RNA–Protein interactions for RNA: ENST00000558709.1

SCG3-203, Transcript of secretogranin III, humanhuman

TSL 2

Gene SCG3, Length 896 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCG3-203ENST00000558709 HHIPL1Q96JK4 782 aa10.35□□□□□ -0.75
SCG3-203ENST00000558709 GLIS2Q9BZE0 524 aaPredicted RBP10.35□□□□□ -0.75
SCG3-203ENST00000558709 NOVA2Q9UNW9 492 aaKnown RBP10.35□□□□□ -0.75
SCG3-203ENST00000558709 USP16Q9Y5T5 823 aa10.35□□□□□ -0.75
SCG3-203ENST00000558709 RIC1Q4ADV7 1423 aa10.34□□□□□ -0.75
SCG3-203ENST00000558709 LRRC37AA6NMS7 1700 aa10.34□□□□□ -0.75
SCG3-203ENST00000558709 FAM181BA6NEQ2 426 aa10.34□□□□□ -0.75
SCG3-203ENST00000558709 GNAT3A8MTJ3 354 aa10.34□□□□□ -0.75
SCG3-203ENST00000558709 C2CD2LO14523 706 aa10.34□□□□□ -0.75
SCG3-203ENST00000558709 ATXN7O15265 892 aaPredicted RBP10.34□□□□□ -0.75
SCG3-203ENST00000558709 EFSO43281 561 aa10.34□□□□□ -0.75
SCG3-203ENST00000558709 FGFR3P22607 806 aa10.34□□□□□ -0.75
SCG3-203ENST00000558709 TNP2Q05952 138 aa10.34□□□□□ -0.75
SCG3-203ENST00000558709 CRY2Q49AN0 593 aa10.34□□□□□ -0.75
SCG3-203ENST00000558709 ACDQ96AP0 544 aa10.34□□□□□ -0.75
SCG3-203ENST00000558709 CCDC97Q96F63 343 aaPredicted RBP10.34□□□□□ -0.75
SCG3-203ENST00000558709 ZNF408Q9H9D4 720 aa10.34□□□□□ -0.75
SCG3-203ENST00000558709 GPRC5DQ9NZD1 345 aa10.34□□□□□ -0.75
SCG3-203ENST00000558709 CEMIPQ8WUJ3 1361 aa10.34□□□□□ -0.75
SCG3-203ENST00000558709 PSME4Q14997 1843 aa10.33□□□□□ -0.76
SCG3-203ENST00000558709 CELA2BP08218 269 aaPredicted RBP10.33□□□□□ -0.76
SCG3-203ENST00000558709 FAM200AQ8TCP9 573 aa10.33□□□□□ -0.76
SCG3-203ENST00000558709 PCGF6Q9BYE7 350 aa10.33□□□□□ -0.76
SCG3-203ENST00000558709 PHACTR1Q9C0D0 580 aa10.33□□□□□ -0.76
SCG3-203ENST00000558709 ADARB2Q9NS39 739 aaKnown RBP10.33□□□□□ -0.76
SCG3-203ENST00000558709 SCN9AQ15858 1988 aa10.33□□□□□ -0.76
SCG3-203ENST00000558709 MKI67P46013 3256 aaKnown RBP10.33□□□□□ -0.76
SCG3-203ENST00000558709 RBBP6Q7Z6E9 1792 aaKnown RBP10.32□□□□□ -0.76
SCG3-203ENST00000558709 BTBD11A6QL63 1104 aa10.32□□□□□ -0.76
SCG3-203ENST00000558709 DIAPH1O60610 1272 aaKnown RBP10.32□□□□□ -0.76
SCG3-203ENST00000558709 LGR5O75473 907 aa10.32□□□□□ -0.76
SCG3-203ENST00000558709 MAP2K3P46734 347 aa10.32□□□□□ -0.76
SCG3-203ENST00000558709 CTBSQ01459 385 aa10.32□□□□□ -0.76
SCG3-203ENST00000558709 NOGQ13253 232 aa10.32□□□□□ -0.76
SCG3-203ENST00000558709 HLFQ16534 295 aa10.32□□□□□ -0.76
SCG3-203ENST00000558709 AOC3Q16853 763 aa10.32□□□□□ -0.76
SCG3-203ENST00000558709 NIM1KQ8IY84 436 aa10.32□□□□□ -0.76
SCG3-203ENST00000558709 PBXIP1Q96AQ6 731 aa10.32□□□□□ -0.76
SCG3-203ENST00000558709 HINFPQ9BQA5 517 aa10.32□□□□□ -0.76
SCG3-203ENST00000558709 CHMP3Q9Y3E7 222 aa10.32□□□□□ -0.76
SCG3-203ENST00000558709 HCN4Q9Y3Q4 1203 aa10.32□□□□□ -0.76
SCG3-203ENST00000558709 KNSTRNQ9Y448 316 aa10.32□□□□□ -0.76
SCG3-203ENST00000558709 NPC1L1Q9UHC9 1359 aa10.31□□□□□ -0.76
SCG3-203ENST00000558709 TCERG1O14776 1098 aaKnown RBP10.31□□□□□ -0.76
SCG3-203ENST00000558709 PPIP5K2O43314 1243 aa10.31□□□□□ -0.76
SCG3-203ENST00000558709 MAPTP10636 758 aaKnown RBP10.31□□□□□ -0.76
SCG3-203ENST00000558709 CCDC82Q8N4S0 544 aa10.31□□□□□ -0.76
SCG3-203ENST00000558709 SVOPQ8N4V2 548 aa10.31□□□□□ -0.76
SCG3-203ENST00000558709 RHPN1Q8TCX5 695 aa10.31□□□□□ -0.76
SCG3-203ENST00000558709 STK32AQ8WU08 396 aa10.31□□□□□ -0.76
SCG3-203ENST00000558709 RPGRQ92834 1020 aaKnown RBP10.31□□□□□ -0.76
SCG3-203ENST00000558709 NSFL1CQ9UNZ2 370 aaKnown RBP10.31□□□□□ -0.76
SCG3-203ENST00000558709 KIAA0100Q14667 2235 aaKnown RBP10.3□□□□□ -0.76
SCG3-203ENST00000558709 GMPSP49915 693 aaPredicted RBP10.3□□□□□ -0.76
SCG3-203ENST00000558709 HUNKP57058 714 aa10.3□□□□□ -0.76
SCG3-203ENST00000558709 SWI5Q1ZZU3 235 aa10.3□□□□□ -0.76
SCG3-203ENST00000558709 ALDH16A1Q8IZ83 802 aa10.3□□□□□ -0.76
SCG3-203ENST00000558709 TRPM4Q8TD43 1214 aa10.3□□□□□ -0.76
SCG3-203ENST00000558709 DUOX1Q9NRD9 1551 aa10.3□□□□□ -0.76
SCG3-203ENST00000558709 CENPFP49454 3210 aa10.29□□□□□ -0.76
SCG3-203ENST00000558709 PAPPA2Q9BXP8 1791 aa10.29□□□□□ -0.76
SCG3-203ENST00000558709 DCDC2BA2VCK2 349 aa10.29□□□□□ -0.76
SCG3-203ENST00000558709 FAM155AB1AL88 458 aaPredicted RBP10.29□□□□□ -0.76
SCG3-203ENST00000558709 SNRPA1P09661 255 aaKnown RBP10.29□□□□□ -0.76
SCG3-203ENST00000558709 HSPA5P11021 654 aaKnown RBP10.29□□□□□ -0.76
SCG3-203ENST00000558709 HOXA10P31260 410 aaPredicted RBP10.29□□□□□ -0.76
SCG3-203ENST00000558709 CXCL9Q07325 125 aa10.29□□□□□ -0.76
SCG3-203ENST00000558709 LRRC69Q6ZNQ3 347 aa10.29□□□□□ -0.76
SCG3-203ENST00000558709 SAGE1Q9NXZ1 904 aa10.29□□□□□ -0.76
SCG3-203ENST00000558709 PGAP2Q9UHJ9 254 aa10.29□□□□□ -0.76
SCG3-203ENST00000558709 ADAMTS8Q9UP79 889 aa10.29□□□□□ -0.76
SCG3-203ENST00000558709 KIF7Q2M1P5 1343 aa10.29□□□□□ -0.76
SCG3-203ENST00000558709 IBTKQ9P2D0 1353 aaPredicted RBP10.28□□□□□ -0.76
SCG3-203ENST00000558709 SHTN1A0MZ66 631 aa10.28□□□□□ -0.76
SCG3-203ENST00000558709 U2SURPO15042 1029 aaKnown RBP10.28□□□□□ -0.76
SCG3-203ENST00000558709 LAMC2Q13753 1193 aa10.28□□□□□ -0.76
SCG3-203ENST00000558709 DLK2Q6UY11 383 aa10.28□□□□□ -0.76
SCG3-203ENST00000558709 OXCT2Q9BYC2 517 aaPredicted RBP10.28□□□□□ -0.76
SCG3-203ENST00000558709 NYXQ9GZU5 481 aa10.28□□□□□ -0.76
SCG3-203ENST00000558709 UBN2Q6ZU65 1347 aa10.28□□□□□ -0.76
SCG3-203ENST00000558709 CDHR2Q9BYE9 1310 aa10.28□□□□□ -0.76
SCG3-203ENST00000558709 BRCA2P51587 3418 aa10.27□□□□□ -0.77
SCG3-203ENST00000558709 KHNYNO15037 678 aaKnown RBP10.27□□□□□ -0.77
SCG3-203ENST00000558709 TRPA1O75762 1119 aa10.27□□□□□ -0.77
SCG3-203ENST00000558709 BCRP11274 1271 aa10.27□□□□□ -0.77
SCG3-203ENST00000558709 OCLNQ16625 522 aa10.27□□□□□ -0.77
SCG3-203ENST00000558709 TMEM164Q5U3C3 297 aa10.27□□□□□ -0.77
SCG3-203ENST00000558709 CDC37L1Q7L3B6 337 aa10.27□□□□□ -0.77
SCG3-203ENST00000558709 ZNF280CQ8ND82 737 aa10.27□□□□□ -0.77
SCG3-203ENST00000558709 RBM17Q96I25 401 aaKnown RBP10.27□□□□□ -0.77
SCG3-203ENST00000558709 HSH2DQ96JZ2 352 aa10.27□□□□□ -0.77
SCG3-203ENST00000558709 SUSD3Q96L08 255 aa10.27□□□□□ -0.77
SCG3-203ENST00000558709 CRAMP1Q96RY5 1269 aa10.27□□□□□ -0.77
SCG3-203ENST00000558709 BCL2L13Q9BXK5 485 aa10.27□□□□□ -0.77
SCG3-203ENST00000558709 ZNRF3Q9ULT6 936 aa10.27□□□□□ -0.77
SCG3-203ENST00000558709 LAMB1P07942 1786 aa10.26□□□□□ -0.77
SCG3-203ENST00000558709 CEP290O15078 2479 aa10.26□□□□□ -0.77
SCG3-203ENST00000558709 OIP5O43482 229 aa10.26□□□□□ -0.77
SCG3-203ENST00000558709 BMP4P12644 408 aa10.26□□□□□ -0.77
SCG3-203ENST00000558709 CD33P20138 364 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms