RNA–Protein interactions for RNA: ENST00000551912.1

DDX54-209, Transcript of DEAD-box helicase 54, humanhuman

TSL 2

Gene DDX54, Length 458 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-209ENST00000551912 CDK8P49336 464 aa22.24■■□□□ 1.15
DDX54-209ENST00000551912 PPARAQ07869 468 aa22.24■■□□□ 1.15
DDX54-209ENST00000551912 CASC1Q6TDU7 716 aa22.24■■□□□ 1.15
DDX54-209ENST00000551912 ZIC5Q96T25 663 aa22.24■■□□□ 1.15
DDX54-209ENST00000551912 DSCC1Q9BVC3 393 aa22.24■■□□□ 1.15
DDX54-209ENST00000551912 LAMB1P07942 1786 aa22.23■■□□□ 1.15
DDX54-209ENST00000551912 SLC3A2P08195 630 aaKnown RBP22.23■■□□□ 1.15
DDX54-209ENST00000551912 KIF23Q02241 960 aaPredicted RBP22.23■■□□□ 1.15
DDX54-209ENST00000551912 PPIL2Q13356 520 aa22.23■■□□□ 1.15
DDX54-209ENST00000551912 THSD7BQ9C0I4 1608 aa22.23■■□□□ 1.15
DDX54-209ENST00000551912 ABCB5Q2M3G0 1257 aa22.22■■□□□ 1.15
DDX54-209ENST00000551912 STK11IPQ8N1F8 1099 aa22.22■■□□□ 1.15
DDX54-209ENST00000551912 JMYQ8N9B5 988 aa22.22■■□□□ 1.15
DDX54-209ENST00000551912 ZNF287Q9HBT7 754 aa22.22■■□□□ 1.15
DDX54-209ENST00000551912 ZBTB21Q9ULJ3 1066 aa22.22■■□□□ 1.15
DDX54-209ENST00000551912 ZHX2Q9Y6X8 837 aa22.22■■□□□ 1.15
DDX54-209ENST00000551912 ATAD5Q96QE3 1844 aa22.22■■□□□ 1.15
DDX54-209ENST00000551912 MANSC4A6NHS7 340 aaPredicted RBP22.21■■□□□ 1.15
DDX54-209ENST00000551912 IRF6O14896 467 aa22.21■■□□□ 1.15
DDX54-209ENST00000551912 GH2P01242 217 aa22.21■■□□□ 1.15
DDX54-209ENST00000551912 JAG1P78504 1218 aa22.21■■□□□ 1.15
DDX54-209ENST00000551912 REM2Q8IYK8 340 aaPredicted RBP22.21■■□□□ 1.15
DDX54-209ENST00000551912 ESYT1Q9BSJ8 1104 aa22.21■■□□□ 1.15
DDX54-209ENST00000551912 MKNK2Q9HBH9 465 aa22.21■■□□□ 1.15
DDX54-209ENST00000551912 CABP5Q9NP86 173 aa22.21■■□□□ 1.15
DDX54-209ENST00000551912 FRMD4AQ9P2Q2 1039 aaPredicted RBP22.21■■□□□ 1.15
DDX54-209ENST00000551912 ANAPC4Q9UJX5 808 aa22.21■■□□□ 1.15
DDX54-209ENST00000551912 USP17L5A8MUK1 530 aa22.2■■□□□ 1.14
DDX54-209ENST00000551912 GTF2A2P52657 109 aa22.2■■□□□ 1.14
DDX54-209ENST00000551912 PDE4BQ07343 736 aa22.2■■□□□ 1.14
DDX54-209ENST00000551912 SREBF2Q12772 1141 aa22.2■■□□□ 1.14
DDX54-209ENST00000551912 SHROOM1Q2M3G4 852 aaPredicted RBP22.2■■□□□ 1.14
DDX54-209ENST00000551912 CCDC17Q96LX7 622 aa22.2■■□□□ 1.14
DDX54-209ENST00000551912 TBC1D2Q9BYX2 928 aa22.2■■□□□ 1.14
DDX54-209ENST00000551912 GTF3C3Q9Y5Q9 886 aa22.2■■□□□ 1.14
DDX54-209ENST00000551912 MYH8P13535 1937 aa22.19■■□□□ 1.14
DDX54-209ENST00000551912 MPHOSPH10O00566 681 aaKnown RBP22.19■■□□□ 1.14
DDX54-209ENST00000551912 MAP2K1Q02750 393 aaPredicted RBP22.19■■□□□ 1.14
DDX54-209ENST00000551912 CTDSPL2Q05D32 466 aa22.19■■□□□ 1.14
DDX54-209ENST00000551912 SNAPC2Q13487 334 aa22.19■■□□□ 1.14
DDX54-209ENST00000551912 KIAA1211Q6ZU35 1233 aa22.19■■□□□ 1.14
DDX54-209ENST00000551912 CCDC84Q86UT8 332 aaPredicted RBP22.19■■□□□ 1.14
DDX54-209ENST00000551912 AS3MTQ9HBK9 375 aa22.19■■□□□ 1.14
DDX54-209ENST00000551912 CTNNA3Q9UI47 895 aa22.19■■□□□ 1.14
DDX54-209ENST00000551912 KCNH4Q9UQ05 1017 aa22.19■■□□□ 1.14
DDX54-209ENST00000551912 AFG3L2Q9Y4W6 797 aa22.19■■□□□ 1.14
DDX54-209ENST00000551912 INHBEP58166 350 aa22.18■■□□□ 1.14
DDX54-209ENST00000551912 RAB3GAP1Q15042 981 aa22.18■■□□□ 1.14
DDX54-209ENST00000551912 MS4A4AQ96JQ5 239 aa22.18■■□□□ 1.14
DDX54-209ENST00000551912 CXCL11O14625 94 aa22.17■■□□□ 1.14
DDX54-209ENST00000551912 ZNF213O14771 459 aa22.17■■□□□ 1.14
DDX54-209ENST00000551912 PRDM1O75626 825 aa22.17■■□□□ 1.14
DDX54-209ENST00000551912 AKR1B1P15121 316 aa22.17■■□□□ 1.14
DDX54-209ENST00000551912 RASA1P20936 1047 aa22.17■■□□□ 1.14
DDX54-209ENST00000551912 TM4SF4P48230 202 aa22.17■■□□□ 1.14
DDX54-209ENST00000551912 HAND2P61296 217 aa22.17■■□□□ 1.14
DDX54-209ENST00000551912 PTH1RQ03431 593 aa22.17■■□□□ 1.14
DDX54-209ENST00000551912 TMEM179Q6ZVK1 233 aa22.17■■□□□ 1.14
DDX54-209ENST00000551912 ZNF444Q8N0Y2 327 aaPredicted RBP22.17■■□□□ 1.14
DDX54-209ENST00000551912 ZNF280CQ8ND82 737 aa22.17■■□□□ 1.14
DDX54-209ENST00000551912 PHIPQ8WWQ0 1821 aa22.16■■□□□ 1.14
DDX54-209ENST00000551912 CCL15-CCL14A0A0B4J2E2 113 aa22.16■■□□□ 1.14
DDX54-209ENST00000551912 TESPA1A2RU30 521 aaPredicted RBP22.16■■□□□ 1.14
DDX54-209ENST00000551912 TRIM75PA6NK02 468 aa22.16■■□□□ 1.14
DDX54-209ENST00000551912 CETPP11597 493 aa22.16■■□□□ 1.14
DDX54-209ENST00000551912 SPP2Q13103 211 aa22.16■■□□□ 1.14
DDX54-209ENST00000551912 CCL15Q16663 113 aa22.16■■□□□ 1.14
DDX54-209ENST00000551912 IMMTQ16891 758 aaKnown RBP22.16■■□□□ 1.14
DDX54-209ENST00000551912 WDR18Q9BV38 432 aa22.16■■□□□ 1.14
DDX54-209ENST00000551912 GUCY1A2P33402 732 aa22.15■■□□□ 1.14
DDX54-209ENST00000551912 SEPT2Q15019 361 aa22.15■■□□□ 1.14
DDX54-209ENST00000551912 BEGAINQ9BUH8 593 aa22.15■■□□□ 1.14
DDX54-209ENST00000551912 DDX52Q9Y2R4 599 aaKnown RBP eCLIP22.15■■□□□ 1.14
DDX54-209ENST00000551912 U3KPZ7 1027 aaPredicted RBP22.15■■□□□ 1.14
DDX54-209ENST00000551912 PCP11498 1178 aaKnown RBP22.14■■□□□ 1.13
DDX54-209ENST00000551912 BRI3BPQ8WY22 251 aa22.14■■□□□ 1.13
DDX54-209ENST00000551912 MAP4K1Q92918 833 aa22.14■■□□□ 1.13
DDX54-209ENST00000551912 LSG1Q9H089 658 aaKnown RBP22.14■■□□□ 1.13
DDX54-209ENST00000551912 ANO2Q9NQ90 1003 aa22.14■■□□□ 1.13
DDX54-209ENST00000551912 WBP1LQ9NX94 342 aa22.14■■□□□ 1.13
DDX54-209ENST00000551912 A0A0G2JLL6 359 aaPredicted RBP22.13■■□□□ 1.13
DDX54-209ENST00000551912 FGRP09769 529 aa22.13■■□□□ 1.13
DDX54-209ENST00000551912 AKNAD1Q5T1N1 836 aa22.13■■□□□ 1.13
DDX54-209ENST00000551912 MFSD6Q6ZSS7 791 aa22.13■■□□□ 1.13
DDX54-209ENST00000551912 PRRT2Q7Z6L0 340 aaPredicted RBP22.13■■□□□ 1.13
DDX54-209ENST00000551912 IFNL1Q8IU54 200 aa22.13■■□□□ 1.13
DDX54-209ENST00000551912 STAG1Q8WVM7 1258 aa22.13■■□□□ 1.13
DDX54-209ENST00000551912 NBPF3Q9H094 633 aa22.13■■□□□ 1.13
DDX54-209ENST00000551912 RNF41Q9H4P4 317 aaPredicted RBP22.13■■□□□ 1.13
DDX54-209ENST00000551912 INCENPQ9NQS7 918 aa22.13■■□□□ 1.13
DDX54-209ENST00000551912 LAMA4Q16363 1823 aa22.13■■□□□ 1.13
DDX54-209ENST00000551912 USP17L10C9JJH3 530 aa22.12■■□□□ 1.13
DDX54-209ENST00000551912 ORC4O43929 436 aa22.12■■□□□ 1.13
DDX54-209ENST00000551912 TSPY3P0CV98 308 aa22.12■■□□□ 1.13
DDX54-209ENST00000551912 TSPY8P0CW00 308 aa22.12■■□□□ 1.13
DDX54-209ENST00000551912 OTUD7BQ6GQQ9 843 aa22.12■■□□□ 1.13
DDX54-209ENST00000551912 FASTKD5Q7L8L6 764 aaKnown RBP22.12■■□□□ 1.13
DDX54-209ENST00000551912 TBC1D10CQ8IV04 446 aa22.12■■□□□ 1.13
DDX54-209ENST00000551912 KANSL2Q9H9L4 492 aa22.12■■□□□ 1.13
DDX54-209ENST00000551912 TOMM22Q9NS69 142 aa22.12■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms