RNA–Protein interactions for RNA: ENST00000558406.5

MRPS11-204, Transcript of mitochondrial ribosomal protein S11, humanhuman

TSL 2

Gene MRPS11, Length 918 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS11-204ENST00000558406 ALPK3Q96L96 1907 aa15.35■□□□□ 0.05
MRPS11-204ENST00000558406 MTMR2Q13614 643 aa15.35■□□□□ 0.05
MRPS11-204ENST00000558406 RRP1BQ14684 758 aaKnown RBP15.35■□□□□ 0.05
MRPS11-204ENST00000558406 NAA16Q6N069 864 aaPredicted RBP15.35■□□□□ 0.05
MRPS11-204ENST00000558406 ATF7IPQ6VMQ6 1270 aa15.35■□□□□ 0.05
MRPS11-204ENST00000558406 CERS3Q8IU89 383 aa15.35■□□□□ 0.05
MRPS11-204ENST00000558406 GPRC5AQ8NFJ5 357 aa15.35■□□□□ 0.05
MRPS11-204ENST00000558406 ZNF512BQ96KM6 892 aaPredicted RBP15.35■□□□□ 0.05
MRPS11-204ENST00000558406 OGDHLQ9ULD0 1010 aa15.35■□□□□ 0.05
MRPS11-204ENST00000558406 TRIM27P14373 513 aa15.34■□□□□ 0.05
MRPS11-204ENST00000558406 MAPK4P31152 587 aa15.34■□□□□ 0.05
MRPS11-204ENST00000558406 MNX1P50219 401 aaPredicted RBP15.34■□□□□ 0.05
MRPS11-204ENST00000558406 CCDC158Q5M9N0 1113 aa15.34■□□□□ 0.05
MRPS11-204ENST00000558406 MAP3K21Q5TCX8 1036 aa15.34■□□□□ 0.05
MRPS11-204ENST00000558406 TMED8Q6PL24 325 aaPredicted RBP15.34■□□□□ 0.05
MRPS11-204ENST00000558406 DIS3LQ8TF46 1054 aaKnown RBP15.34■□□□□ 0.05
MRPS11-204ENST00000558406 LRCH3Q96II8 777 aa15.34■□□□□ 0.05
MRPS11-204ENST00000558406 GDF15Q99988 308 aa15.34■□□□□ 0.05
MRPS11-204ENST00000558406 TRIM34Q9BYJ4 488 aa15.34■□□□□ 0.05
MRPS11-204ENST00000558406 STAP2Q9UGK3 403 aa15.34■□□□□ 0.05
MRPS11-204ENST00000558406 FLT1P17948 1338 aa15.34■□□□□ 0.05
MRPS11-204ENST00000558406 PNMA6EA0A0J9YXQ4 647 aa15.33■□□□□ 0.04
MRPS11-204ENST00000558406 USP17L10C9JJH3 530 aa15.33■□□□□ 0.04
MRPS11-204ENST00000558406 HERVK_113P62684 666 aa15.33■□□□□ 0.04
MRPS11-204ENST00000558406 TRIB2Q92519 343 aa15.33■□□□□ 0.04
MRPS11-204ENST00000558406 NUDT12Q9BQG2 462 aa15.33■□□□□ 0.04
MRPS11-204ENST00000558406 C11orf49Q9H6J7 331 aa15.33■□□□□ 0.04
MRPS11-204ENST00000558406 AATFQ9NY61 560 aaKnown RBP eCLIP15.33■□□□□ 0.04
MRPS11-204ENST00000558406 SIPA1L1O43166 1804 aa15.32■□□□□ 0.04
MRPS11-204ENST00000558406 FOCADQ5VW36 1801 aa15.32■□□□□ 0.04
MRPS11-204ENST00000558406 HLA-DOAP06340 250 aa15.32■□□□□ 0.04
MRPS11-204ENST00000558406 PDE3AQ14432 1141 aa15.32■□□□□ 0.04
MRPS11-204ENST00000558406 TNNI3KQ59H18 835 aa15.32■□□□□ 0.04
MRPS11-204ENST00000558406 TTC39AQ5SRH9 613 aa15.32■□□□□ 0.04
MRPS11-204ENST00000558406 CRACR2BQ8N4Y2 399 aaPredicted RBP15.32■□□□□ 0.04
MRPS11-204ENST00000558406 TGFBRAP1Q8WUH2 860 aa15.32■□□□□ 0.04
MRPS11-204ENST00000558406 DNAJC18Q9H819 358 aa15.32■□□□□ 0.04
MRPS11-204ENST00000558406 ZBTB21Q9ULJ3 1066 aa15.32■□□□□ 0.04
MRPS11-204ENST00000558406 FPGT-TNNI3KV9GXZ4 949 aa15.32■□□□□ 0.04
MRPS11-204ENST00000558406 PLXNB2O15031 1838 aa15.31■□□□□ 0.04
MRPS11-204ENST00000558406 CCER2I3L3R5 266 aa15.31■□□□□ 0.04
MRPS11-204ENST00000558406 DLL1O00548 723 aa15.31■□□□□ 0.04
MRPS11-204ENST00000558406 PRKAR2AP13861 404 aaKnown RBP15.31■□□□□ 0.04
MRPS11-204ENST00000558406 C7orf61Q8IZ16 206 aa15.31■□□□□ 0.04
MRPS11-204ENST00000558406 SLC17A8Q8NDX2 589 aa15.31■□□□□ 0.04
MRPS11-204ENST00000558406 P2RX7Q99572 595 aaKnown RBP15.31■□□□□ 0.04
MRPS11-204ENST00000558406 CYP2E1P05181 493 aaPredicted RBP15.3■□□□□ 0.04
MRPS11-204ENST00000558406 ZKSCAN1P17029 563 aaPredicted RBP15.3■□□□□ 0.04
MRPS11-204ENST00000558406 RGS2P41220 211 aa15.3■□□□□ 0.04
MRPS11-204ENST00000558406 ERVK-9P63128 1117 aa15.3■□□□□ 0.04
MRPS11-204ENST00000558406 ERVK-24P63145 666 aa15.3■□□□□ 0.04
MRPS11-204ENST00000558406 TRIM32Q13049 653 aa15.3■□□□□ 0.04
MRPS11-204ENST00000558406 LRIT3Q3SXY7 679 aa15.3■□□□□ 0.04
MRPS11-204ENST00000558406 DDX60LQ5H9U9 1706 aaKnown RBP15.3■□□□□ 0.04
MRPS11-204ENST00000558406 MAPKAPK5Q8IW41 473 aa15.3■□□□□ 0.04
MRPS11-204ENST00000558406 CUL9Q8IWT3 2517 aa15.3■□□□□ 0.04
MRPS11-204ENST00000558406 SSH3Q8TE77 659 aa15.3■□□□□ 0.04
MRPS11-204ENST00000558406 USP6NLQ92738 828 aa15.3■□□□□ 0.04
MRPS11-204ENST00000558406 C12orf42Q96LP6 360 aa15.3■□□□□ 0.04
MRPS11-204ENST00000558406 TXNRD2Q9NNW7 524 aa15.3■□□□□ 0.04
MRPS11-204ENST00000558406 RBPJLQ9UBG7 517 aa15.3■□□□□ 0.04
MRPS11-204ENST00000558406 CYP2B6P20813 491 aa15.29■□□□□ 0.04
MRPS11-204ENST00000558406 JAG1P78504 1218 aa15.29■□□□□ 0.04
MRPS11-204ENST00000558406 MKRN4PQ13434 485 aaPredicted RBP15.29■□□□□ 0.04
MRPS11-204ENST00000558406 USP17L2Q6R6M4 530 aa15.29■□□□□ 0.04
MRPS11-204ENST00000558406 ADGRA1Q86SQ6 560 aa15.29■□□□□ 0.04
MRPS11-204ENST00000558406 CCAR1Q8IX12 1150 aaKnown RBP15.29■□□□□ 0.04
MRPS11-204ENST00000558406 APBA2Q99767 749 aa15.29■□□□□ 0.04
MRPS11-204ENST00000558406 DBNDD2Q9BQY9 259 aa15.29■□□□□ 0.04
MRPS11-204ENST00000558406 EHD4Q9H223 541 aa15.29■□□□□ 0.04
MRPS11-204ENST00000558406 SNRKQ9NRH2 765 aa15.29■□□□□ 0.04
MRPS11-204ENST00000558406 PALD1Q9ULE6 856 aa15.29■□□□□ 0.04
MRPS11-204ENST00000558406 GLRX3O76003 335 aaKnown RBP15.28■□□□□ 0.04
MRPS11-204ENST00000558406 COL6A1P12109 1028 aa15.28■□□□□ 0.04
MRPS11-204ENST00000558406 ATP8B2P98198 1209 aa15.28■□□□□ 0.04
MRPS11-204ENST00000558406 OS9Q13438 667 aaPredicted RBP15.28■□□□□ 0.04
MRPS11-204ENST00000558406 MORN1Q5T089 497 aa15.28■□□□□ 0.04
MRPS11-204ENST00000558406 TATDN1Q6P1N9 297 aa15.28■□□□□ 0.04
MRPS11-204ENST00000558406 GPR142Q7Z601 462 aa15.28■□□□□ 0.04
MRPS11-204ENST00000558406 PLEKHH3Q7Z736 793 aa15.28■□□□□ 0.04
MRPS11-204ENST00000558406 FRAT1Q92837 279 aaPredicted RBP15.28■□□□□ 0.04
MRPS11-204ENST00000558406 EMILIN3Q9NT22 766 aa15.28■□□□□ 0.04
MRPS11-204ENST00000558406 NOP58Q9Y2X3 529 aaKnown RBP15.28■□□□□ 0.04
MRPS11-204ENST00000558406 RABGAP1Q9Y3P9 1069 aa15.28■□□□□ 0.04
MRPS11-204ENST00000558406 CDK5RAP2Q96SN8 1893 aa15.27■□□□□ 0.04
MRPS11-204ENST00000558406 PFASO15067 1338 aa15.27■□□□□ 0.04
MRPS11-204ENST00000558406 GDF11O95390 407 aa15.27■□□□□ 0.04
MRPS11-204ENST00000558406 USP14P54578 494 aa15.27■□□□□ 0.04
MRPS11-204ENST00000558406 CCNA1P78396 465 aa15.27■□□□□ 0.04
MRPS11-204ENST00000558406 CACNB2Q08289 660 aaPredicted RBP15.27■□□□□ 0.04
MRPS11-204ENST00000558406 ZKSCAN2Q63HK3 967 aa15.27■□□□□ 0.04
MRPS11-204ENST00000558406 TDHQ8IZJ6 230 aa15.27■□□□□ 0.04
MRPS11-204ENST00000558406 USP17L15C9J2P7 530 aa15.26■□□□□ 0.03
MRPS11-204ENST00000558406 USP17L13C9JLJ4 530 aa15.26■□□□□ 0.03
MRPS11-204ENST00000558406 USP17L11C9JVI0 530 aa15.26■□□□□ 0.03
MRPS11-204ENST00000558406 USP17L18D6R9N7 530 aa15.26■□□□□ 0.03
MRPS11-204ENST00000558406 USP17L22D6RA61 530 aa15.26■□□□□ 0.03
MRPS11-204ENST00000558406 USP17L17D6RBQ6 530 aa15.26■□□□□ 0.03
MRPS11-204ENST00000558406 USP17L19D6RCP7 530 aa15.26■□□□□ 0.03
MRPS11-204ENST00000558406 USP17L20D6RJB6 530 aa15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms