RNA–Protein interactions for RNA: ENST00000549243.5

SLC48A1-207, Transcript of solute carrier family 48 member 1, humanhuman

TSL 3

Gene SLC48A1, Length 577 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC48A1-207ENST00000549243 PNMA3Q9UL41 463 aa23.75■■□□□ 1.39
SLC48A1-207ENST00000549243 MAGEB6P1A0A0J9YX57 407 aa23.74■■□□□ 1.39
SLC48A1-207ENST00000549243 PPIL4Q8WUA2 492 aaKnown RBP eCLIP23.74■■□□□ 1.39
SLC48A1-207ENST00000549243 RIOK1Q9BRS2 568 aaKnown RBP23.74■■□□□ 1.39
SLC48A1-207ENST00000549243 ZBTB21Q9ULJ3 1066 aa23.74■■□□□ 1.39
SLC48A1-207ENST00000549243 GABRQQ9UN88 632 aa23.74■■□□□ 1.39
SLC48A1-207ENST00000549243 MYH7P12883 1935 aa23.74■■□□□ 1.39
SLC48A1-207ENST00000549243 DDX60LQ5H9U9 1706 aaKnown RBP23.73■■□□□ 1.39
SLC48A1-207ENST00000549243 GRK4P32298 578 aa23.73■■□□□ 1.39
SLC48A1-207ENST00000549243 SH3D19Q5HYK7 790 aa23.73■■□□□ 1.39
SLC48A1-207ENST00000549243 WDR18Q9BV38 432 aa23.73■■□□□ 1.39
SLC48A1-207ENST00000549243 BOLA2Q9H3K6 86 aa23.73■■□□□ 1.39
SLC48A1-207ENST00000549243 ZNF532Q9HCE3 1301 aa23.73■■□□□ 1.39
SLC48A1-207ENST00000549243 TNPO2O14787 897 aaKnown RBP23.72■■□□□ 1.39
SLC48A1-207ENST00000549243 SMARCA5O60264 1052 aaPredicted RBP23.72■■□□□ 1.39
SLC48A1-207ENST00000549243 PABPC4Q13310 644 aaKnown RBP eCLIP23.72■■□□□ 1.39
SLC48A1-207ENST00000549243 MTFR1Q15390 333 aa23.72■■□□□ 1.39
SLC48A1-207ENST00000549243 PRPF38BQ5VTL8 546 aaKnown RBP23.72■■□□□ 1.39
SLC48A1-207ENST00000549243 TMED8Q6PL24 325 aaPredicted RBP23.72■■□□□ 1.39
SLC48A1-207ENST00000549243 BACE1P56817 501 aa23.71■■□□□ 1.39
SLC48A1-207ENST00000549243 ASCC2Q9H1I8 757 aaPredicted RBP23.71■■□□□ 1.39
SLC48A1-207ENST00000549243 PAG1Q9NWQ8 432 aa23.71■■□□□ 1.39
SLC48A1-207ENST00000549243 TMOD4Q9NZQ9 345 aa23.71■■□□□ 1.39
SLC48A1-207ENST00000549243 BIN2Q9UBW5 565 aaPredicted RBP23.71■■□□□ 1.39
SLC48A1-207ENST00000549243 SERPINB13Q9UIV8 391 aa23.71■■□□□ 1.39
SLC48A1-207ENST00000549243 GH2P01242 217 aa23.7■■□□□ 1.38
SLC48A1-207ENST00000549243 TTC6Q86TZ1 520 aa23.7■■□□□ 1.38
SLC48A1-207ENST00000549243 LRRCC1Q9C099 1032 aa23.7■■□□□ 1.38
SLC48A1-207ENST00000549243 BAZ2AQ9UIF9 1905 aaKnown RBP23.7■■□□□ 1.38
SLC48A1-207ENST00000549243 MYH8P13535 1937 aa23.69■■□□□ 1.38
SLC48A1-207ENST00000549243 TCRBV5S4A2TA0A5A2 114 aa23.69■■□□□ 1.38
SLC48A1-207ENST00000549243 USP17L10C9JJH3 530 aa23.69■■□□□ 1.38
SLC48A1-207ENST00000549243 FLT3LGP49771 235 aa23.69■■□□□ 1.38
SLC48A1-207ENST00000549243 FAM110CQ1W6H9 321 aa23.69■■□□□ 1.38
SLC48A1-207ENST00000549243 SLFNL1Q499Z3 407 aa23.69■■□□□ 1.38
SLC48A1-207ENST00000549243 CRNKL1Q9BZJ0 848 aaKnown RBP23.69■■□□□ 1.38
SLC48A1-207ENST00000549243 EHD4Q9H223 541 aa23.69■■□□□ 1.38
SLC48A1-207ENST00000549243 GINM1Q9NU53 330 aa23.69■■□□□ 1.38
SLC48A1-207ENST00000549243 POLR3DP05423 398 aaPredicted RBP23.68■■□□□ 1.38
SLC48A1-207ENST00000549243 ATP5JP18859 108 aa23.68■■□□□ 1.38
SLC48A1-207ENST00000549243 PLCD1P51178 756 aa23.68■■□□□ 1.38
SLC48A1-207ENST00000549243 IRX3P78415 501 aaPredicted RBP23.68■■□□□ 1.38
SLC48A1-207ENST00000549243 TATDN1Q6P1N9 297 aa23.68■■□□□ 1.38
SLC48A1-207ENST00000549243 LCORLQ8N3X6 602 aa23.68■■□□□ 1.38
SLC48A1-207ENST00000549243 TAOK2Q9UL54 1235 aa23.68■■□□□ 1.38
SLC48A1-207ENST00000549243 C19orf81C9J6K1 198 aa23.67■■□□□ 1.38
SLC48A1-207ENST00000549243 ADCY3O60266 1144 aa23.67■■□□□ 1.38
SLC48A1-207ENST00000549243 ELNP15502 786 aa23.67■■□□□ 1.38
SLC48A1-207ENST00000549243 GCLCP48506 637 aaPredicted RBP23.67■■□□□ 1.38
SLC48A1-207ENST00000549243 EVX2Q03828 476 aa23.67■■□□□ 1.38
SLC48A1-207ENST00000549243 ZYXQ15942 572 aaKnown RBP23.67■■□□□ 1.38
SLC48A1-207ENST00000549243 SDR42E1Q8WUS8 393 aa23.67■■□□□ 1.38
SLC48A1-207ENST00000549243 HAUS7Q99871 368 aa23.67■■□□□ 1.38
SLC48A1-207ENST00000549243 ARMT1Q9H993 441 aa23.67■■□□□ 1.38
SLC48A1-207ENST00000549243 MCM9Q9NXL9 1143 aa23.67■■□□□ 1.38
SLC48A1-207ENST00000549243 CCL5P13501 91 aa23.66■■□□□ 1.38
SLC48A1-207ENST00000549243 RAB3GAP1Q15042 981 aa23.66■■□□□ 1.38
SLC48A1-207ENST00000549243 CERKLQ49MI3 558 aaPredicted RBP23.66■■□□□ 1.38
SLC48A1-207ENST00000549243 SLAIN1Q8ND83 568 aa23.66■■□□□ 1.38
SLC48A1-207ENST00000549243 COA7Q96BR5 231 aa23.66■■□□□ 1.38
SLC48A1-207ENST00000549243 PEX10O60683 326 aa23.65■■□□□ 1.38
SLC48A1-207ENST00000549243 CHGBP05060 677 aa23.65■■□□□ 1.38
SLC48A1-207ENST00000549243 SHMT1P34896 483 aa23.65■■□□□ 1.38
SLC48A1-207ENST00000549243 UBXN2AP68543 259 aa23.65■■□□□ 1.38
SLC48A1-207ENST00000549243 ABCB5Q2M3G0 1257 aa23.65■■□□□ 1.38
SLC48A1-207ENST00000549243 P2RX7Q99572 595 aaKnown RBP23.65■■□□□ 1.38
SLC48A1-207ENST00000549243 FEZ1Q99689 392 aa23.65■■□□□ 1.38
SLC48A1-207ENST00000549243 EMILIN3Q9NT22 766 aa23.65■■□□□ 1.38
SLC48A1-207ENST00000549243 MBD4O95243 580 aa23.64■■□□□ 1.37
SLC48A1-207ENST00000549243 HOXA7P31268 230 aaPredicted RBP23.64■■□□□ 1.37
SLC48A1-207ENST00000549243 ADD2P35612 726 aa23.64■■□□□ 1.37
SLC48A1-207ENST00000549243 DDX24Q9GZR7 859 aaKnown RBP eCLIP23.64■■□□□ 1.37
SLC48A1-207ENST00000549243 RNF208Q9H0X6 261 aa23.64■■□□□ 1.37
SLC48A1-207ENST00000549243 PRKAB2O43741 272 aa23.63■■□□□ 1.37
SLC48A1-207ENST00000549243 CYP2D6P10635 497 aa23.63■■□□□ 1.37
SLC48A1-207ENST00000549243 USP17L2Q6R6M4 530 aa23.63■■□□□ 1.37
SLC48A1-207ENST00000549243 SHISA4Q96DD7 197 aa23.63■■□□□ 1.37
SLC48A1-207ENST00000549243 CABP5Q9NP86 173 aa23.63■■□□□ 1.37
SLC48A1-207ENST00000549243 DCP1AQ9NPI6 582 aaPredicted RBP23.63■■□□□ 1.37
SLC48A1-207ENST00000549243 PLXNB2O15031 1838 aa23.63■■□□□ 1.37
SLC48A1-207ENST00000549243 HERVK_113P62684 666 aa23.62■■□□□ 1.37
SLC48A1-207ENST00000549243 UNC93B1Q9H1C4 597 aa23.62■■□□□ 1.37
SLC48A1-207ENST00000549243 INHAP05111 366 aa23.61■■□□□ 1.37
SLC48A1-207ENST00000549243 IRF5Q13568 498 aa23.61■■□□□ 1.37
SLC48A1-207ENST00000549243 ACER1Q8TDN7 264 aa23.61■■□□□ 1.37
SLC48A1-207ENST00000549243 DCTPP1Q9H773 170 aa23.61■■□□□ 1.37
SLC48A1-207ENST00000549243 TXNRD2Q9NNW7 524 aa23.61■■□□□ 1.37
SLC48A1-207ENST00000549243 MORF4L1Q9UBU8 362 aa23.61■■□□□ 1.37
SLC48A1-207ENST00000549243 CEP290O15078 2479 aa23.6■■□□□ 1.37
SLC48A1-207ENST00000549243 MPHOSPH10O00566 681 aaKnown RBP23.6■■□□□ 1.37
SLC48A1-207ENST00000549243 GJB1P08034 283 aa23.6■■□□□ 1.37
SLC48A1-207ENST00000549243 GABPAQ06546 454 aa23.6■■□□□ 1.37
SLC48A1-207ENST00000549243 SEPT2Q15019 361 aa23.6■■□□□ 1.37
SLC48A1-207ENST00000549243 SLC44A5Q8NCS7 719 aa23.6■■□□□ 1.37
SLC48A1-207ENST00000549243 PXYLP1Q8TE99 480 aa23.6■■□□□ 1.37
SLC48A1-207ENST00000549243 PAGR1Q9BTK6 254 aa23.6■■□□□ 1.37
SLC48A1-207ENST00000549243 ECHDC1Q9NTX5 307 aa23.6■■□□□ 1.37
SLC48A1-207ENST00000549243 GUCY1A2P33402 732 aa23.59■■□□□ 1.37
SLC48A1-207ENST00000549243 TSHZ3Q63HK5 1081 aa23.59■■□□□ 1.37
SLC48A1-207ENST00000549243 NKX2-3Q8TAU0 364 aa23.59■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms