RNA–Protein interactions for RNA: ENST00000550893.2

SCAF11-214, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 507 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-214ENST00000550893 CDPF1Q6NVV7 123 aa7.53□□□□□ -1.2
SCAF11-214ENST00000550893 SND1Q7KZF4 910 aaKnown RBP eCLIP7.53□□□□□ -1.2
SCAF11-214ENST00000550893 OSBPL7Q9BZF2 842 aa7.53□□□□□ -1.2
SCAF11-214ENST00000550893 RAD18Q9NS91 495 aa7.53□□□□□ -1.2
SCAF11-214ENST00000550893 GPN3Q9UHW5 284 aaPredicted RBP7.53□□□□□ -1.2
SCAF11-214ENST00000550893 AKAP2Q9Y2D5 859 aa7.53□□□□□ -1.2
SCAF11-214ENST00000550893 ZNF335Q9H4Z2 1342 aaPredicted RBP7.52□□□□□ -1.2
SCAF11-214ENST00000550893 SCAF11Q99590 1463 aaKnown RBP7.52□□□□□ -1.21
SCAF11-214ENST00000550893 USP11P51784 963 aa7.52□□□□□ -1.21
SCAF11-214ENST00000550893 LRP8Q14114 963 aa7.52□□□□□ -1.21
SCAF11-214ENST00000550893 PDE3AQ14432 1141 aa7.52□□□□□ -1.21
SCAF11-214ENST00000550893 C3orf58Q8NDZ4 430 aa7.52□□□□□ -1.21
SCAF11-214ENST00000550893 FBLIM1Q8WUP2 373 aa7.52□□□□□ -1.21
SCAF11-214ENST00000550893 DBNDD2Q9BQY9 259 aa7.52□□□□□ -1.21
SCAF11-214ENST00000550893 ZC3H12CQ9C0D7 883 aaKnown RBP7.52□□□□□ -1.21
SCAF11-214ENST00000550893 ZFP64Q9NPA5 681 aa7.52□□□□□ -1.21
SCAF11-214ENST00000550893 TMEM39AQ9NV64 488 aa7.52□□□□□ -1.21
SCAF11-214ENST00000550893 XRN1Q8IZH2 1706 aaKnown RBP7.52□□□□□ -1.21
SCAF11-214ENST00000550893 TRPM2O94759 1503 aa7.52□□□□□ -1.21
SCAF11-214ENST00000550893 HYAL3O43820 417 aaPredicted RBP7.51□□□□□ -1.21
SCAF11-214ENST00000550893 AOC2O75106 756 aa7.51□□□□□ -1.21
SCAF11-214ENST00000550893 TSPY4P0CV99 314 aa7.51□□□□□ -1.21
SCAF11-214ENST00000550893 TSPY10P0CW01 314 aa7.51□□□□□ -1.21
SCAF11-214ENST00000550893 ATP2B2Q01814 1243 aa7.51□□□□□ -1.21
SCAF11-214ENST00000550893 ZDHHC13Q8IUH4 622 aa7.51□□□□□ -1.21
SCAF11-214ENST00000550893 WDR18Q9BV38 432 aa7.51□□□□□ -1.21
SCAF11-214ENST00000550893 CCDC86Q9H6F5 360 aaKnown RBP7.51□□□□□ -1.21
SCAF11-214ENST00000550893 ACTL7BQ9Y614 415 aa7.51□□□□□ -1.21
SCAF11-214ENST00000550893 LRRC7Q96NW7 1537 aa7.51□□□□□ -1.21
SCAF11-214ENST00000550893 NPHP4O75161 1426 aaPredicted RBP7.51□□□□□ -1.21
SCAF11-214ENST00000550893 PPLO60437 1756 aa7.51□□□□□ -1.21
SCAF11-214ENST00000550893 WASHC2CQ9Y4E1 1318 aa7.51□□□□□ -1.21
SCAF11-214ENST00000550893 TGFB1P01137 390 aa7.5□□□□□ -1.21
SCAF11-214ENST00000550893 LDHBP07195 334 aaKnown RBP7.5□□□□□ -1.21
SCAF11-214ENST00000550893 LIG1P18858 919 aa7.5□□□□□ -1.21
SCAF11-214ENST00000550893 PPP2R3AQ06190 1150 aa7.5□□□□□ -1.21
SCAF11-214ENST00000550893 NFKBIBQ15653 356 aa7.5□□□□□ -1.21
SCAF11-214ENST00000550893 DYMQ7RTS9 669 aa7.5□□□□□ -1.21
SCAF11-214ENST00000550893 STK35Q8TDR2 534 aa7.5□□□□□ -1.21
SCAF11-214ENST00000550893 WDR89Q96FK6 387 aaPredicted RBP7.5□□□□□ -1.21
SCAF11-214ENST00000550893 NEXMIFQ5QGS0 1516 aa7.5□□□□□ -1.21
SCAF11-214ENST00000550893 HFM1A2PYH4 1435 aa7.5□□□□□ -1.21
SCAF11-214ENST00000550893 CPS1P31327 1500 aa7.49□□□□□ -1.21
SCAF11-214ENST00000550893 FAM95CA0A1B0GW59 222 aa7.49□□□□□ -1.21
SCAF11-214ENST00000550893 BTBD11A6QL63 1104 aa7.49□□□□□ -1.21
SCAF11-214ENST00000550893 GSTP1P09211 210 aaKnown RBP7.49□□□□□ -1.21
SCAF11-214ENST00000550893 LTKP29376 864 aa7.49□□□□□ -1.21
SCAF11-214ENST00000550893 GSTT1P30711 240 aa7.49□□□□□ -1.21
SCAF11-214ENST00000550893 LCE3BQ5TA77 95 aa7.49□□□□□ -1.21
SCAF11-214ENST00000550893 SHKBP1Q8TBC3 707 aa7.49□□□□□ -1.21
SCAF11-214ENST00000550893 FBXO41Q8TF61 875 aa7.49□□□□□ -1.21
SCAF11-214ENST00000550893 EZH1Q92800 747 aaPredicted RBP7.49□□□□□ -1.21
SCAF11-214ENST00000550893 MFSD14AQ96MC6 490 aa7.49□□□□□ -1.21
SCAF11-214ENST00000550893 SRCIN1Q9C0H9 1055 aa7.49□□□□□ -1.21
SCAF11-214ENST00000550893 PPP1R9AQ9ULJ8 1098 aa7.49□□□□□ -1.21
SCAF11-214ENST00000550893 AP4E1Q9UPM8 1137 aa7.49□□□□□ -1.21
SCAF11-214ENST00000550893 TMEM2Q9UHN6 1383 aa7.48□□□□□ -1.21
SCAF11-214ENST00000550893 PRR19A6NJB7 356 aa7.48□□□□□ -1.21
SCAF11-214ENST00000550893 GIPC1O14908 333 aa7.48□□□□□ -1.21
SCAF11-214ENST00000550893 ZNF862O60290 1169 aa7.48□□□□□ -1.21
SCAF11-214ENST00000550893 SSTR4P31391 388 aa7.48□□□□□ -1.21
SCAF11-214ENST00000550893 PAOXQ6QHF9 649 aa7.48□□□□□ -1.21
SCAF11-214ENST00000550893 ADAMTS13Q76LX8 1427 aa7.48□□□□□ -1.21
SCAF11-214ENST00000550893 PDZD3Q86UT5 571 aa7.48□□□□□ -1.21
SCAF11-214ENST00000550893 SULF2Q8IWU5 870 aa7.48□□□□□ -1.21
SCAF11-214ENST00000550893 GSX1Q9H4S2 264 aaPredicted RBP7.48□□□□□ -1.21
SCAF11-214ENST00000550893 FAM105AQ9NUU6 356 aa7.48□□□□□ -1.21
SCAF11-214ENST00000550893 SETBP1Q9Y6X0 1596 aa7.48□□□□□ -1.21
SCAF11-214ENST00000550893 SYNGAP1Q96PV0 1343 aa7.48□□□□□ -1.21
SCAF11-214ENST00000550893 KIF1BO60333 1816 aa7.48□□□□□ -1.21
SCAF11-214ENST00000550893 ASXL1Q8IXJ9 1541 aa7.47□□□□□ -1.21
SCAF11-214ENST00000550893 ANKRD33BA6NCL7 494 aa7.47□□□□□ -1.21
SCAF11-214ENST00000550893 WDR64B1ANS9 1081 aa7.47□□□□□ -1.21
SCAF11-214ENST00000550893 RAB6AP20340 208 aa7.47□□□□□ -1.21
SCAF11-214ENST00000550893 ASPAP45381 313 aa7.47□□□□□ -1.21
SCAF11-214ENST00000550893 FAM50AQ14320 339 aaKnown RBP7.47□□□□□ -1.21
SCAF11-214ENST00000550893 TPTE2Q6XPS3 522 aa7.47□□□□□ -1.21
SCAF11-214ENST00000550893 NBPF11Q86T75 865 aa7.47□□□□□ -1.21
SCAF11-214ENST00000550893 SHISA5Q8N114 240 aa7.47□□□□□ -1.21
SCAF11-214ENST00000550893 FBXL6Q8N531 539 aa7.47□□□□□ -1.21
SCAF11-214ENST00000550893 KCNB2Q92953 911 aa7.47□□□□□ -1.21
SCAF11-214ENST00000550893 NECAB3Q96P71 396 aaPredicted RBP7.47□□□□□ -1.21
SCAF11-214ENST00000550893 YIPF2Q9BWQ6 316 aa7.47□□□□□ -1.21
SCAF11-214ENST00000550893 C12orf49Q9H741 205 aa7.47□□□□□ -1.21
SCAF11-214ENST00000550893 SPG7Q9UQ90 795 aa7.47□□□□□ -1.21
SCAF11-214ENST00000550893 NALCNQ8IZF0 1738 aa7.47□□□□□ -1.21
SCAF11-214ENST00000550893 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP7.46□□□□□ -1.22
SCAF11-214ENST00000550893 TMPRSS2O15393 492 aa7.46□□□□□ -1.22
SCAF11-214ENST00000550893 FBXO24O75426 580 aa7.46□□□□□ -1.22
SCAF11-214ENST00000550893 MED26O95402 600 aa7.46□□□□□ -1.22
SCAF11-214ENST00000550893 NFICP08651 508 aa7.46□□□□□ -1.22
SCAF11-214ENST00000550893 NME2P22392 152 aa7.46□□□□□ -1.22
SCAF11-214ENST00000550893 ARNTP27540 789 aa7.46□□□□□ -1.22
SCAF11-214ENST00000550893 CD97P48960 835 aa7.46□□□□□ -1.22
SCAF11-214ENST00000550893 IDI1Q13907 227 aa7.46□□□□□ -1.22
SCAF11-214ENST00000550893 KIF4BQ2VIQ3 1234 aa7.46□□□□□ -1.22
SCAF11-214ENST00000550893 SEMA6CQ9H3T2 930 aa7.46□□□□□ -1.22
SCAF11-214ENST00000550893 ACSS3Q9H6R3 686 aa7.46□□□□□ -1.22
SCAF11-214ENST00000550893 KRT82Q9NSB4 513 aa7.46□□□□□ -1.22
SCAF11-214ENST00000550893 PPM1HQ9ULR3 514 aa7.46□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms