RNA–Protein interactions for RNA: ENST00000558138.1

SPG11-207, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 5

Gene SPG11, Length 750 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-207ENST00000558138 SPP2Q13103 211 aa10.73□□□□□ -0.69
SPG11-207ENST00000558138 MCMDC2Q4G0Z9 681 aa10.73□□□□□ -0.69
SPG11-207ENST00000558138 TTC22Q5TAA0 569 aa10.73□□□□□ -0.69
SPG11-207ENST00000558138 FASTKD5Q7L8L6 764 aaKnown RBP10.73□□□□□ -0.69
SPG11-207ENST00000558138 ZNF280CQ8ND82 737 aa10.73□□□□□ -0.69
SPG11-207ENST00000558138 BRI3BPQ8WY22 251 aa10.73□□□□□ -0.69
SPG11-207ENST00000558138 DYNLL2Q96FJ2 89 aa10.73□□□□□ -0.69
SPG11-207ENST00000558138 OSBPL3Q9H4L5 887 aa10.73□□□□□ -0.69
SPG11-207ENST00000558138 DNAJC18Q9H819 358 aa10.73□□□□□ -0.69
SPG11-207ENST00000558138 MKNK2Q9HBH9 465 aa10.73□□□□□ -0.69
SPG11-207ENST00000558138 ZFYVE28Q9HCC9 887 aa10.73□□□□□ -0.69
SPG11-207ENST00000558138 PRDM10Q9NQV6 1147 aa10.73□□□□□ -0.69
SPG11-207ENST00000558138 HELLSQ9NRZ9 838 aa10.73□□□□□ -0.69
SPG11-207ENST00000558138 ZBTB21Q9ULJ3 1066 aa10.73□□□□□ -0.69
SPG11-207ENST00000558138 SIPA1L1O43166 1804 aa10.72□□□□□ -0.69
SPG11-207ENST00000558138 PATL2C9JE40 543 aaKnown RBP10.72□□□□□ -0.69
SPG11-207ENST00000558138 BTBD19C9JJ37 291 aa10.72□□□□□ -0.69
SPG11-207ENST00000558138 PDHXO00330 501 aa10.72□□□□□ -0.69
SPG11-207ENST00000558138 CXCL11O14625 94 aa10.72□□□□□ -0.69
SPG11-207ENST00000558138 RAD21O60216 631 aa10.72□□□□□ -0.69
SPG11-207ENST00000558138 SDSP20132 328 aa10.72□□□□□ -0.69
SPG11-207ENST00000558138 ATP2B2Q01814 1243 aa10.72□□□□□ -0.69
SPG11-207ENST00000558138 NMIQ13287 307 aaPredicted RBP10.72□□□□□ -0.69
SPG11-207ENST00000558138 ZYXQ15942 572 aaKnown RBP10.72□□□□□ -0.69
SPG11-207ENST00000558138 CTR9Q6PD62 1173 aa10.72□□□□□ -0.69
SPG11-207ENST00000558138 CWC27Q6UX04 472 aaKnown RBP10.72□□□□□ -0.69
SPG11-207ENST00000558138 FAM43AQ8N2R8 423 aa10.72□□□□□ -0.69
SPG11-207ENST00000558138 SLC44A5Q8NCS7 719 aa10.72□□□□□ -0.69
SPG11-207ENST00000558138 MS4A4AQ96JQ5 239 aa10.72□□□□□ -0.69
SPG11-207ENST00000558138 FAM227BQ96M60 508 aa10.72□□□□□ -0.69
SPG11-207ENST00000558138 ZNF287Q9HBT7 754 aa10.72□□□□□ -0.69
SPG11-207ENST00000558138 GINM1Q9NU53 330 aa10.72□□□□□ -0.69
SPG11-207ENST00000558138 AFG3L2Q9Y4W6 797 aa10.72□□□□□ -0.69
SPG11-207ENST00000558138 DDX60LQ5H9U9 1706 aaKnown RBP10.72□□□□□ -0.69
SPG11-207ENST00000558138 MYH8P13535 1937 aa10.72□□□□□ -0.69
SPG11-207ENST00000558138 A0A0D9SFI3 127 aa10.71□□□□□ -0.69
SPG11-207ENST00000558138 A0A0G2JLL6 359 aaPredicted RBP10.71□□□□□ -0.69
SPG11-207ENST00000558138 TESPA1A2RU30 521 aaPredicted RBP10.71□□□□□ -0.69
SPG11-207ENST00000558138 GSG1L2A8MUP6 293 aa10.71□□□□□ -0.69
SPG11-207ENST00000558138 ECM2O94769 699 aaPredicted RBP10.71□□□□□ -0.69
SPG11-207ENST00000558138 CDK8P49336 464 aa10.71□□□□□ -0.69
SPG11-207ENST00000558138 HMGCS2P54868 508 aa10.71□□□□□ -0.69
SPG11-207ENST00000558138 PABPC4Q13310 644 aaKnown RBP eCLIP10.71□□□□□ -0.69
SPG11-207ENST00000558138 CRHR2Q13324 411 aa10.71□□□□□ -0.69
SPG11-207ENST00000558138 MTMR2Q13614 643 aa10.71□□□□□ -0.69
SPG11-207ENST00000558138 RRP1BQ14684 758 aaKnown RBP10.71□□□□□ -0.69
SPG11-207ENST00000558138 COL13A1Q5TAT6 717 aaPredicted RBP10.71□□□□□ -0.69
SPG11-207ENST00000558138 C12orf60Q5U649 245 aa10.71□□□□□ -0.69
SPG11-207ENST00000558138 TATDN1Q6P1N9 297 aa10.71□□□□□ -0.69
SPG11-207ENST00000558138 GIMAP6Q6P9H5 292 aa10.71□□□□□ -0.69
SPG11-207ENST00000558138 PRRT2Q7Z6L0 340 aaPredicted RBP10.71□□□□□ -0.69
SPG11-207ENST00000558138 ANKRD23Q86SG2 305 aa10.71□□□□□ -0.69
SPG11-207ENST00000558138 IFNL3Q8IZI9 196 aa10.71□□□□□ -0.69
SPG11-207ENST00000558138 TNS4Q8IZW8 715 aa10.71□□□□□ -0.69
SPG11-207ENST00000558138 SMCR8Q8TEV9 937 aaPredicted RBP10.71□□□□□ -0.69
SPG11-207ENST00000558138 PARK7Q99497 189 aaKnown RBP10.71□□□□□ -0.69
SPG11-207ENST00000558138 PTPN18Q99952 460 aa10.71□□□□□ -0.69
SPG11-207ENST00000558138 TOMM22Q9NS69 142 aa10.71□□□□□ -0.69
SPG11-207ENST00000558138 PNMA3Q9UL41 463 aa10.71□□□□□ -0.69
SPG11-207ENST00000558138 KCNH4Q9UQ05 1017 aa10.71□□□□□ -0.69
SPG11-207ENST00000558138 LAMB1P07942 1786 aa10.7□□□□□ -0.7
SPG11-207ENST00000558138 CCDC171Q6TFL3 1326 aa10.7□□□□□ -0.7
SPG11-207ENST00000558138 USP17L10C9JJH3 530 aa10.7□□□□□ -0.7
SPG11-207ENST00000558138 GPR25O00155 361 aa10.7□□□□□ -0.7
SPG11-207ENST00000558138 FKTNO75072 461 aa10.7□□□□□ -0.7
SPG11-207ENST00000558138 OSBPP22059 807 aa10.7□□□□□ -0.7
SPG11-207ENST00000558138 SHMT1P34896 483 aa10.7□□□□□ -0.7
SPG11-207ENST00000558138 EVX2Q03828 476 aa10.7□□□□□ -0.7
SPG11-207ENST00000558138 PDE4BQ07343 736 aa10.7□□□□□ -0.7
SPG11-207ENST00000558138 KIF22Q14807 665 aa10.7□□□□□ -0.7
SPG11-207ENST00000558138 SHROOM1Q2M3G4 852 aaPredicted RBP10.7□□□□□ -0.7
SPG11-207ENST00000558138 METTL16Q86W50 562 aaKnown RBP10.7□□□□□ -0.7
SPG11-207ENST00000558138 ZNF444Q8N0Y2 327 aaPredicted RBP10.7□□□□□ -0.7
SPG11-207ENST00000558138 ZNF296Q8WUU4 475 aaPredicted RBP10.7□□□□□ -0.7
SPG11-207ENST00000558138 RUFY2Q8WXA3 655 aa10.7□□□□□ -0.7
SPG11-207ENST00000558138 ARHGEF10LQ9HCE6 1279 aa10.7□□□□□ -0.7
SPG11-207ENST00000558138 EPB41L4AQ9HCS5 686 aaPredicted RBP10.7□□□□□ -0.7
SPG11-207ENST00000558138 PCNTO95613 3336 aa10.69□□□□□ -0.7
SPG11-207ENST00000558138 CASP8AP2Q9UKL3 1982 aa10.69□□□□□ -0.7
SPG11-207ENST00000558138 GSPT1P15170 499 aaKnown RBP10.69□□□□□ -0.7
SPG11-207ENST00000558138 IRX3P78415 501 aaPredicted RBP10.69□□□□□ -0.7
SPG11-207ENST00000558138 ICA1Q05084 483 aa10.69□□□□□ -0.7
SPG11-207ENST00000558138 PPARAQ07869 468 aa10.69□□□□□ -0.7
SPG11-207ENST00000558138 DGKZQ13574 1117 aa10.69□□□□□ -0.7
SPG11-207ENST00000558138 SEPT2Q15019 361 aa10.69□□□□□ -0.7
SPG11-207ENST00000558138 SBK1Q52WX2 424 aa10.69□□□□□ -0.7
SPG11-207ENST00000558138 USP17L2Q6R6M4 530 aa10.69□□□□□ -0.7
SPG11-207ENST00000558138 TMEM179Q6ZVK1 233 aa10.69□□□□□ -0.7
SPG11-207ENST00000558138 C16orf86Q6ZW13 317 aa10.69□□□□□ -0.7
SPG11-207ENST00000558138 TICAM2Q86XR7 235 aa10.69□□□□□ -0.7
SPG11-207ENST00000558138 CCDC17Q96LX7 622 aa10.69□□□□□ -0.7
SPG11-207ENST00000558138 ZCCHC17Q9NP64 241 aaKnown RBP10.69□□□□□ -0.7
SPG11-207ENST00000558138 TAOK2Q9UL54 1235 aa10.69□□□□□ -0.7
SPG11-207ENST00000558138 AGTPBP1Q9UPW5 1226 aa10.69□□□□□ -0.7
SPG11-207ENST00000558138 C19orf81C9J6K1 198 aa10.68□□□□□ -0.7
SPG11-207ENST00000558138 PRDM1O75626 825 aa10.68□□□□□ -0.7
SPG11-207ENST00000558138 TSPY3P0CV98 308 aa10.68□□□□□ -0.7
SPG11-207ENST00000558138 TSPY8P0CW00 308 aa10.68□□□□□ -0.7
SPG11-207ENST00000558138 CYP2C8P10632 490 aa10.68□□□□□ -0.7
SPG11-207ENST00000558138 AKR1B1P15121 316 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms