RNA–Protein interactions for RNA: ENST00000556162.5

SNX6-206, Transcript of sorting nexin 6, humanhuman

TSL 2

Gene SNX6, Length 1,855 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-206ENST00000556162 REC8O95072 547 aa16.8■□□□□ 0.28
SNX6-206ENST00000556162 ABCB5Q2M3G0 1257 aa16.8■□□□□ 0.28
SNX6-206ENST00000556162 ERO1BQ86YB8 467 aa16.8■□□□□ 0.28
SNX6-206ENST00000556162 MPHOSPH10O00566 681 aaKnown RBP16.8■□□□□ 0.28
SNX6-206ENST00000556162 PRDM1O75626 825 aa16.8■□□□□ 0.28
SNX6-206ENST00000556162 RASAL3Q86YV0 1011 aa16.8■□□□□ 0.28
SNX6-206ENST00000556162 OPTNQ96CV9 577 aa16.8■□□□□ 0.28
SNX6-206ENST00000556162 CAPNS2Q96L46 248 aa16.8■□□□□ 0.28
SNX6-206ENST00000556162 RNF41Q9H4P4 317 aaPredicted RBP16.8■□□□□ 0.28
SNX6-206ENST00000556162 RBM8AQ9Y5S9 174 aaKnown RBP16.8■□□□□ 0.28
SNX6-206ENST00000556162 SPDYE5A6NIY4 337 aa16.79■□□□□ 0.28
SNX6-206ENST00000556162 GH2P01242 217 aa16.79■□□□□ 0.28
SNX6-206ENST00000556162 SLC10A3P09131 477 aa16.79■□□□□ 0.28
SNX6-206ENST00000556162 PTPRAP18433 802 aa16.79■□□□□ 0.28
SNX6-206ENST00000556162 PPATQ06203 517 aa16.79■□□□□ 0.28
SNX6-206ENST00000556162 MFSD6Q6ZSS7 791 aa16.79■□□□□ 0.28
SNX6-206ENST00000556162 ZBTB21Q9ULJ3 1066 aa16.79■□□□□ 0.28
SNX6-206ENST00000556162 CEP350Q5VT06 3117 aa16.79■□□□□ 0.28
SNX6-206ENST00000556162 PCP11498 1178 aaKnown RBP16.78■□□□□ 0.28
SNX6-206ENST00000556162 RASA1P20936 1047 aa16.78■□□□□ 0.28
SNX6-206ENST00000556162 VEGFBP49765 207 aa16.78■□□□□ 0.28
SNX6-206ENST00000556162 JAG1P78504 1218 aa16.78■□□□□ 0.28
SNX6-206ENST00000556162 AKNAD1Q5T1N1 836 aa16.78■□□□□ 0.28
SNX6-206ENST00000556162 SPRYD7Q5W111 196 aa16.78■□□□□ 0.28
SNX6-206ENST00000556162 CNKSR2Q8WXI2 1034 aa16.78■□□□□ 0.28
SNX6-206ENST00000556162 OTUD5Q96G74 571 aa16.78■□□□□ 0.28
SNX6-206ENST00000556162 WNK4Q96J92 1243 aa16.78■□□□□ 0.28
SNX6-206ENST00000556162 INCENPQ9NQS7 918 aa16.78■□□□□ 0.28
SNX6-206ENST00000556162 TOMM22Q9NS69 142 aa16.78■□□□□ 0.28
SNX6-206ENST00000556162 ZHX2Q9Y6X8 837 aa16.78■□□□□ 0.28
SNX6-206ENST00000556162 USP17L5A8MUK1 530 aa16.78■□□□□ 0.28
SNX6-206ENST00000556162 FAM155AB1AL88 458 aaPredicted RBP16.78■□□□□ 0.28
SNX6-206ENST00000556162 EIF5BO60841 1220 aaKnown RBP16.78■□□□□ 0.28
SNX6-206ENST00000556162 FGRP09769 529 aa16.78■□□□□ 0.28
SNX6-206ENST00000556162 ZBTB48P10074 688 aaPredicted RBP16.78■□□□□ 0.28
SNX6-206ENST00000556162 AKR1B1P15121 316 aa16.78■□□□□ 0.28
SNX6-206ENST00000556162 MKRN3Q13064 507 aaKnown RBP16.78■□□□□ 0.28
SNX6-206ENST00000556162 RAB3GAP1Q15042 981 aa16.78■□□□□ 0.28
SNX6-206ENST00000556162 TMEM179Q6ZVK1 233 aa16.78■□□□□ 0.28
SNX6-206ENST00000556162 STAG1Q8WVM7 1258 aa16.78■□□□□ 0.28
SNX6-206ENST00000556162 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.78■□□□□ 0.28
SNX6-206ENST00000556162 WDR33Q9C0J8 1336 aaKnown RBP16.77■□□□□ 0.28
SNX6-206ENST00000556162 CYP21A2P08686 494 aa16.77■□□□□ 0.27
SNX6-206ENST00000556162 NOGQ13253 232 aa16.77■□□□□ 0.27
SNX6-206ENST00000556162 PPIL2Q13356 520 aa16.77■□□□□ 0.27
SNX6-206ENST00000556162 SHROOM1Q2M3G4 852 aaPredicted RBP16.77■□□□□ 0.27
SNX6-206ENST00000556162 TBC1D10CQ8IV04 446 aa16.77■□□□□ 0.27
SNX6-206ENST00000556162 TBC1D2Q9BYX2 928 aa16.77■□□□□ 0.27
SNX6-206ENST00000556162 NBPF3Q9H094 633 aa16.77■□□□□ 0.27
SNX6-206ENST00000556162 AS3MTQ9HBK9 375 aa16.77■□□□□ 0.27
SNX6-206ENST00000556162 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.77■□□□□ 0.27
SNX6-206ENST00000556162 ORC4O43929 436 aa16.76■□□□□ 0.27
SNX6-206ENST00000556162 RANBP6O60518 1105 aaKnown RBP16.76■□□□□ 0.27
SNX6-206ENST00000556162 RRP12Q5JTH9 1297 aaKnown RBP16.76■□□□□ 0.27
SNX6-206ENST00000556162 OTOFQ9HC10 1997 aa16.76■□□□□ 0.27
SNX6-206ENST00000556162 LAMB1P07942 1786 aa16.76■□□□□ 0.27
SNX6-206ENST00000556162 IRF6O14896 467 aa16.76■□□□□ 0.27
SNX6-206ENST00000556162 TSPY3P0CV98 308 aa16.76■□□□□ 0.27
SNX6-206ENST00000556162 TSPY8P0CW00 308 aa16.76■□□□□ 0.27
SNX6-206ENST00000556162 GJA5P36382 358 aa16.76■□□□□ 0.27
SNX6-206ENST00000556162 TFAP4Q01664 338 aa16.76■□□□□ 0.27
SNX6-206ENST00000556162 SEPT2Q15019 361 aa16.76■□□□□ 0.27
SNX6-206ENST00000556162 NECTIN1Q15223 517 aa16.76■□□□□ 0.27
SNX6-206ENST00000556162 RNF20Q5VTR2 975 aa16.76■□□□□ 0.27
SNX6-206ENST00000556162 CCDC84Q86UT8 332 aaPredicted RBP16.76■□□□□ 0.27
SNX6-206ENST00000556162 TACC3Q9Y6A5 838 aa16.76■□□□□ 0.27
SNX6-206ENST00000556162 TSPY2A6NKD2 308 aa16.75■□□□□ 0.27
SNX6-206ENST00000556162 FAM47AQ5JRC9 791 aa16.75■□□□□ 0.27
SNX6-206ENST00000556162 CREB3L3Q68CJ9 461 aa16.75■□□□□ 0.27
SNX6-206ENST00000556162 DNAJC5GQ8N7S2 189 aa16.75■□□□□ 0.27
SNX6-206ENST00000556162 ZNF280CQ8ND82 737 aa16.75■□□□□ 0.27
SNX6-206ENST00000556162 AFG3L2Q9Y4W6 797 aa16.75■□□□□ 0.27
SNX6-206ENST00000556162 SLC27A2O14975 620 aa16.74■□□□□ 0.27
SNX6-206ENST00000556162 EPB41L2O43491 1005 aaKnown RBP16.74■□□□□ 0.27
SNX6-206ENST00000556162 AOC2O75106 756 aa16.74■□□□□ 0.27
SNX6-206ENST00000556162 GUCY1A2P33402 732 aa16.74■□□□□ 0.27
SNX6-206ENST00000556162 MAP2K2P36507 400 aa16.74■□□□□ 0.27
SNX6-206ENST00000556162 NT5C2P49902 561 aa16.74■□□□□ 0.27
SNX6-206ENST00000556162 TRDNQ13061 729 aa16.74■□□□□ 0.27
SNX6-206ENST00000556162 SPP2Q13103 211 aa16.74■□□□□ 0.27
SNX6-206ENST00000556162 ESR2Q92731 530 aa16.74■□□□□ 0.27
SNX6-206ENST00000556162 WDR18Q9BV38 432 aa16.74■□□□□ 0.27
SNX6-206ENST00000556162 CNNM2Q9H8M5 875 aa16.74■□□□□ 0.27
SNX6-206ENST00000556162 KANSL2Q9H9L4 492 aa16.74■□□□□ 0.27
SNX6-206ENST00000556162 TRIM75PA6NK02 468 aa16.73■□□□□ 0.27
SNX6-206ENST00000556162 CXCL11O14625 94 aa16.73■□□□□ 0.27
SNX6-206ENST00000556162 GTF2A2P52657 109 aa16.73■□□□□ 0.27
SNX6-206ENST00000556162 KIF23Q02241 960 aaPredicted RBP16.73■□□□□ 0.27
SNX6-206ENST00000556162 SNAPC2Q13487 334 aa16.73■□□□□ 0.27
SNX6-206ENST00000556162 NEDD1Q8NHV4 660 aa16.73■□□□□ 0.27
SNX6-206ENST00000556162 KRT23Q9C075 422 aa16.73■□□□□ 0.27
SNX6-206ENST00000556162 KCNH4Q9UQ05 1017 aa16.73■□□□□ 0.27
SNX6-206ENST00000556162 DOCK1Q14185 1865 aa16.73■□□□□ 0.27
SNX6-206ENST00000556162 MANSC4A6NHS7 340 aaPredicted RBP16.73■□□□□ 0.27
SNX6-206ENST00000556162 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.73■□□□□ 0.27
SNX6-206ENST00000556162 NEDD4P46934 1319 aa16.72■□□□□ 0.27
SNX6-206ENST00000556162 PCNTO95613 3336 aa16.72■□□□□ 0.27
SNX6-206ENST00000556162 E7EWF7 191 aa16.72■□□□□ 0.27
SNX6-206ENST00000556162 ZKSCAN1P17029 563 aaPredicted RBP16.72■□□□□ 0.27
SNX6-206ENST00000556162 INHBEP58166 350 aa16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 78.9 ms