RNA–Protein interactions for RNA: ENST00000556765.1

TRAPPC6B-206, Transcript of trafficking protein particle complex 6B, humanhuman

TSL 3

Gene TRAPPC6B, Length 664 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC6B-206ENST00000556765 PUS3Q9BZE2 481 aaKnown RBP17.04■□□□□ 0.32
TRAPPC6B-206ENST00000556765 C11orf49Q9H6J7 331 aa17.04■□□□□ 0.32
TRAPPC6B-206ENST00000556765 ANO2Q9NQ90 1003 aa17.04■□□□□ 0.32
TRAPPC6B-206ENST00000556765 TAOK2Q9UL54 1235 aa17.04■□□□□ 0.32
TRAPPC6B-206ENST00000556765 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.04■□□□□ 0.32
TRAPPC6B-206ENST00000556765 COL2A1P02458 1487 aaPredicted RBP17.04■□□□□ 0.32
TRAPPC6B-206ENST00000556765 ZNF697Q5TEC3 545 aa17.03■□□□□ 0.32
TRAPPC6B-206ENST00000556765 DCAF15Q66K64 600 aa17.03■□□□□ 0.32
TRAPPC6B-206ENST00000556765 KBTBD3Q8NAB2 608 aa17.03■□□□□ 0.32
TRAPPC6B-206ENST00000556765 IFIT1P09914 478 aaKnown RBP17.02■□□□□ 0.32
TRAPPC6B-206ENST00000556765 UQCRFS1P1P0C7P4 283 aa17.02■□□□□ 0.32
TRAPPC6B-206ENST00000556765 SLC5A1P13866 664 aa17.02■□□□□ 0.32
TRAPPC6B-206ENST00000556765 INPP5BP32019 993 aa17.02■□□□□ 0.32
TRAPPC6B-206ENST00000556765 TTC39AQ5SRH9 613 aa17.02■□□□□ 0.32
TRAPPC6B-206ENST00000556765 GPAT2Q6NUI2 795 aa17.02■□□□□ 0.32
TRAPPC6B-206ENST00000556765 CDX2Q99626 313 aaPredicted RBP17.02■□□□□ 0.32
TRAPPC6B-206ENST00000556765 ZNF341Q9BYN7 854 aa17.02■□□□□ 0.32
TRAPPC6B-206ENST00000556765 DDX60LQ5H9U9 1706 aaKnown RBP17.01■□□□□ 0.31
TRAPPC6B-206ENST00000556765 DNAH12Q6ZR08 3092 aa17.01■□□□□ 0.31
TRAPPC6B-206ENST00000556765 ST18O60284 1047 aa17.01■□□□□ 0.31
TRAPPC6B-206ENST00000556765 MAP4K4O95819 1239 aaPredicted RBP17.01■□□□□ 0.31
TRAPPC6B-206ENST00000556765 ZFYP08048 801 aaPredicted RBP17.01■□□□□ 0.31
TRAPPC6B-206ENST00000556765 MCM2P49736 904 aa17.01■□□□□ 0.31
TRAPPC6B-206ENST00000556765 MDM2Q00987 491 aaPredicted RBP17.01■□□□□ 0.31
TRAPPC6B-206ENST00000556765 TTF1Q15361 905 aaPredicted RBP17.01■□□□□ 0.31
TRAPPC6B-206ENST00000556765 XAGE2Q96GT9 111 aa17.01■□□□□ 0.31
TRAPPC6B-206ENST00000556765 PAG1Q9NWQ8 432 aa17.01■□□□□ 0.31
TRAPPC6B-206ENST00000556765 TIMM10P62072 90 aa17■□□□□ 0.31
TRAPPC6B-206ENST00000556765 MIGA2Q7L4E1 593 aa17■□□□□ 0.31
TRAPPC6B-206ENST00000556765 FAM83AQ86UY5 434 aa17■□□□□ 0.31
TRAPPC6B-206ENST00000556765 FAM122AQ96E09 287 aa17■□□□□ 0.31
TRAPPC6B-206ENST00000556765 KIF2CQ99661 725 aa17■□□□□ 0.31
TRAPPC6B-206ENST00000556765 TBC1D2Q9BYX2 928 aa17■□□□□ 0.31
TRAPPC6B-206ENST00000556765 TNFRSF10AO00220 468 aa16.99■□□□□ 0.31
TRAPPC6B-206ENST00000556765 ZBTB22O15209 634 aa16.99■□□□□ 0.31
TRAPPC6B-206ENST00000556765 FGFR2P21802 821 aa16.99■□□□□ 0.31
TRAPPC6B-206ENST00000556765 HSPA4P34932 840 aa16.99■□□□□ 0.31
TRAPPC6B-206ENST00000556765 ZSCAN25Q6NSZ9 544 aa16.99■□□□□ 0.31
TRAPPC6B-206ENST00000556765 CWC27Q6UX04 472 aaKnown RBP16.99■□□□□ 0.31
TRAPPC6B-206ENST00000556765 HELLSQ9NRZ9 838 aa16.99■□□□□ 0.31
TRAPPC6B-206ENST00000556765 TMOD2Q9NZR1 351 aa16.99■□□□□ 0.31
TRAPPC6B-206ENST00000556765 PFASO15067 1338 aa16.98■□□□□ 0.31
TRAPPC6B-206ENST00000556765 BDP1A6H8Y1 2624 aa16.98■□□□□ 0.31
TRAPPC6B-206ENST00000556765 HMGCRP04035 888 aa16.98■□□□□ 0.31
TRAPPC6B-206ENST00000556765 ARID4AP29374 1257 aaPredicted RBP16.98■□□□□ 0.31
TRAPPC6B-206ENST00000556765 TDRD7Q8NHU6 1098 aaKnown RBP16.98■□□□□ 0.31
TRAPPC6B-206ENST00000556765 COA7Q96BR5 231 aa16.98■□□□□ 0.31
TRAPPC6B-206ENST00000556765 DNAJC2Q99543 621 aaKnown RBP16.98■□□□□ 0.31
TRAPPC6B-206ENST00000556765 LSG1Q9H089 658 aaKnown RBP16.98■□□□□ 0.31
TRAPPC6B-206ENST00000556765 RPAP1Q9BWH6 1393 aaPredicted RBP16.98■□□□□ 0.31
TRAPPC6B-206ENST00000556765 CCDC171Q6TFL3 1326 aa16.97■□□□□ 0.31
TRAPPC6B-206ENST00000556765 CXCL11O14625 94 aa16.97■□□□□ 0.31
TRAPPC6B-206ENST00000556765 UBE4AQ14139 1066 aa16.97■□□□□ 0.31
TRAPPC6B-206ENST00000556765 RNF20Q5VTR2 975 aa16.97■□□□□ 0.31
TRAPPC6B-206ENST00000556765 FKBP1CQ5VVH2 108 aa16.97■□□□□ 0.31
TRAPPC6B-206ENST00000556765 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.97■□□□□ 0.31
TRAPPC6B-206ENST00000556765 HMX1Q9NP08 348 aaPredicted RBP16.97■□□□□ 0.31
TRAPPC6B-206ENST00000556765 OGDHLQ9ULD0 1010 aa16.97■□□□□ 0.31
TRAPPC6B-206ENST00000556765 DOCK2Q92608 1830 aa16.97■□□□□ 0.31
TRAPPC6B-206ENST00000556765 IGSF3O75054 1194 aa16.96■□□□□ 0.31
TRAPPC6B-206ENST00000556765 NMIQ13287 307 aaPredicted RBP16.96■□□□□ 0.31
TRAPPC6B-206ENST00000556765 GRIK5Q16478 980 aa16.96■□□□□ 0.31
TRAPPC6B-206ENST00000556765 MYLIPQ8WY64 445 aa16.96■□□□□ 0.31
TRAPPC6B-206ENST00000556765 TEKT1Q969V4 418 aa16.96■□□□□ 0.31
TRAPPC6B-206ENST00000556765 HMG20BQ9P0W2 317 aa16.96■□□□□ 0.31
TRAPPC6B-206ENST00000556765 ZNF112Q9UJU3 913 aa16.96■□□□□ 0.31
TRAPPC6B-206ENST00000556765 K7ELQ4 463 aaPredicted RBP16.95■□□□□ 0.3
TRAPPC6B-206ENST00000556765 ZKSCAN1P17029 563 aaPredicted RBP16.95■□□□□ 0.3
TRAPPC6B-206ENST00000556765 HDLBPQ00341 1268 aaKnown RBP16.95■□□□□ 0.3
TRAPPC6B-206ENST00000556765 MCMDC2Q4G0Z9 681 aa16.95■□□□□ 0.3
TRAPPC6B-206ENST00000556765 NOL9Q5SY16 702 aaKnown RBP16.95■□□□□ 0.3
TRAPPC6B-206ENST00000556765 FASTKD5Q7L8L6 764 aaKnown RBP16.95■□□□□ 0.3
TRAPPC6B-206ENST00000556765 SMCR8Q8TEV9 937 aaPredicted RBP16.95■□□□□ 0.3
TRAPPC6B-206ENST00000556765 KCNB2Q92953 911 aa16.95■□□□□ 0.3
TRAPPC6B-206ENST00000556765 SEMA6BQ9H3T3 888 aa16.95■□□□□ 0.3
TRAPPC6B-206ENST00000556765 DOCK3Q8IZD9 2030 aa16.95■□□□□ 0.3
TRAPPC6B-206ENST00000556765 NCOR1O75376 2440 aa16.95■□□□□ 0.3
TRAPPC6B-206ENST00000556765 TMEM265A0A087WTH1 108 aa16.94■□□□□ 0.3
TRAPPC6B-206ENST00000556765 GOLIM4O00461 696 aa16.94■□□□□ 0.3
TRAPPC6B-206ENST00000556765 HOXD11P31277 338 aaPredicted RBP16.94■□□□□ 0.3
TRAPPC6B-206ENST00000556765 HIBADHP31937 336 aaKnown RBP16.94■□□□□ 0.3
TRAPPC6B-206ENST00000556765 GYG1P46976 350 aa16.94■□□□□ 0.3
TRAPPC6B-206ENST00000556765 TRIM32Q13049 653 aa16.94■□□□□ 0.3
TRAPPC6B-206ENST00000556765 TJAP1Q5JTD0 557 aa16.94■□□□□ 0.3
TRAPPC6B-206ENST00000556765 TMED8Q6PL24 325 aaPredicted RBP16.94■□□□□ 0.3
TRAPPC6B-206ENST00000556765 TM6SF1Q9BZW5 370 aa16.94■□□□□ 0.3
TRAPPC6B-206ENST00000556765 GNL3LQ9NVN8 582 aaKnown RBP16.94■□□□□ 0.3
TRAPPC6B-206ENST00000556765 A0A0G2JLL6 359 aaPredicted RBP16.93■□□□□ 0.3
TRAPPC6B-206ENST00000556765 RNF113AO15541 343 aaKnown RBP16.93■□□□□ 0.3
TRAPPC6B-206ENST00000556765 COL6A1P12109 1028 aa16.93■□□□□ 0.3
TRAPPC6B-206ENST00000556765 FOSL2P15408 326 aa16.93■□□□□ 0.3
TRAPPC6B-206ENST00000556765 LRRC26Q2I0M4 334 aa16.93■□□□□ 0.3
TRAPPC6B-206ENST00000556765 CCDC102BQ68D86 513 aa16.93■□□□□ 0.3
TRAPPC6B-206ENST00000556765 GADL1Q6ZQY3 521 aa16.93■□□□□ 0.3
TRAPPC6B-206ENST00000556765 PRRT2Q7Z6L0 340 aaPredicted RBP16.93■□□□□ 0.3
TRAPPC6B-206ENST00000556765 MAP4K1Q92918 833 aa16.93■□□□□ 0.3
TRAPPC6B-206ENST00000556765 ZDHHC15Q96MV8 337 aa16.93■□□□□ 0.3
TRAPPC6B-206ENST00000556765 LBHD1Q9BQE6 289 aaPredicted RBP16.93■□□□□ 0.3
TRAPPC6B-206ENST00000556765 SLC45A1Q9Y2W3 748 aa16.93■□□□□ 0.3
TRAPPC6B-206ENST00000556765 MYH13Q9UKX3 1938 aa16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms