RNA–Protein interactions for RNA: ENST00000551706.1

CDK4-208, Transcript of cyclin dependent kinase 4, humanhuman

TSL 1 (best)

Gene CDK4, Length 984 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK4-208ENST00000551706 TAOK2Q9UL54 1235 aa20.79■□□□□ 0.92
CDK4-208ENST00000551706 OTOFQ9HC10 1997 aa20.78■□□□□ 0.92
CDK4-208ENST00000551706 GPAA1O43292 621 aa20.78■□□□□ 0.92
CDK4-208ENST00000551706 PPATQ06203 517 aa20.78■□□□□ 0.92
CDK4-208ENST00000551706 GIMAP6Q6P9H5 292 aa20.78■□□□□ 0.92
CDK4-208ENST00000551706 CDK5RAP2Q96SN8 1893 aa20.77■□□□□ 0.92
CDK4-208ENST00000551706 FAM196BA6NMK8 535 aa20.77■□□□□ 0.92
CDK4-208ENST00000551706 PRKAB2O43741 272 aa20.77■□□□□ 0.92
CDK4-208ENST00000551706 GJA5P36382 358 aa20.77■□□□□ 0.92
CDK4-208ENST00000551706 PPIL2Q13356 520 aa20.77■□□□□ 0.92
CDK4-208ENST00000551706 SLC4A8Q2Y0W8 1093 aa20.77■□□□□ 0.92
CDK4-208ENST00000551706 SLC9C1Q4G0N8 1177 aa20.77■□□□□ 0.92
CDK4-208ENST00000551706 CHRDL2Q6WN34 429 aa20.77■□□□□ 0.92
CDK4-208ENST00000551706 M0R2C6 588 aa20.76■□□□□ 0.91
CDK4-208ENST00000551706 SLURP2P0DP57 97 aa20.76■□□□□ 0.91
CDK4-208ENST00000551706 GTF2A2P52657 109 aa20.76■□□□□ 0.91
CDK4-208ENST00000551706 CAP1Q01518 475 aa20.76■□□□□ 0.91
CDK4-208ENST00000551706 HELLSQ9NRZ9 838 aa20.76■□□□□ 0.91
CDK4-208ENST00000551706 GINM1Q9NU53 330 aa20.76■□□□□ 0.91
CDK4-208ENST00000551706 HIP1O00291 1037 aa20.75■□□□□ 0.91
CDK4-208ENST00000551706 CAP2P40123 477 aa20.75■□□□□ 0.91
CDK4-208ENST00000551706 PLCD1P51178 756 aa20.75■□□□□ 0.91
CDK4-208ENST00000551706 TTC22Q5TAA0 569 aa20.75■□□□□ 0.91
CDK4-208ENST00000551706 CNKSR2Q8WXI2 1034 aa20.75■□□□□ 0.91
CDK4-208ENST00000551706 SEC62Q99442 399 aaKnown RBP20.75■□□□□ 0.91
CDK4-208ENST00000551706 DNAJC18Q9H819 358 aa20.75■□□□□ 0.91
CDK4-208ENST00000551706 RANBP2P49792 3224 aaKnown RBP20.75■□□□□ 0.91
CDK4-208ENST00000551706 TESPA1A2RU30 521 aaPredicted RBP20.74■□□□□ 0.91
CDK4-208ENST00000551706 PTPRAP18433 802 aa20.74■□□□□ 0.91
CDK4-208ENST00000551706 SNAPC2Q13487 334 aa20.74■□□□□ 0.91
CDK4-208ENST00000551706 ARHGEF6Q15052 776 aa20.74■□□□□ 0.91
CDK4-208ENST00000551706 TBC1D2Q9BYX2 928 aa20.74■□□□□ 0.91
CDK4-208ENST00000551706 NACAP1Q9BZK3 213 aa20.74■□□□□ 0.91
CDK4-208ENST00000551706 RBM27Q9P2N5 1060 aaKnown RBP20.74■□□□□ 0.91
CDK4-208ENST00000551706 ARPP21Q9UBL0 812 aaPredicted RBP20.74■□□□□ 0.91
CDK4-208ENST00000551706 PTCH2Q9Y6C5 1203 aa20.74■□□□□ 0.91
CDK4-208ENST00000551706 NAV1Q8NEY1 1877 aa20.73■□□□□ 0.91
CDK4-208ENST00000551706 DDX60LQ5H9U9 1706 aaKnown RBP20.73■□□□□ 0.91
CDK4-208ENST00000551706 GSG1L2A8MUP6 293 aa20.73■□□□□ 0.91
CDK4-208ENST00000551706 PATL2C9JE40 543 aaKnown RBP20.73■□□□□ 0.91
CDK4-208ENST00000551706 USP17L12C9JPN9 530 aa20.73■□□□□ 0.91
CDK4-208ENST00000551706 USP17L21D6R901 530 aa20.73■□□□□ 0.91
CDK4-208ENST00000551706 IRF6O14896 467 aa20.73■□□□□ 0.91
CDK4-208ENST00000551706 APPP05067 770 aa20.73■□□□□ 0.91
CDK4-208ENST00000551706 ASNSP08243 561 aa20.73■□□□□ 0.91
CDK4-208ENST00000551706 SDSP20132 328 aa20.73■□□□□ 0.91
CDK4-208ENST00000551706 C12orf60Q5U649 245 aa20.73■□□□□ 0.91
CDK4-208ENST00000551706 TATDN1Q6P1N9 297 aa20.73■□□□□ 0.91
CDK4-208ENST00000551706 MS4A4AQ96JQ5 239 aa20.73■□□□□ 0.91
CDK4-208ENST00000551706 PTPN18Q99952 460 aa20.73■□□□□ 0.91
CDK4-208ENST00000551706 SWAP70Q9UH65 585 aa20.73■□□□□ 0.91
CDK4-208ENST00000551706 ZHX2Q9Y6X8 837 aa20.73■□□□□ 0.91
CDK4-208ENST00000551706 MYH1P12882 1939 aa20.72■□□□□ 0.91
CDK4-208ENST00000551706 A0A0C4DFX4 3053 aa20.72■□□□□ 0.91
CDK4-208ENST00000551706 CETPP11597 493 aa20.72■□□□□ 0.91
CDK4-208ENST00000551706 GABPAQ06546 454 aa20.72■□□□□ 0.91
CDK4-208ENST00000551706 MCMDC2Q4G0Z9 681 aa20.72■□□□□ 0.91
CDK4-208ENST00000551706 SBK1Q52WX2 424 aa20.72■□□□□ 0.91
CDK4-208ENST00000551706 KCNH4Q9UQ05 1017 aa20.72■□□□□ 0.91
CDK4-208ENST00000551706 CXCL11O14625 94 aa20.71■□□□□ 0.91
CDK4-208ENST00000551706 MYCP01106 439 aaPredicted RBP20.71■□□□□ 0.91
CDK4-208ENST00000551706 GSPT1P15170 499 aaKnown RBP20.71■□□□□ 0.91
CDK4-208ENST00000551706 TDO2P48775 406 aa20.71■□□□□ 0.91
CDK4-208ENST00000551706 MFAP1P55081 439 aaKnown RBP20.71■□□□□ 0.91
CDK4-208ENST00000551706 CTR9Q6PD62 1173 aa20.71■□□□□ 0.91
CDK4-208ENST00000551706 FAM227BQ96M60 508 aa20.71■□□□□ 0.91
CDK4-208ENST00000551706 DIAPH3Q9NSV4 1193 aa20.71■□□□□ 0.91
CDK4-208ENST00000551706 SIPA1L1O43166 1804 aa20.71■□□□□ 0.91
CDK4-208ENST00000551706 CCL15-CCL14A0A0B4J2E2 113 aa20.7■□□□□ 0.9
CDK4-208ENST00000551706 A0A0D9SFI3 127 aa20.7■□□□□ 0.9
CDK4-208ENST00000551706 CYP2D6P10635 497 aa20.7■□□□□ 0.9
CDK4-208ENST00000551706 NMIQ13287 307 aaPredicted RBP20.7■□□□□ 0.9
CDK4-208ENST00000551706 RRP1BQ14684 758 aaKnown RBP20.7■□□□□ 0.9
CDK4-208ENST00000551706 CCL15Q16663 113 aa20.7■□□□□ 0.9
CDK4-208ENST00000551706 CERKLQ49MI3 558 aaPredicted RBP20.7■□□□□ 0.9
CDK4-208ENST00000551706 AS3MTQ9HBK9 375 aa20.7■□□□□ 0.9
CDK4-208ENST00000551706 PPP4R2Q9NY27 417 aa20.7■□□□□ 0.9
CDK4-208ENST00000551706 USP17L5A8MUK1 530 aa20.69■□□□□ 0.9
CDK4-208ENST00000551706 SHMT1P34896 483 aa20.69■□□□□ 0.9
CDK4-208ENST00000551706 IFNL3Q8IZI9 196 aa20.69■□□□□ 0.9
CDK4-208ENST00000551706 BRI3BPQ8WY22 251 aa20.69■□□□□ 0.9
CDK4-208ENST00000551706 DPF3Q92784 378 aa20.69■□□□□ 0.9
CDK4-208ENST00000551706 NAPBQ9H115 298 aa20.69■□□□□ 0.9
CDK4-208ENST00000551706 EPB41L4AQ9HCS5 686 aaPredicted RBP20.69■□□□□ 0.9
CDK4-208ENST00000551706 ZBTB21Q9ULJ3 1066 aa20.69■□□□□ 0.9
CDK4-208ENST00000551706 AFG3L2Q9Y4W6 797 aa20.69■□□□□ 0.9
CDK4-208ENST00000551706 CUL9Q8IWT3 2517 aa20.68■□□□□ 0.9
CDK4-208ENST00000551706 COL6A3P12111 3177 aa20.68■□□□□ 0.9
CDK4-208ENST00000551706 CCDC129Q6ZRS4 1044 aa20.68■□□□□ 0.9
CDK4-208ENST00000551706 C16orf86Q6ZW13 317 aa20.68■□□□□ 0.9
CDK4-208ENST00000551706 ZNF280CQ8ND82 737 aa20.68■□□□□ 0.9
CDK4-208ENST00000551706 ZCCHC17Q9NP64 241 aaKnown RBP20.68■□□□□ 0.9
CDK4-208ENST00000551706 CABP5Q9NP86 173 aa20.68■□□□□ 0.9
CDK4-208ENST00000551706 DOCK1Q14185 1865 aa20.68■□□□□ 0.9
CDK4-208ENST00000551706 CYP2D7A0A087X1C5 515 aa20.67■□□□□ 0.9
CDK4-208ENST00000551706 GDF11O95390 407 aa20.67■□□□□ 0.9
CDK4-208ENST00000551706 ABCB5Q2M3G0 1257 aa20.67■□□□□ 0.9
CDK4-208ENST00000551706 FASTKD5Q7L8L6 764 aaKnown RBP20.67■□□□□ 0.9
CDK4-208ENST00000551706 CCDC171Q6TFL3 1326 aa20.67■□□□□ 0.9
CDK4-208ENST00000551706 A0A0G2JLL6 359 aaPredicted RBP20.66■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms