 407 aa1.88□□□□□ -2.11
SNORD53B-201ENST00000577887 GH2P01242 217 aa1.88□□□□□ -2.11
SNORD53B-201ENST00000577887 SUPT20HL2P0C7V6 817 aa1.88□□□□□ -2.11
SNORD53B-201ENST00000577887 FDX1P10109 184 aa1.88□□□□□ -2.11
SNORD53B-201ENST00000577887 ACTN1P12814 892 aa1.88□□□□□ -2.11
SNORD53B-201ENST00000577887 AKR1A1P14550 325 aa1.88□□□□□ -2.11
SNORD53B-201ENST00000577887 FOSL2P15408 326 aa1.88□□□□□ -2.11
SNORD53B-201ENST00000577887 SYN1P17600 705 aa1.88□□□□□ -2.11
SNORD53B-201ENST00000577887 GNAT2P19087 354 aa1.88□□□□□ -2.11
SNORD53B-201ENST00000577887 ARID4AP29374 1257 aaPredicted RBP1.88□□□□□ -2.11
SNORD53B-201ENST00000577887 HOXA7P31268 230 aaPredicted RBP1.88□□□□□ -2.11
SNORD53B-201ENST00000577887 BMP8BP34820 402 aa1.88□□□□□ -2.11
SNORD53B-201ENST00000577887 KCNJ6P48051 423 aa1.88□□□□□ -2.11
SNORD53B-201ENST00000577887 TDO2P48775 406 aa1.88□□□□□ -2.11
SNORD53B-201ENST00000577887 FXR1P51114 621 aaKnown RBP eCLIP1.88□□□□□ -2.11
SNORD53B-201ENST00000577887 ATN1P54259 1190 aaPredicted RBP1.88□□□□□ -2.11
SNORD53B-201ENST00000577887 MFAP1P55081 439 aaKnown RBP1.88□□□□□ -2.11
SNORD53B-201ENST00000577887 CASP7P55210 303 aa1.88□□□□□ -2.11
SNORD53B-201ENST00000577887 HNRNPUQ00839 825 aaKnown RBP eCLIP1.88□□□□□ -2.11
SNORD53B-201ENST00000577887 MDM2Q00987 491 aaPredicted RBP1.88□□□□□ -2.11
SNORD53B-201ENST00000577887 ICA1Q05084 483 aa1.88□□□□□ -2.11
SNORD53B-201ENST00000577887 FPGSQ05932 587 aa1.88□□□□□ -2.11
SNORD53B-201ENST00000577887 NFIAQ12857 509 aa1.88□□□□□ -2.11
SNORD53B-201ENST00000577887 TRAF1Q13077 416 aa1.88□□□□□ -2.11
SNORD53B-201ENST00000577887 MAP2K5Q13163 448 aa1.88□□□□□ -2.11
SNORD53B-201ENST00000577887 PPIGQ13427 754 aaKnown RBP eCLIP1.88□□□□□ -2.11
SNORD53B-201ENST00000577887 RASGRF1Q13972 1273 aa1.88□□□□□ -2.11
SNORD53B-201ENST00000577887 COG2Q14746 738 aa1.88□□□□□ -2.11
SNORD53B-201ENST00000577887 CSPP1Q1MSJ5 1256 aa1.88□□□□□ -2.11
SNORD53B-201ENST00000577887 LRIT3Q3SXY7 679 aa1.88□□□□□ -2.11
SNORD53B-201ENST00000577887 RABL6Q3YEC7 729 aaPredicted RBP1.88□□□□□ -2.11
SNORD53B-201ENST00000577887 TNNI3KQ59H18 835 aa1.88□□□□□ -2.11
SNORD53B-201ENST00000577887 EPHA10Q5JZY3 1008 aa1.88□□□□□ -2.11
SNORD53B-201ENST00000577887 SLC9C2Q5TAH2 1124 aa1.88□□□□□ -2.11
SNORD53B-201ENST00000577887 TMEM179Q6ZVK1 233 aa1.88□□□□□ -2.11
SNORD53B-201ENST00000577887 GPR142Q7Z601 462 aa1.88□□□□□ -2.11
SNORD53B-201ENST00000577887 SLC51AQ86UW1 340 aa1.88□□□□□ -2.11
SNORD53B-201ENST00000577887 AACSQ86V21 672 aa1.88□□□□□ -2.11
SNORD53B-201ENST00000577887 RPUSD2Q8IZ73 545 aaKnown RBP1.88□□□□□ -2.11
SNORD53B-201ENST00000577887 ANKRD35Q8N283 1001 aa1.88□□□□□ -2.11
SNORD53B-201ENST00000577887 TMEM199Q8N511 208 aa1.88□□□□□ -2.11
SNORD53B-201ENST00000577887 MRPL50Q8N5N7 158 aaKnown RBP1.88□□□□□ -2.11
SNORD53B-201ENST00000577887 CCDC155Q8N6L0 562 aa1.88□□□□□ -2.11
SNORD53B-201ENST00000577887 MAGEB6Q8N7X4 407 aa1.88□□□□□ -2.11
SNORD53B-201ENST00000577887 PCSK9Q8NBP7 692 aaKnown RBP1.88□□□□□ -2.11
SNORD53B-201ENST00000577887 RETREG2Q8NC44 543 aa1.88□□□□□ -2.11
SNORD53B-201ENST00000577887 KLHDC4Q8TBB5 520 aa1.88□□□□□ -2.11
SNORD53B-201ENST00000577887 CHURC1Q8WUH1 139 aa1.88□□□□□ -2.11
SNORD53B-201ENST00000577887 SSH1Q8WYL5 1049 aa1.88□□□□□ -2.11
SNORD53B-201ENST00000577887 LPAR1Q92633 364 aa1.88□□□□□ -2.11
SNORD53B-201ENST00000577887 CLUAP1Q96AJ1 413 aa1.88□□□□□ -2.11
SNORD53B-201ENST00000577887 NSUN4Q96CB9 384 aaKnown RBP1.88□□□□□ -2.11
SNORD53B-201ENST00000577887 KIF1BPQ96EK5 621 aa1.88□□□□□ -2.11
SNORD53B-201ENST00000577887 RNPC3Q96LT9 517 aaKnown RBP1.88□□□□□ -2.11
SNORD53B-201ENST00000577887 CCDC17Q96LX7 622 aa1.88□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms