RNA–Protein interactions for RNA: ENST00000569122.1

SMG1-216, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 562 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-216ENST00000569122 SLC15A5A6NIM6 579 aa10.75□□□□□ -0.69
SMG1-216ENST00000569122 MTMR2Q13614 643 aa10.75□□□□□ -0.69
SMG1-216ENST00000569122 CCL14Q16627 93 aa10.75□□□□□ -0.69
SMG1-216ENST00000569122 SLC39A5Q6ZMH5 540 aa10.75□□□□□ -0.69
SMG1-216ENST00000569122 BADQ92934 168 aa10.75□□□□□ -0.69
SMG1-216ENST00000569122 NOL10Q9BSC4 688 aaKnown RBP10.75□□□□□ -0.69
SMG1-216ENST00000569122 TRIM34Q9BYJ4 488 aa10.75□□□□□ -0.69
SMG1-216ENST00000569122 TXNRD2Q9NNW7 524 aa10.75□□□□□ -0.69
SMG1-216ENST00000569122 FRMD4AQ9P2Q2 1039 aaPredicted RBP10.75□□□□□ -0.69
SMG1-216ENST00000569122 ARIH1Q9Y4X5 557 aaPredicted RBP10.75□□□□□ -0.69
SMG1-216ENST00000569122 TACC3Q9Y6A5 838 aa10.75□□□□□ -0.69
SMG1-216ENST00000569122 HSFX4A0A1B0GTS1 333 aaPredicted RBP10.74□□□□□ -0.69
SMG1-216ENST00000569122 HSFX3A0A1B0GWH4 333 aaPredicted RBP10.74□□□□□ -0.69
SMG1-216ENST00000569122 HOXC6P09630 235 aa10.74□□□□□ -0.69
SMG1-216ENST00000569122 IL15P40933 162 aaPredicted RBP10.74□□□□□ -0.69
SMG1-216ENST00000569122 PHKA1P46020 1223 aa10.74□□□□□ -0.69
SMG1-216ENST00000569122 RHBDL3P58872 404 aa10.74□□□□□ -0.69
SMG1-216ENST00000569122 Q3C1V9 767 aa10.74□□□□□ -0.69
SMG1-216ENST00000569122 C9orf50Q5SZB4 431 aa10.74□□□□□ -0.69
SMG1-216ENST00000569122 C1orf53Q5VUE5 145 aa10.74□□□□□ -0.69
SMG1-216ENST00000569122 CCDC102BQ68D86 513 aa10.74□□□□□ -0.69
SMG1-216ENST00000569122 USP17L2Q6R6M4 530 aa10.74□□□□□ -0.69
SMG1-216ENST00000569122 FOXP4Q8IVH2 680 aaPredicted RBP10.74□□□□□ -0.69
SMG1-216ENST00000569122 RNPC3Q96LT9 517 aaKnown RBP10.74□□□□□ -0.69
SMG1-216ENST00000569122 GAS2L1Q99501 681 aaPredicted RBP10.74□□□□□ -0.69
SMG1-216ENST00000569122 PAGR1Q9BTK6 254 aa10.74□□□□□ -0.69
SMG1-216ENST00000569122 SLC5A4Q9NY91 659 aa10.74□□□□□ -0.69
SMG1-216ENST00000569122 DDX60LQ5H9U9 1706 aaKnown RBP10.74□□□□□ -0.69
SMG1-216ENST00000569122 A0A1B0GUL6 1792 aa10.74□□□□□ -0.69
SMG1-216ENST00000569122 PLCG2P16885 1265 aa10.73□□□□□ -0.69
SMG1-216ENST00000569122 PTPREP23469 700 aa10.73□□□□□ -0.69
SMG1-216ENST00000569122 CCDC174Q6PII3 467 aa10.73□□□□□ -0.69
SMG1-216ENST00000569122 ATF7IPQ6VMQ6 1270 aa10.73□□□□□ -0.69
SMG1-216ENST00000569122 ATG9AQ7Z3C6 839 aa10.73□□□□□ -0.69
SMG1-216ENST00000569122 C1QTNF1Q9BXJ1 281 aa10.73□□□□□ -0.69
SMG1-216ENST00000569122 PORCNQ9H237 461 aa10.73□□□□□ -0.69
SMG1-216ENST00000569122 AKAP2Q9Y2D5 859 aa10.73□□□□□ -0.69
SMG1-216ENST00000569122 PTPRCP08575 1304 aa10.73□□□□□ -0.69
SMG1-216ENST00000569122 PRUNE2Q8WUY3 3088 aa10.73□□□□□ -0.69
SMG1-216ENST00000569122 EYSQ5T1H1 3165 aa10.73□□□□□ -0.69
SMG1-216ENST00000569122 ALPK3Q96L96 1907 aa10.72□□□□□ -0.69
SMG1-216ENST00000569122 MUC3AQ02505 3323 aa10.72□□□□□ -0.69
SMG1-216ENST00000569122 FAM196BA6NMK8 535 aa10.72□□□□□ -0.69
SMG1-216ENST00000569122 USP17L15C9J2P7 530 aa10.72□□□□□ -0.69
SMG1-216ENST00000569122 USP17L13C9JLJ4 530 aa10.72□□□□□ -0.69
SMG1-216ENST00000569122 USP17L11C9JVI0 530 aa10.72□□□□□ -0.69
SMG1-216ENST00000569122 USP17L18D6R9N7 530 aa10.72□□□□□ -0.69
SMG1-216ENST00000569122 USP17L22D6RA61 530 aa10.72□□□□□ -0.69
SMG1-216ENST00000569122 USP17L17D6RBQ6 530 aa10.72□□□□□ -0.69
SMG1-216ENST00000569122 USP17L19D6RCP7 530 aa10.72□□□□□ -0.69
SMG1-216ENST00000569122 USP17L20D6RJB6 530 aa10.72□□□□□ -0.69
SMG1-216ENST00000569122 STRNO43815 780 aa10.72□□□□□ -0.69
SMG1-216ENST00000569122 BAG3O95817 575 aa10.72□□□□□ -0.69
SMG1-216ENST00000569122 SLURP2P0DP57 97 aa10.72□□□□□ -0.69
SMG1-216ENST00000569122 RFX5P48382 616 aaPredicted RBP10.72□□□□□ -0.69
SMG1-216ENST00000569122 USP14P54578 494 aa10.72□□□□□ -0.69
SMG1-216ENST00000569122 MRPS5P82675 430 aaKnown RBP10.72□□□□□ -0.69
SMG1-216ENST00000569122 MECOMQ03112 1051 aa10.72□□□□□ -0.69
SMG1-216ENST00000569122 USP17L24Q0WX57 530 aa10.72□□□□□ -0.69
SMG1-216ENST00000569122 MAP3K12Q12852 859 aa10.72□□□□□ -0.69
SMG1-216ENST00000569122 MVPQ14764 893 aaKnown RBP10.72□□□□□ -0.69
SMG1-216ENST00000569122 SNX17Q15036 470 aa10.72□□□□□ -0.69
SMG1-216ENST00000569122 AKNAD1Q5T1N1 836 aa10.72□□□□□ -0.69
SMG1-216ENST00000569122 WDR78Q5VTH9 848 aa10.72□□□□□ -0.69
SMG1-216ENST00000569122 CRACR2BQ8N4Y2 399 aaPredicted RBP10.72□□□□□ -0.69
SMG1-216ENST00000569122 ASB2Q96Q27 587 aa10.72□□□□□ -0.69
SMG1-216ENST00000569122 USP44Q9H0E7 712 aa10.72□□□□□ -0.69
SMG1-216ENST00000569122 TSPYL2Q9H2G4 693 aaPredicted RBP10.72□□□□□ -0.69
SMG1-216ENST00000569122 SEPT4O43236 478 aa10.71□□□□□ -0.69
SMG1-216ENST00000569122 DNAJB2P25686 324 aa10.71□□□□□ -0.69
SMG1-216ENST00000569122 HOXD11P31277 338 aaPredicted RBP10.71□□□□□ -0.69
SMG1-216ENST00000569122 RASGRF1Q13972 1273 aa10.71□□□□□ -0.69
SMG1-216ENST00000569122 GRB14Q14449 540 aa10.71□□□□□ -0.69
SMG1-216ENST00000569122 GRIN2CQ14957 1233 aa10.71□□□□□ -0.69
SMG1-216ENST00000569122 GJC2Q5T442 439 aaPredicted RBP10.71□□□□□ -0.69
SMG1-216ENST00000569122 AK9Q5TCS8 1911 aa10.71□□□□□ -0.69
SMG1-216ENST00000569122 OLFML2BQ68BL8 750 aa10.71□□□□□ -0.69
SMG1-216ENST00000569122 DPP9Q86TI2 863 aa10.71□□□□□ -0.69
SMG1-216ENST00000569122 TEX11Q8IYF3 940 aa10.71□□□□□ -0.69
SMG1-216ENST00000569122 UHRF1Q96T88 793 aaPredicted RBP10.71□□□□□ -0.69
SMG1-216ENST00000569122 SIL1Q9H173 461 aa10.71□□□□□ -0.69
SMG1-216ENST00000569122 ZNF576Q9H609 170 aa10.71□□□□□ -0.69
SMG1-216ENST00000569122 PDLIM7Q9NR12 457 aa10.71□□□□□ -0.69
SMG1-216ENST00000569122 THEGQ9P2T0 379 aa10.71□□□□□ -0.69
SMG1-216ENST00000569122 IGSF3O75054 1194 aa10.7□□□□□ -0.7
SMG1-216ENST00000569122 RAG1P15918 1043 aa10.7□□□□□ -0.7
SMG1-216ENST00000569122 TRIM60Q495X7 471 aa10.7□□□□□ -0.7
SMG1-216ENST00000569122 ADAMTS19Q8TE59 1207 aa10.7□□□□□ -0.7
SMG1-216ENST00000569122 TIFAQ96CG3 184 aa10.7□□□□□ -0.7
SMG1-216ENST00000569122 C12orf42Q96LP6 360 aa10.7□□□□□ -0.7
SMG1-216ENST00000569122 CACNA1FO60840 1977 aa10.7□□□□□ -0.7
SMG1-216ENST00000569122 TRIM43BA6NCK2 446 aa10.69□□□□□ -0.7
SMG1-216ENST00000569122 HLA-DOAP06340 250 aa10.69□□□□□ -0.7
SMG1-216ENST00000569122 CLTBP09497 229 aa10.69□□□□□ -0.7
SMG1-216ENST00000569122 CYBAP13498 195 aa10.69□□□□□ -0.7
SMG1-216ENST00000569122 CYP2C19P33261 490 aa10.69□□□□□ -0.7
SMG1-216ENST00000569122 FPGSQ05932 587 aa10.69□□□□□ -0.7
SMG1-216ENST00000569122 RRP1BQ14684 758 aaKnown RBP10.69□□□□□ -0.7
SMG1-216ENST00000569122 LBX2Q6XYB7 198 aa10.69□□□□□ -0.7
SMG1-216ENST00000569122 METTL16Q86W50 562 aaKnown RBP10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 129.6 ms