RNA–Protein interactions for RNA: ENST00000556564.5

PTPN21-208, Transcript of protein tyrosine phosphatase, non-receptor type 21, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPN21, Length 6,166 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN21-208ENST00000556564 AKR1B10O60218 316 aa19.55■□□□□ 0.72
PTPN21-208ENST00000556564 FGAP02671 866 aa19.55■□□□□ 0.72
PTPN21-208ENST00000556564 SMTNP53814 917 aa19.55■□□□□ 0.72
PTPN21-208ENST00000556564 LRSAM1Q6UWE0 723 aa19.55■□□□□ 0.72
PTPN21-208ENST00000556564 CTNND2Q9UQB3 1225 aa19.55■□□□□ 0.72
PTPN21-208ENST00000556564 ZNF853P0CG23 659 aa19.54■□□□□ 0.72
PTPN21-208ENST00000556564 PABPC4Q13310 644 aaKnown RBP eCLIP19.54■□□□□ 0.72
PTPN21-208ENST00000556564 LMTK2Q8IWU2 1503 aa19.54■□□□□ 0.72
PTPN21-208ENST00000556564 ANTXR1Q9H6X2 564 aa19.54■□□□□ 0.72
PTPN21-208ENST00000556564 DIP2BQ9P265 1576 aa19.54■□□□□ 0.72
PTPN21-208ENST00000556564 STRN3Q13033 797 aa19.54■□□□□ 0.72
PTPN21-208ENST00000556564 PNMA1Q8ND90 353 aa19.54■□□□□ 0.72
PTPN21-208ENST00000556564 SLC5A4Q9NY91 659 aa19.54■□□□□ 0.72
PTPN21-208ENST00000556564 TMEM232C9JQI7 657 aa19.54■□□□□ 0.72
PTPN21-208ENST00000556564 PTGS1P23219 599 aa19.54■□□□□ 0.72
PTPN21-208ENST00000556564 TAF12Q16514 161 aa19.54■□□□□ 0.72
PTPN21-208ENST00000556564 MIGA2Q7L4E1 593 aa19.54■□□□□ 0.72
PTPN21-208ENST00000556564 APBB1IPQ7Z5R6 666 aaPredicted RBP19.54■□□□□ 0.72
PTPN21-208ENST00000556564 SNX29Q8TEQ0 813 aa19.54■□□□□ 0.72
PTPN21-208ENST00000556564 TNKSO95271 1327 aa19.54■□□□□ 0.72
PTPN21-208ENST00000556564 HSPA4P34932 840 aa19.53■□□□□ 0.72
PTPN21-208ENST00000556564 RBM10P98175 930 aaKnown RBP19.53■□□□□ 0.72
PTPN21-208ENST00000556564 KRT40Q6A162 431 aa19.53■□□□□ 0.72
PTPN21-208ENST00000556564 TAOK3Q9H2K8 898 aa19.53■□□□□ 0.72
PTPN21-208ENST00000556564 CYP19A1P11511 503 aaPredicted RBP19.53■□□□□ 0.72
PTPN21-208ENST00000556564 GJC1P36383 396 aa19.53■□□□□ 0.72
PTPN21-208ENST00000556564 CLEC4GQ6UXB4 293 aa19.53■□□□□ 0.72
PTPN21-208ENST00000556564 GSTTP1A0A1W2PQM5 241 aa19.53■□□□□ 0.72
PTPN21-208ENST00000556564 TMEM110-MUSTN1A8MSY1 372 aa19.53■□□□□ 0.72
PTPN21-208ENST00000556564 PDE4DQ08499 809 aa19.53■□□□□ 0.72
PTPN21-208ENST00000556564 RAD51AP2Q09MP3 1159 aa19.53■□□□□ 0.72
PTPN21-208ENST00000556564 VPS72Q15906 364 aa19.53■□□□□ 0.72
PTPN21-208ENST00000556564 ELP1O95163 1332 aa19.53■□□□□ 0.72
PTPN21-208ENST00000556564 SLFN13Q68D06 897 aa19.53■□□□□ 0.72
PTPN21-208ENST00000556564 BSDC1Q9NW68 430 aaPredicted RBP19.53■□□□□ 0.72
PTPN21-208ENST00000556564 FRMD4BQ9Y2L6 1034 aa19.53■□□□□ 0.72
PTPN21-208ENST00000556564 UBXN1Q04323 297 aa19.53■□□□□ 0.72
PTPN21-208ENST00000556564 REXO1Q8N1G1 1221 aaKnown RBP19.53■□□□□ 0.72
PTPN21-208ENST00000556564 SYNE4Q8N205 404 aa19.53■□□□□ 0.72
PTPN21-208ENST00000556564 ANKRD35Q8N283 1001 aa19.53■□□□□ 0.72
PTPN21-208ENST00000556564 ABT1Q9ULW3 272 aaKnown RBP19.53■□□□□ 0.72
PTPN21-208ENST00000556564 PAFAH1B1P43034 410 aa19.52■□□□□ 0.72
PTPN21-208ENST00000556564 FAM47CQ5HY64 1035 aa19.52■□□□□ 0.72
PTPN21-208ENST00000556564 CCDC97Q96F63 343 aaPredicted RBP19.52■□□□□ 0.72
PTPN21-208ENST00000556564 TRIM6Q9C030 488 aaPredicted RBP19.52■□□□□ 0.72
PTPN21-208ENST00000556564 TBC1D7Q9P0N9 293 aa19.52■□□□□ 0.72
PTPN21-208ENST00000556564 FAM173BQ6P4H8 233 aa19.52■□□□□ 0.72
PTPN21-208ENST00000556564 TTLL11Q8NHH1 800 aa19.52■□□□□ 0.72
PTPN21-208ENST00000556564 GPKOWQ92917 476 aaPredicted RBP eCLIP19.52■□□□□ 0.72
PTPN21-208ENST00000556564 FNBP1Q96RU3 617 aa19.52■□□□□ 0.72
PTPN21-208ENST00000556564 LRWD1Q9UFC0 647 aa19.52■□□□□ 0.72
PTPN21-208ENST00000556564 BIRC3Q13489 604 aa19.52■□□□□ 0.71
PTPN21-208ENST00000556564 DHX37Q8IY37 1157 aaKnown RBP19.52■□□□□ 0.71
PTPN21-208ENST00000556564 MLXIPQ9HAP2 919 aa19.52■□□□□ 0.71
PTPN21-208ENST00000556564 PTCH1Q13635 1447 aa19.51■□□□□ 0.71
PTPN21-208ENST00000556564 SPAG1Q07617 926 aa19.51■□□□□ 0.71
PTPN21-208ENST00000556564 UBE3CQ15386 1083 aa19.51■□□□□ 0.71
PTPN21-208ENST00000556564 ARMC9Q7Z3E5 817 aa19.51■□□□□ 0.71
PTPN21-208ENST00000556564 PPP2R5BQ15173 497 aa19.51■□□□□ 0.71
PTPN21-208ENST00000556564 CARMIL3Q8ND23 1372 aa19.51■□□□□ 0.71
PTPN21-208ENST00000556564 AOC3Q16853 763 aa19.51■□□□□ 0.71
PTPN21-208ENST00000556564 PSTPIP2Q9H939 334 aa19.51■□□□□ 0.71
PTPN21-208ENST00000556564 MED23Q9ULK4 1368 aa19.51■□□□□ 0.71
PTPN21-208ENST00000556564 DKC1O60832 514 aaKnown RBP eCLIP19.51■□□□□ 0.71
PTPN21-208ENST00000556564 DIXDC1Q155Q3 683 aa19.51■□□□□ 0.71
PTPN21-208ENST00000556564 SUPT20HL1Q3ZLR7 823 aa19.51■□□□□ 0.71
PTPN21-208ENST00000556564 GPR108Q9NPR9 543 aa19.51■□□□□ 0.71
PTPN21-208ENST00000556564 NLRX1Q86UT6 975 aa19.51■□□□□ 0.71
PTPN21-208ENST00000556564 GLG1Q92896 1179 aa19.51■□□□□ 0.71
PTPN21-208ENST00000556564 KLRF2D3W0D1 207 aa19.5■□□□□ 0.71
PTPN21-208ENST00000556564 FBXO11Q86XK2 927 aa19.5■□□□□ 0.71
PTPN21-208ENST00000556564 CCPG1Q9ULG6 757 aa19.5■□□□□ 0.71
PTPN21-208ENST00000556564 MAPK8IP1Q9UQF2 711 aa19.5■□□□□ 0.71
PTPN21-208ENST00000556564 KIDINS220Q9ULH0 1771 aa19.5■□□□□ 0.71
PTPN21-208ENST00000556564 GCOM1H8Y6P7 765 aaPredicted RBP19.5■□□□□ 0.71
PTPN21-208ENST00000556564 CAVIN2O95810 425 aa19.5■□□□□ 0.71
PTPN21-208ENST00000556564 POLR2MP0CAP2 368 aa19.5■□□□□ 0.71
PTPN21-208ENST00000556564 CC2D2BQ6DHV5 1058 aa19.5■□□□□ 0.71
PTPN21-208ENST00000556564 DYMQ7RTS9 669 aa19.5■□□□□ 0.71
PTPN21-208ENST00000556564 UBXN4Q92575 508 aa19.5■□□□□ 0.71
PTPN21-208ENST00000556564 JADE2Q9NQC1 790 aa19.5■□□□□ 0.71
PTPN21-208ENST00000556564 POLR2DO15514 142 aaKnown RBP19.5■□□□□ 0.71
PTPN21-208ENST00000556564 TPH2Q8IWU9 490 aa19.5■□□□□ 0.71
PTPN21-208ENST00000556564 CCDC113Q9H0I3 377 aa19.5■□□□□ 0.71
PTPN21-208ENST00000556564 SETBP1Q9Y6X0 1596 aa19.5■□□□□ 0.71
PTPN21-208ENST00000556564 ZC3H13Q5T200 1668 aaKnown RBP19.5■□□□□ 0.71
PTPN21-208ENST00000556564 M0QZ92 97 aa19.5■□□□□ 0.71
PTPN21-208ENST00000556564 TRAF5O00463 557 aa19.5■□□□□ 0.71
PTPN21-208ENST00000556564 PRKAB2O43741 272 aa19.5■□□□□ 0.71
PTPN21-208ENST00000556564 PTPN12Q05209 780 aaKnown RBP19.5■□□□□ 0.71
PTPN21-208ENST00000556564 TYRO3Q06418 890 aa19.5■□□□□ 0.71
PTPN21-208ENST00000556564 MRPL11Q9Y3B7 192 aaKnown RBP19.5■□□□□ 0.71
PTPN21-208ENST00000556564 CEP170BQ9Y4F5 1589 aaPredicted RBP19.5■□□□□ 0.71
PTPN21-208ENST00000556564 NEK11Q8NG66 645 aa19.5■□□□□ 0.71
PTPN21-208ENST00000556564 C16orf45Q96MC5 204 aaPredicted RBP19.5■□□□□ 0.71
PTPN21-208ENST00000556564 UQCRHLA0A096LP55 91 aa19.49■□□□□ 0.71
PTPN21-208ENST00000556564 UQCRHP07919 91 aa19.49■□□□□ 0.71
PTPN21-208ENST00000556564 LCORLQ8N3X6 602 aa19.49■□□□□ 0.71
PTPN21-208ENST00000556564 DIP2AQ14689 1571 aa19.49■□□□□ 0.71
PTPN21-208ENST00000556564 EPB41P11171 864 aaKnown RBP19.49■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms