RNA–Protein interactions for RNA: ENST00000560777.5

RABGGTA-218, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5 BASIC

Gene RABGGTA, Length 1,197 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-218ENST00000560777 SWAP70Q9UH65 585 aa14.27□□□□□ -0.13
RABGGTA-218ENST00000560777 ZHX2Q9Y6X8 837 aa14.27□□□□□ -0.13
RABGGTA-218ENST00000560777 MAP2K1Q02750 393 aaPredicted RBP14.26□□□□□ -0.13
RABGGTA-218ENST00000560777 PPIL2Q13356 520 aa14.26□□□□□ -0.13
RABGGTA-218ENST00000560777 CCDC84Q86UT8 332 aaPredicted RBP14.26□□□□□ -0.13
RABGGTA-218ENST00000560777 REM2Q8IYK8 340 aaPredicted RBP14.26□□□□□ -0.13
RABGGTA-218ENST00000560777 RUFY2Q8WXA3 655 aa14.26□□□□□ -0.13
RABGGTA-218ENST00000560777 WBP1LQ9NX94 342 aa14.26□□□□□ -0.13
RABGGTA-218ENST00000560777 AFG3L2Q9Y4W6 797 aa14.26□□□□□ -0.13
RABGGTA-218ENST00000560777 TESPA1A2RU30 521 aaPredicted RBP14.25□□□□□ -0.13
RABGGTA-218ENST00000560777 MANSC4A6NHS7 340 aaPredicted RBP14.25□□□□□ -0.13
RABGGTA-218ENST00000560777 SGSM2O43147 1006 aa14.25□□□□□ -0.13
RABGGTA-218ENST00000560777 GH2P01242 217 aa14.25□□□□□ -0.13
RABGGTA-218ENST00000560777 ASNSP08243 561 aa14.25□□□□□ -0.13
RABGGTA-218ENST00000560777 INHBEP58166 350 aa14.25□□□□□ -0.13
RABGGTA-218ENST00000560777 PPARAQ07869 468 aa14.25□□□□□ -0.13
RABGGTA-218ENST00000560777 STK11IPQ8N1F8 1099 aa14.25□□□□□ -0.13
RABGGTA-218ENST00000560777 GINM1Q9NU53 330 aa14.25□□□□□ -0.13
RABGGTA-218ENST00000560777 KCNH4Q9UQ05 1017 aa14.25□□□□□ -0.13
RABGGTA-218ENST00000560777 RAD50Q92878 1312 aa14.24□□□□□ -0.13
RABGGTA-218ENST00000560777 THSD7BQ9C0I4 1608 aa14.24□□□□□ -0.13
RABGGTA-218ENST00000560777 USP17L5A8MUK1 530 aa14.24□□□□□ -0.13
RABGGTA-218ENST00000560777 CXCL11O14625 94 aa14.24□□□□□ -0.13
RABGGTA-218ENST00000560777 GUCY1A2P33402 732 aa14.24□□□□□ -0.13
RABGGTA-218ENST00000560777 GTF2A2P52657 109 aa14.24□□□□□ -0.13
RABGGTA-218ENST00000560777 ABCB5Q2M3G0 1257 aa14.24□□□□□ -0.13
RABGGTA-218ENST00000560777 PTPN18Q99952 460 aa14.24□□□□□ -0.13
RABGGTA-218ENST00000560777 DSCC1Q9BVC3 393 aa14.24□□□□□ -0.13
RABGGTA-218ENST00000560777 ANAPC4Q9UJX5 808 aa14.24□□□□□ -0.13
RABGGTA-218ENST00000560777 ZBTB21Q9ULJ3 1066 aa14.24□□□□□ -0.13
RABGGTA-218ENST00000560777 ROBO3Q96MS0 1386 aa14.23□□□□□ -0.13
RABGGTA-218ENST00000560777 ZMYM6O95789 1325 aa14.23□□□□□ -0.13
RABGGTA-218ENST00000560777 AKR1B1P15121 316 aa14.23□□□□□ -0.13
RABGGTA-218ENST00000560777 CTDSPL2Q05D32 466 aa14.23□□□□□ -0.13
RABGGTA-218ENST00000560777 SREBF2Q12772 1141 aa14.23□□□□□ -0.13
RABGGTA-218ENST00000560777 SPP2Q13103 211 aa14.23□□□□□ -0.13
RABGGTA-218ENST00000560777 SNAPC2Q13487 334 aa14.23□□□□□ -0.13
RABGGTA-218ENST00000560777 ZNF280CQ8ND82 737 aa14.23□□□□□ -0.13
RABGGTA-218ENST00000560777 BRI3BPQ8WY22 251 aa14.23□□□□□ -0.13
RABGGTA-218ENST00000560777 WDR18Q9BV38 432 aa14.23□□□□□ -0.13
RABGGTA-218ENST00000560777 CABP5Q9NP86 173 aa14.23□□□□□ -0.13
RABGGTA-218ENST00000560777 INCENPQ9NQS7 918 aa14.23□□□□□ -0.13
RABGGTA-218ENST00000560777 TACC3Q9Y6A5 838 aa14.23□□□□□ -0.13
RABGGTA-218ENST00000560777 DOCK1Q14185 1865 aa14.23□□□□□ -0.13
RABGGTA-218ENST00000560777 CCL15-CCL14A0A0B4J2E2 113 aa14.22□□□□□ -0.13
RABGGTA-218ENST00000560777 TRIM75PA6NK02 468 aa14.22□□□□□ -0.13
RABGGTA-218ENST00000560777 MPHOSPH10O00566 681 aaKnown RBP14.22□□□□□ -0.13
RABGGTA-218ENST00000560777 PRDM1O75626 825 aa14.22□□□□□ -0.13
RABGGTA-218ENST00000560777 CETPP11597 493 aa14.22□□□□□ -0.13
RABGGTA-218ENST00000560777 RASA1P20936 1047 aa14.22□□□□□ -0.13
RABGGTA-218ENST00000560777 PTH1RQ03431 593 aa14.22□□□□□ -0.13
RABGGTA-218ENST00000560777 MOGSQ13724 837 aa14.22□□□□□ -0.13
RABGGTA-218ENST00000560777 SEPT2Q15019 361 aa14.22□□□□□ -0.13
RABGGTA-218ENST00000560777 CCL15Q16663 113 aa14.22□□□□□ -0.13
RABGGTA-218ENST00000560777 IFNL1Q8IU54 200 aa14.22□□□□□ -0.13
RABGGTA-218ENST00000560777 CCDC17Q96LX7 622 aa14.22□□□□□ -0.13
RABGGTA-218ENST00000560777 ESYT1Q9BSJ8 1104 aa14.22□□□□□ -0.13
RABGGTA-218ENST00000560777 TBC1D2Q9BYX2 928 aa14.22□□□□□ -0.13
RABGGTA-218ENST00000560777 MKNK2Q9HBH9 465 aa14.22□□□□□ -0.13
RABGGTA-218ENST00000560777 RNF186Q9NXI6 227 aa14.22□□□□□ -0.13
RABGGTA-218ENST00000560777 PHIPQ8WWQ0 1821 aa14.21□□□□□ -0.13
RABGGTA-218ENST00000560777 ATAD5Q96QE3 1844 aa14.21□□□□□ -0.13
RABGGTA-218ENST00000560777 A0A0G2JLL6 359 aaPredicted RBP14.21□□□□□ -0.13
RABGGTA-218ENST00000560777 IGF2BP3O00425 579 aaKnown RBP eCLIP14.21□□□□□ -0.13
RABGGTA-218ENST00000560777 SLC3A2P08195 630 aaKnown RBP14.21□□□□□ -0.13
RABGGTA-218ENST00000560777 FGRP09769 529 aa14.21□□□□□ -0.13
RABGGTA-218ENST00000560777 HSPA1AP0DMV8 641 aaKnown RBP14.21□□□□□ -0.13
RABGGTA-218ENST00000560777 HSPA1BP0DMV9 641 aaKnown RBP14.21□□□□□ -0.13
RABGGTA-218ENST00000560777 RAB3GAP1Q15042 981 aa14.21□□□□□ -0.13
RABGGTA-218ENST00000560777 PRRT2Q7Z6L0 340 aaPredicted RBP14.21□□□□□ -0.13
RABGGTA-218ENST00000560777 GNL3Q9BVP2 549 aaKnown RBP eCLIP14.21□□□□□ -0.13
RABGGTA-218ENST00000560777 NBPF3Q9H094 633 aa14.21□□□□□ -0.13
RABGGTA-218ENST00000560777 AS3MTQ9HBK9 375 aa14.21□□□□□ -0.13
RABGGTA-218ENST00000560777 ZNF287Q9HBT7 754 aa14.21□□□□□ -0.13
RABGGTA-218ENST00000560777 DDX52Q9Y2R4 599 aaKnown RBP eCLIP14.21□□□□□ -0.13
RABGGTA-218ENST00000560777 BTBD19C9JJ37 291 aa14.2□□□□□ -0.14
RABGGTA-218ENST00000560777 ZNF213O14771 459 aa14.2□□□□□ -0.14
RABGGTA-218ENST00000560777 CDC45O75419 566 aa14.2□□□□□ -0.14
RABGGTA-218ENST00000560777 TRPA1O75762 1119 aa14.2□□□□□ -0.14
RABGGTA-218ENST00000560777 BACE1P56817 501 aa14.2□□□□□ -0.14
RABGGTA-218ENST00000560777 HAND2P61296 217 aa14.2□□□□□ -0.14
RABGGTA-218ENST00000560777 PDE4BQ07343 736 aa14.2□□□□□ -0.14
RABGGTA-218ENST00000560777 TMEM179Q6ZVK1 233 aa14.2□□□□□ -0.14
RABGGTA-218ENST00000560777 SIAH1Q8IUQ4 282 aa14.2□□□□□ -0.14
RABGGTA-218ENST00000560777 ZNF444Q8N0Y2 327 aaPredicted RBP14.2□□□□□ -0.14
RABGGTA-218ENST00000560777 MAP4K1Q92918 833 aa14.2□□□□□ -0.14
RABGGTA-218ENST00000560777 BEGAINQ9BUH8 593 aa14.2□□□□□ -0.14
RABGGTA-218ENST00000560777 CTNNA3Q9UI47 895 aa14.2□□□□□ -0.14
RABGGTA-218ENST00000560777 LAMB1P07942 1786 aa14.19□□□□□ -0.14
RABGGTA-218ENST00000560777 USP17L10C9JJH3 530 aa14.19□□□□□ -0.14
RABGGTA-218ENST00000560777 FOXN1O15353 648 aa14.19□□□□□ -0.14
RABGGTA-218ENST00000560777 SH3D19Q5HYK7 790 aa14.19□□□□□ -0.14
RABGGTA-218ENST00000560777 GPAT2Q6NUI2 795 aa14.19□□□□□ -0.14
RABGGTA-218ENST00000560777 FASTKD5Q7L8L6 764 aaKnown RBP14.19□□□□□ -0.14
RABGGTA-218ENST00000560777 FAM43AQ8N2R8 423 aa14.19□□□□□ -0.14
RABGGTA-218ENST00000560777 ACER1Q8TDN7 264 aa14.19□□□□□ -0.14
RABGGTA-218ENST00000560777 LSG1Q9H089 658 aaKnown RBP14.19□□□□□ -0.14
RABGGTA-218ENST00000560777 A0A1W2PRG0 241 aa14.18□□□□□ -0.14
RABGGTA-218ENST00000560777 C19orf81C9J6K1 198 aa14.18□□□□□ -0.14
RABGGTA-218ENST00000560777 CA12O43570 354 aa14.18□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms