RNA–Protein interactions for RNA: ENST00000558879.5

LRRC28-210, Transcript of leucine rich repeat containing 28, humanhuman

TSL 4 BASIC

Gene LRRC28, Length 581 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-210ENST00000558879 RLFQ13129 1914 aa20.64■□□□□ 0.89
LRRC28-210ENST00000558879 MAGEB6P1A0A0J9YX57 407 aa20.63■□□□□ 0.89
LRRC28-210ENST00000558879 POTEFA5A3E0 1075 aa20.63■□□□□ 0.89
LRRC28-210ENST00000558879 GDF11O95390 407 aa20.63■□□□□ 0.89
LRRC28-210ENST00000558879 OSBPP22059 807 aa20.63■□□□□ 0.89
LRRC28-210ENST00000558879 SLC4A8Q2Y0W8 1093 aa20.63■□□□□ 0.89
LRRC28-210ENST00000558879 DCTPP1Q9H773 170 aa20.63■□□□□ 0.89
LRRC28-210ENST00000558879 SRRDQ9UH36 339 aa20.63■□□□□ 0.89
LRRC28-210ENST00000558879 PNMA3Q9UL41 463 aa20.63■□□□□ 0.89
LRRC28-210ENST00000558879 A0A0G2JMZ2 1700 aa20.63■□□□□ 0.89
LRRC28-210ENST00000558879 MKI67P46013 3256 aaKnown RBP20.62■□□□□ 0.89
LRRC28-210ENST00000558879 ADD2P35612 726 aa20.62■□□□□ 0.89
LRRC28-210ENST00000558879 RRP1P56182 461 aaKnown RBP20.62■□□□□ 0.89
LRRC28-210ENST00000558879 TRIM34Q9BYJ4 488 aa20.62■□□□□ 0.89
LRRC28-210ENST00000558879 SERPINB13Q9UIV8 391 aa20.62■□□□□ 0.89
LRRC28-210ENST00000558879 SMARCA5O60264 1052 aaPredicted RBP20.61■□□□□ 0.89
LRRC28-210ENST00000558879 BACE1P56817 501 aa20.61■□□□□ 0.89
LRRC28-210ENST00000558879 MTMR2Q13614 643 aa20.61■□□□□ 0.89
LRRC28-210ENST00000558879 FAM110CQ1W6H9 321 aa20.61■□□□□ 0.89
LRRC28-210ENST00000558879 TTC6Q86TZ1 520 aa20.61■□□□□ 0.89
LRRC28-210ENST00000558879 LCORLQ8N3X6 602 aa20.61■□□□□ 0.89
LRRC28-210ENST00000558879 SMCR8Q8TEV9 937 aaPredicted RBP20.61■□□□□ 0.89
LRRC28-210ENST00000558879 CRNKL1Q9BZJ0 848 aaKnown RBP20.61■□□□□ 0.89
LRRC28-210ENST00000558879 MYPNQ86TC9 1320 aa20.6■□□□□ 0.89
LRRC28-210ENST00000558879 FCGRTP55899 365 aa20.6■□□□□ 0.89
LRRC28-210ENST00000558879 GABPAQ06546 454 aa20.6■□□□□ 0.89
LRRC28-210ENST00000558879 NBPF11Q86T75 865 aa20.6■□□□□ 0.89
LRRC28-210ENST00000558879 ECM2O94769 699 aaPredicted RBP20.59■□□□□ 0.89
LRRC28-210ENST00000558879 FMNL1O95466 1100 aaPredicted RBP20.59■□□□□ 0.89
LRRC28-210ENST00000558879 HOXD10P28358 340 aa20.59■□□□□ 0.89
LRRC28-210ENST00000558879 PLCD1P51178 756 aa20.59■□□□□ 0.89
LRRC28-210ENST00000558879 PABPC4Q13310 644 aaKnown RBP eCLIP20.59■□□□□ 0.89
LRRC28-210ENST00000558879 SH3TC2Q8TF17 1288 aa20.59■□□□□ 0.89
LRRC28-210ENST00000558879 BCL11AQ9H165 835 aa20.59■□□□□ 0.89
LRRC28-210ENST00000558879 C19orf81C9J6K1 198 aa20.58■□□□□ 0.89
LRRC28-210ENST00000558879 GH2P01242 217 aa20.58■□□□□ 0.89
LRRC28-210ENST00000558879 SHMT1P34896 483 aa20.58■□□□□ 0.89
LRRC28-210ENST00000558879 PRKCZQ05513 592 aa20.58■□□□□ 0.89
LRRC28-210ENST00000558879 SLFNL1Q499Z3 407 aa20.58■□□□□ 0.89
LRRC28-210ENST00000558879 SDR42E1Q8WUS8 393 aa20.58■□□□□ 0.89
LRRC28-210ENST00000558879 DDX24Q9GZR7 859 aaKnown RBP eCLIP20.58■□□□□ 0.89
LRRC28-210ENST00000558879 ASCC2Q9H1I8 757 aaPredicted RBP20.58■□□□□ 0.89
LRRC28-210ENST00000558879 DCP1AQ9NPI6 582 aaPredicted RBP20.58■□□□□ 0.89
LRRC28-210ENST00000558879 PCDHB15Q9Y5E8 787 aa20.58■□□□□ 0.89
LRRC28-210ENST00000558879 FRMPD3Q5JV73 1810 aa20.57■□□□□ 0.88
LRRC28-210ENST00000558879 MYH4Q9Y623 1939 aa20.57■□□□□ 0.88
LRRC28-210ENST00000558879 USP17L10C9JJH3 530 aa20.57■□□□□ 0.88
LRRC28-210ENST00000558879 CHGBP05060 677 aa20.57■□□□□ 0.88
LRRC28-210ENST00000558879 HOXA7P31268 230 aaPredicted RBP20.57■□□□□ 0.88
LRRC28-210ENST00000558879 GCLCP48506 637 aaPredicted RBP20.57■□□□□ 0.88
LRRC28-210ENST00000558879 EVX2Q03828 476 aa20.57■□□□□ 0.88
LRRC28-210ENST00000558879 UBE3CQ15386 1083 aa20.57■□□□□ 0.88
LRRC28-210ENST00000558879 ANKRD13CQ8N6S4 541 aa20.57■□□□□ 0.88
LRRC28-210ENST00000558879 ARMT1Q9H993 441 aa20.57■□□□□ 0.88
LRRC28-210ENST00000558879 ECHDC1Q9NTX5 307 aa20.57■□□□□ 0.88
LRRC28-210ENST00000558879 COL11A1P12107 1806 aaPredicted RBP20.57■□□□□ 0.88
LRRC28-210ENST00000558879 MBD4O95243 580 aa20.56■□□□□ 0.88
LRRC28-210ENST00000558879 GRK4P32298 578 aa20.56■□□□□ 0.88
LRRC28-210ENST00000558879 C12orf42Q96LP6 360 aa20.56■□□□□ 0.88
LRRC28-210ENST00000558879 MCM9Q9NXL9 1143 aa20.56■□□□□ 0.88
LRRC28-210ENST00000558879 TMOD4Q9NZQ9 345 aa20.56■□□□□ 0.88
LRRC28-210ENST00000558879 GABRQQ9UN88 632 aa20.56■□□□□ 0.88
LRRC28-210ENST00000558879 CERKLQ49MI3 558 aaPredicted RBP20.55■□□□□ 0.88
LRRC28-210ENST00000558879 RAET1EQ8TD07 263 aa20.55■□□□□ 0.88
LRRC28-210ENST00000558879 MORF4L1Q9UBU8 362 aa20.55■□□□□ 0.88
LRRC28-210ENST00000558879 TAOK2Q9UL54 1235 aa20.55■□□□□ 0.88
LRRC28-210ENST00000558879 POLR3DP05423 398 aaPredicted RBP20.54■□□□□ 0.88
LRRC28-210ENST00000558879 EN2P19622 333 aaPredicted RBP20.54■□□□□ 0.88
LRRC28-210ENST00000558879 GUCY1A2P33402 732 aa20.54■□□□□ 0.88
LRRC28-210ENST00000558879 ABCB5Q2M3G0 1257 aa20.54■□□□□ 0.88
LRRC28-210ENST00000558879 TMEM106CQ9BVX2 250 aa20.54■□□□□ 0.88
LRRC28-210ENST00000558879 EMILIN3Q9NT22 766 aa20.54■□□□□ 0.88
LRRC28-210ENST00000558879 ATP8A2Q9NTI2 1148 aa20.54■□□□□ 0.88
LRRC28-210ENST00000558879 ZNF236Q9UL36 1845 aa20.54■□□□□ 0.88
LRRC28-210ENST00000558879 ALPK3Q96L96 1907 aa20.53■□□□□ 0.88
LRRC28-210ENST00000558879 TNPO2O14787 897 aaKnown RBP20.53■□□□□ 0.88
LRRC28-210ENST00000558879 PRKAB2O43741 272 aa20.53■□□□□ 0.88
LRRC28-210ENST00000558879 IRX3P78415 501 aaPredicted RBP20.53■□□□□ 0.88
LRRC28-210ENST00000558879 IRF5Q13568 498 aa20.53■□□□□ 0.88
LRRC28-210ENST00000558879 USP17L2Q6R6M4 530 aa20.53■□□□□ 0.88
LRRC28-210ENST00000558879 KBTBD3Q8NAB2 608 aa20.53■□□□□ 0.88
LRRC28-210ENST00000558879 SLAIN1Q8ND83 568 aa20.53■□□□□ 0.88
LRRC28-210ENST00000558879 KIAA1683Q9H0B3 1180 aa20.53■□□□□ 0.88
LRRC28-210ENST00000558879 CYP2D6P10635 497 aa20.52■□□□□ 0.88
LRRC28-210ENST00000558879 FLT3LGP49771 235 aa20.52■□□□□ 0.88
LRRC28-210ENST00000558879 HERVK_113P62684 666 aa20.52■□□□□ 0.88
LRRC28-210ENST00000558879 MTFR1Q15390 333 aa20.52■□□□□ 0.88
LRRC28-210ENST00000558879 TSHZ3Q63HK5 1081 aa20.52■□□□□ 0.88
LRRC28-210ENST00000558879 ZSCAN25Q6NSZ9 544 aa20.52■□□□□ 0.88
LRRC28-210ENST00000558879 GPATCH3Q96I76 525 aa20.52■□□□□ 0.88
LRRC28-210ENST00000558879 PUS7LQ9H0K6 701 aaKnown RBP20.52■□□□□ 0.88
LRRC28-210ENST00000558879 TTC41PQ6P2S7 1318 aa20.52■□□□□ 0.87
LRRC28-210ENST00000558879 RAB3GAP1Q15042 981 aa20.51■□□□□ 0.87
LRRC28-210ENST00000558879 SLC44A5Q8NCS7 719 aa20.51■□□□□ 0.87
LRRC28-210ENST00000558879 PXYLP1Q8TE99 480 aa20.51■□□□□ 0.87
LRRC28-210ENST00000558879 CRBNQ96SW2 442 aa20.51■□□□□ 0.87
LRRC28-210ENST00000558879 SWAP70Q9UH65 585 aa20.51■□□□□ 0.87
LRRC28-210ENST00000558879 SALL3Q9BXA9 1300 aa20.51■□□□□ 0.87
LRRC28-210ENST00000558879 PRPF38BQ5VTL8 546 aaKnown RBP20.5■□□□□ 0.87
LRRC28-210ENST00000558879 POTEEQ6S8J3 1075 aa20.5■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms