RNA–Protein interactions for RNA: ENST00000556432.1

ACTN1-219, Transcript of actinin alpha 1, humanhuman

TSL 1 (best)

Gene ACTN1, Length 558 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-219ENST00000556432 LAMA2P24043 3122 aaKnown RBP17.21■□□□□ 0.34
ACTN1-219ENST00000556432 CNGA1P29973 690 aa17.2■□□□□ 0.34
ACTN1-219ENST00000556432 HOXA7P31268 230 aaPredicted RBP17.2■□□□□ 0.34
ACTN1-219ENST00000556432 WDR78Q5VTH9 848 aa17.2■□□□□ 0.34
ACTN1-219ENST00000556432 MFSD14CQ5VZR4 134 aa17.2■□□□□ 0.34
ACTN1-219ENST00000556432 TBC1D9Q6ZT07 1266 aa17.2■□□□□ 0.34
ACTN1-219ENST00000556432 CRACR2BQ8N4Y2 399 aaPredicted RBP17.2■□□□□ 0.34
ACTN1-219ENST00000556432 MAFAQ8NHW3 353 aaPredicted RBP17.2■□□□□ 0.34
ACTN1-219ENST00000556432 ZNF384Q8TF68 577 aa17.2■□□□□ 0.34
ACTN1-219ENST00000556432 NEUROD6Q96NK8 337 aa17.2■□□□□ 0.34
ACTN1-219ENST00000556432 PI4KBQ9UBF8 816 aa17.2■□□□□ 0.34
ACTN1-219ENST00000556432 HDAC5Q9UQL6 1122 aa17.2■□□□□ 0.34
ACTN1-219ENST00000556432 AKAP2Q9Y2D5 859 aa17.2■□□□□ 0.34
ACTN1-219ENST00000556432 C19orf81C9J6K1 198 aa17.19■□□□□ 0.34
ACTN1-219ENST00000556432 ZBTB22O15209 634 aa17.19■□□□□ 0.34
ACTN1-219ENST00000556432 ANP32CO43423 234 aa17.19■□□□□ 0.34
ACTN1-219ENST00000556432 PI16Q6UXB8 463 aa17.19■□□□□ 0.34
ACTN1-219ENST00000556432 SH3RF3Q8TEJ3 882 aaPredicted RBP17.19■□□□□ 0.34
ACTN1-219ENST00000556432 GTF3C2Q8WUA4 911 aaPredicted RBP17.19■□□□□ 0.34
ACTN1-219ENST00000556432 NSUN4Q96CB9 384 aaKnown RBP17.19■□□□□ 0.34
ACTN1-219ENST00000556432 SMC4Q9NTJ3 1288 aa17.19■□□□□ 0.34
ACTN1-219ENST00000556432 RBPJLQ9UBG7 517 aa17.19■□□□□ 0.34
ACTN1-219ENST00000556432 USP17L10C9JJH3 530 aa17.18■□□□□ 0.34
ACTN1-219ENST00000556432 GDF11O95390 407 aa17.18■□□□□ 0.34
ACTN1-219ENST00000556432 TFCP2Q12800 502 aa17.18■□□□□ 0.34
ACTN1-219ENST00000556432 Q3C1V9 767 aa17.18■□□□□ 0.34
ACTN1-219ENST00000556432 MORN1Q5T089 497 aa17.18■□□□□ 0.34
ACTN1-219ENST00000556432 SPATA5Q8NB90 893 aa17.18■□□□□ 0.34
ACTN1-219ENST00000556432 USP6NLQ92738 828 aa17.18■□□□□ 0.34
ACTN1-219ENST00000556432 DHX36Q9H2U1 1008 aaKnown RBP17.18■□□□□ 0.34
ACTN1-219ENST00000556432 COPRSQ9NQ92 184 aa17.18■□□□□ 0.34
ACTN1-219ENST00000556432 HMG20BQ9P0W2 317 aa17.18■□□□□ 0.34
ACTN1-219ENST00000556432 LRP2BPQ9P2M1 347 aa17.18■□□□□ 0.34
ACTN1-219ENST00000556432 NDUFB9Q9Y6M9 179 aa17.18■□□□□ 0.34
ACTN1-219ENST00000556432 GLRX3O76003 335 aaKnown RBP17.17■□□□□ 0.34
ACTN1-219ENST00000556432 VCANP13611 3396 aa17.17■□□□□ 0.34
ACTN1-219ENST00000556432 MAP2K5Q13163 448 aa17.17■□□□□ 0.34
ACTN1-219ENST00000556432 CDX2Q99626 313 aaPredicted RBP17.17■□□□□ 0.34
ACTN1-219ENST00000556432 ATP11BQ9Y2G3 1177 aa17.17■□□□□ 0.34
ACTN1-219ENST00000556432 DNAH12Q6ZR08 3092 aa17.16■□□□□ 0.34
ACTN1-219ENST00000556432 RTP1P59025 263 aa17.16■□□□□ 0.34
ACTN1-219ENST00000556432 CCNA1P78396 465 aa17.16■□□□□ 0.34
ACTN1-219ENST00000556432 SHROOM1Q2M3G4 852 aaPredicted RBP17.16■□□□□ 0.34
ACTN1-219ENST00000556432 MAPKAPK5Q8IW41 473 aa17.16■□□□□ 0.34
ACTN1-219ENST00000556432 EDC3Q96F86 508 aaKnown RBP17.16■□□□□ 0.34
ACTN1-219ENST00000556432 FEZ1Q99689 392 aa17.16■□□□□ 0.34
ACTN1-219ENST00000556432 PRDM5Q9NQX1 630 aaPredicted RBP17.16■□□□□ 0.34
ACTN1-219ENST00000556432 AATFQ9NY61 560 aaKnown RBP eCLIP17.16■□□□□ 0.34
ACTN1-219ENST00000556432 DDX20Q9UHI6 824 aaKnown RBP17.16■□□□□ 0.34
ACTN1-219ENST00000556432 BAG3O95817 575 aa17.15■□□□□ 0.34
ACTN1-219ENST00000556432 PLCG2P16885 1265 aa17.15■□□□□ 0.34
ACTN1-219ENST00000556432 JAG1P78504 1218 aa17.15■□□□□ 0.34
ACTN1-219ENST00000556432 ATP2B2Q01814 1243 aa17.15■□□□□ 0.34
ACTN1-219ENST00000556432 ZYXQ15942 572 aaKnown RBP17.15■□□□□ 0.34
ACTN1-219ENST00000556432 TGFBRAP1Q8WUH2 860 aa17.15■□□□□ 0.34
ACTN1-219ENST00000556432 ZBTB21Q9ULJ3 1066 aa17.15■□□□□ 0.34
ACTN1-219ENST00000556432 IVNS1ABPQ9Y6Y0 642 aa17.15■□□□□ 0.34
ACTN1-219ENST00000556432 MAST2Q6P0Q8 1798 aa17.15■□□□□ 0.34
ACTN1-219ENST00000556432 E9PSI1 815 aa17.14■□□□□ 0.33
ACTN1-219ENST00000556432 DNM1LO00429 736 aa17.14■□□□□ 0.33
ACTN1-219ENST00000556432 SRGAP3O43295 1099 aa17.14■□□□□ 0.33
ACTN1-219ENST00000556432 MSCO60682 206 aa17.14■□□□□ 0.33
ACTN1-219ENST00000556432 MYCNP04198 464 aaPredicted RBP17.14■□□□□ 0.33
ACTN1-219ENST00000556432 SHHQ15465 462 aa17.14■□□□□ 0.33
ACTN1-219ENST00000556432 NAA16Q6N069 864 aaPredicted RBP17.14■□□□□ 0.33
ACTN1-219ENST00000556432 USP17L2Q6R6M4 530 aa17.14■□□□□ 0.33
ACTN1-219ENST00000556432 MYLIPQ8WY64 445 aa17.14■□□□□ 0.33
ACTN1-219ENST00000556432 LPAR1Q92633 364 aa17.14■□□□□ 0.33
ACTN1-219ENST00000556432 PRDM6Q9NQX0 595 aa17.14■□□□□ 0.33
ACTN1-219ENST00000556432 FLRT1Q9NZU1 646 aa17.14■□□□□ 0.33
ACTN1-219ENST00000556432 SAP30BPQ9UHR5 308 aaKnown RBP17.14■□□□□ 0.33
ACTN1-219ENST00000556432 EYSQ5T1H1 3165 aa17.14■□□□□ 0.33
ACTN1-219ENST00000556432 TTC28Q96AY4 2481 aa17.13■□□□□ 0.33
ACTN1-219ENST00000556432 FRMPD3Q5JV73 1810 aa17.13■□□□□ 0.33
ACTN1-219ENST00000556432 ALDH1L2Q3SY69 923 aa17.13■□□□□ 0.33
ACTN1-219ENST00000556432 MEIS3Q99687 375 aa17.13■□□□□ 0.33
ACTN1-219ENST00000556432 SEMA6BQ9H3T3 888 aa17.13■□□□□ 0.33
ACTN1-219ENST00000556432 DNAJC18Q9H819 358 aa17.13■□□□□ 0.33
ACTN1-219ENST00000556432 EMILIN3Q9NT22 766 aa17.13■□□□□ 0.33
ACTN1-219ENST00000556432 GINM1Q9NU53 330 aa17.13■□□□□ 0.33
ACTN1-219ENST00000556432 PALD1Q9ULE6 856 aa17.13■□□□□ 0.33
ACTN1-219ENST00000556432 RABGAP1Q9Y3P9 1069 aa17.13■□□□□ 0.33
ACTN1-219ENST00000556432 FLT1P17948 1338 aa17.13■□□□□ 0.33
ACTN1-219ENST00000556432 ZNF521Q96K83 1311 aa17.13■□□□□ 0.33
ACTN1-219ENST00000556432 SLC15A5A6NIM6 579 aa17.12■□□□□ 0.33
ACTN1-219ENST00000556432 KBTBD13C9JR72 458 aa17.12■□□□□ 0.33
ACTN1-219ENST00000556432 HLA-DOAP06340 250 aa17.12■□□□□ 0.33
ACTN1-219ENST00000556432 FOSL2P15408 326 aa17.12■□□□□ 0.33
ACTN1-219ENST00000556432 CYP2C19P33261 490 aa17.12■□□□□ 0.33
ACTN1-219ENST00000556432 C9orf50Q5SZB4 431 aa17.12■□□□□ 0.33
ACTN1-219ENST00000556432 GJC2Q5T442 439 aaPredicted RBP17.12■□□□□ 0.33
ACTN1-219ENST00000556432 FOXP4Q8IVH2 680 aaPredicted RBP17.12■□□□□ 0.33
ACTN1-219ENST00000556432 USP17L15C9J2P7 530 aa17.11■□□□□ 0.33
ACTN1-219ENST00000556432 USP17L13C9JLJ4 530 aa17.11■□□□□ 0.33
ACTN1-219ENST00000556432 USP17L11C9JVI0 530 aa17.11■□□□□ 0.33
ACTN1-219ENST00000556432 USP17L18D6R9N7 530 aa17.11■□□□□ 0.33
ACTN1-219ENST00000556432 USP17L22D6RA61 530 aa17.11■□□□□ 0.33
ACTN1-219ENST00000556432 USP17L17D6RBQ6 530 aa17.11■□□□□ 0.33
ACTN1-219ENST00000556432 USP17L19D6RCP7 530 aa17.11■□□□□ 0.33
ACTN1-219ENST00000556432 USP17L20D6RJB6 530 aa17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 98 ms