RNA–Protein interactions for RNA: ENST00000543604.1

AC053513.1-201, humanhuman

TSL 3 BASIC

Gene AC053513.1, Length 738 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC053513.1-201ENST00000543604 OTOP1Q7RTM1 612 aa10.28□□□□□ -0.76
AC053513.1-201ENST00000543604 ERO1AQ96HE7 468 aa10.28□□□□□ -0.76
AC053513.1-201ENST00000543604 R3HDMLQ9H3Y0 253 aa10.28□□□□□ -0.76
AC053513.1-201ENST00000543604 SZT2Q5T011 3432 aa10.27□□□□□ -0.76
AC053513.1-201ENST00000543604 RANBP2P49792 3224 aaKnown RBP10.27□□□□□ -0.77
AC053513.1-201ENST00000543604 UNCXA6NJT0 531 aa10.27□□□□□ -0.77
AC053513.1-201ENST00000543604 PPP1R12BO60237 982 aaPredicted RBP10.27□□□□□ -0.77
AC053513.1-201ENST00000543604 PRKG1Q13976 671 aa10.27□□□□□ -0.77
AC053513.1-201ENST00000543604 CCDC85AQ96PX6 553 aaPredicted RBP10.27□□□□□ -0.77
AC053513.1-201ENST00000543604 CHMP4AQ9BY43 222 aa10.27□□□□□ -0.77
AC053513.1-201ENST00000543604 COA1Q9GZY4 146 aa10.27□□□□□ -0.77
AC053513.1-201ENST00000543604 BSDC1Q9NW68 430 aaPredicted RBP10.27□□□□□ -0.77
AC053513.1-201ENST00000543604 CWC25Q9NXE8 425 aaPredicted RBP10.27□□□□□ -0.77
AC053513.1-201ENST00000543604 ANGEL1Q9UNK9 670 aaKnown RBP10.27□□□□□ -0.77
AC053513.1-201ENST00000543604 MED23Q9ULK4 1368 aa10.26□□□□□ -0.77
AC053513.1-201ENST00000543604 LAMB2P55268 1798 aa10.26□□□□□ -0.77
AC053513.1-201ENST00000543604 POLR2AP24928 1970 aaKnown RBP10.26□□□□□ -0.77
AC053513.1-201ENST00000543604 SASH1O94885 1247 aa10.26□□□□□ -0.77
AC053513.1-201ENST00000543604 FXR1P51114 621 aaKnown RBP eCLIP10.26□□□□□ -0.77
AC053513.1-201ENST00000543604 ARHGEF6Q15052 776 aa10.26□□□□□ -0.77
AC053513.1-201ENST00000543604 FOXD4L5Q5VV16 416 aaPredicted RBP10.26□□□□□ -0.77
AC053513.1-201ENST00000543604 DUSP27Q5VZP5 1158 aa10.26□□□□□ -0.77
AC053513.1-201ENST00000543604 TTLL5Q6EMB2 1281 aa10.26□□□□□ -0.77
AC053513.1-201ENST00000543604 RNF217Q8TC41 542 aa10.26□□□□□ -0.77
AC053513.1-201ENST00000543604 ARMC5Q96C12 935 aa10.26□□□□□ -0.77
AC053513.1-201ENST00000543604 MYD88Q99836 296 aa10.26□□□□□ -0.77
AC053513.1-201ENST00000543604 DEFB129Q9H1M3 183 aa10.26□□□□□ -0.77
AC053513.1-201ENST00000543604 PTPN22Q9Y2R2 807 aa10.26□□□□□ -0.77
AC053513.1-201ENST00000543604 DDX60Q8IY21 1712 aaKnown RBP10.25□□□□□ -0.77
AC053513.1-201ENST00000543604 DDX58O95786 925 aaKnown RBP10.25□□□□□ -0.77
AC053513.1-201ENST00000543604 CCT4P50991 539 aaKnown RBP10.25□□□□□ -0.77
AC053513.1-201ENST00000543604 TSGA10IPQ3SY00 556 aa10.25□□□□□ -0.77
AC053513.1-201ENST00000543604 SUPT20HL1Q3ZLR7 823 aa10.25□□□□□ -0.77
AC053513.1-201ENST00000543604 NBPF11Q86T75 865 aa10.25□□□□□ -0.77
AC053513.1-201ENST00000543604 MXD3Q9BW11 206 aa10.25□□□□□ -0.77
AC053513.1-201ENST00000543604 EFCC1Q9HA90 598 aa10.25□□□□□ -0.77
AC053513.1-201ENST00000543604 MINPP1Q9UNW1 487 aa10.25□□□□□ -0.77
AC053513.1-201ENST00000543604 LEMD3Q9Y2U8 911 aa10.25□□□□□ -0.77
AC053513.1-201ENST00000543604 PPP2R3BQ9Y5P8 575 aa10.25□□□□□ -0.77
AC053513.1-201ENST00000543604 TAF1P21675 1872 aa10.24□□□□□ -0.77
AC053513.1-201ENST00000543604 MYO1BO43795 1136 aa10.24□□□□□ -0.77
AC053513.1-201ENST00000543604 EN2P19622 333 aaPredicted RBP10.24□□□□□ -0.77
AC053513.1-201ENST00000543604 CTSWP56202 376 aa10.24□□□□□ -0.77
AC053513.1-201ENST00000543604 DLGAP5Q15398 846 aa10.24□□□□□ -0.77
AC053513.1-201ENST00000543604 MAP3K11Q16584 847 aa10.24□□□□□ -0.77
AC053513.1-201ENST00000543604 KIAA0825Q8IV33 1275 aa10.24□□□□□ -0.77
AC053513.1-201ENST00000543604 COG6Q9Y2V7 657 aa10.24□□□□□ -0.77
AC053513.1-201ENST00000543604 KIAA0100Q14667 2235 aaKnown RBP10.23□□□□□ -0.77
AC053513.1-201ENST00000543604 DLG5Q8TDM6 1919 aa10.23□□□□□ -0.77
AC053513.1-201ENST00000543604 SCN9AQ15858 1988 aa10.23□□□□□ -0.77
AC053513.1-201ENST00000543604 IGF2BP3O00425 579 aaKnown RBP eCLIP10.23□□□□□ -0.77
AC053513.1-201ENST00000543604 IREB2P48200 963 aaKnown RBP10.23□□□□□ -0.77
AC053513.1-201ENST00000543604 SP3Q02447 781 aa10.23□□□□□ -0.77
AC053513.1-201ENST00000543604 CRHR2Q13324 411 aa10.23□□□□□ -0.77
AC053513.1-201ENST00000543604 RALBP1Q15311 655 aa10.23□□□□□ -0.77
AC053513.1-201ENST00000543604 WNK4Q96J92 1243 aa10.23□□□□□ -0.77
AC053513.1-201ENST00000543604 METTL22Q9BUU2 404 aaPredicted RBP10.23□□□□□ -0.77
AC053513.1-201ENST00000543604 ANKRD2Q9GZV1 360 aa10.23□□□□□ -0.77
AC053513.1-201ENST00000543604 OSBPL3Q9H4L5 887 aa10.23□□□□□ -0.77
AC053513.1-201ENST00000543604 PHAXQ9H814 394 aaKnown RBP10.23□□□□□ -0.77
AC053513.1-201ENST00000543604 COL1A1P02452 1464 aaPredicted RBP10.23□□□□□ -0.77
AC053513.1-201ENST00000543604 CEP290O15078 2479 aa10.22□□□□□ -0.77
AC053513.1-201ENST00000543604 A0A1W2PRU2 124 aa10.22□□□□□ -0.77
AC053513.1-201ENST00000543604 WTIPA6NIX2 430 aaPredicted RBP10.22□□□□□ -0.77
AC053513.1-201ENST00000543604 MEN1O00255 615 aa10.22□□□□□ -0.77
AC053513.1-201ENST00000543604 IGHMBP2P38935 993 aaKnown RBP10.22□□□□□ -0.77
AC053513.1-201ENST00000543604 GTF2IP78347 998 aa10.22□□□□□ -0.77
AC053513.1-201ENST00000543604 SLC9C1Q4G0N8 1177 aa10.22□□□□□ -0.77
AC053513.1-201ENST00000543604 CCDC146Q8IYE0 955 aa10.22□□□□□ -0.77
AC053513.1-201ENST00000543604 PHTF2Q8N3S3 785 aa10.22□□□□□ -0.77
AC053513.1-201ENST00000543604 CCDC155Q8N6L0 562 aa10.22□□□□□ -0.77
AC053513.1-201ENST00000543604 TTLL11Q8NHH1 800 aa10.22□□□□□ -0.77
AC053513.1-201ENST00000543604 CD99L2Q8TCZ2 262 aa10.22□□□□□ -0.77
AC053513.1-201ENST00000543604 JARID2Q92833 1246 aaPredicted RBP10.22□□□□□ -0.77
AC053513.1-201ENST00000543604 RUNDC1Q96C34 613 aa10.22□□□□□ -0.77
AC053513.1-201ENST00000543604 POM121Q96HA1 1249 aa10.22□□□□□ -0.77
AC053513.1-201ENST00000543604 ZBED3Q96IU2 234 aaPredicted RBP10.22□□□□□ -0.77
AC053513.1-201ENST00000543604 CLMNQ96JQ2 1002 aa10.22□□□□□ -0.77
AC053513.1-201ENST00000543604 GREM2Q9H772 168 aa10.22□□□□□ -0.77
AC053513.1-201ENST00000543604 ZNF804BA4D1E1 1349 aa10.22□□□□□ -0.77
AC053513.1-201ENST00000543604 COL4A1P02462 1669 aa10.22□□□□□ -0.77
AC053513.1-201ENST00000543604 SLC35F4A4IF30 521 aa10.21□□□□□ -0.77
AC053513.1-201ENST00000543604 WDHD1O75717 1129 aaPredicted RBP10.21□□□□□ -0.77
AC053513.1-201ENST00000543604 KCNJ4P48050 445 aa10.21□□□□□ -0.77
AC053513.1-201ENST00000543604 CALD1Q05682 793 aaKnown RBP10.21□□□□□ -0.77
AC053513.1-201ENST00000543604 NEXNQ0ZGT2 675 aa10.21□□□□□ -0.77
AC053513.1-201ENST00000543604 WDR43Q15061 677 aaKnown RBP eCLIP10.21□□□□□ -0.77
AC053513.1-201ENST00000543604 SLC4A8Q2Y0W8 1093 aa10.21□□□□□ -0.77
AC053513.1-201ENST00000543604 PRICKLE2Q7Z3G6 844 aa10.21□□□□□ -0.77
AC053513.1-201ENST00000543604 TXNRD3Q86VQ6 643 aa10.21□□□□□ -0.77
AC053513.1-201ENST00000543604 ANKRD13AQ8IZ07 590 aa10.21□□□□□ -0.77
AC053513.1-201ENST00000543604 ZNF333Q96JL9 665 aa10.21□□□□□ -0.77
AC053513.1-201ENST00000543604 MPHOSPH8Q99549 860 aa10.21□□□□□ -0.77
AC053513.1-201ENST00000543604 MBIPQ9NS73 344 aa10.21□□□□□ -0.77
AC053513.1-201ENST00000543604 FZD1Q9UP38 647 aa10.21□□□□□ -0.77
AC053513.1-201ENST00000543604 TRAK2O60296 914 aa10.2□□□□□ -0.78
AC053513.1-201ENST00000543604 VSIG8P0DPA2 414 aa10.2□□□□□ -0.78
AC053513.1-201ENST00000543604 INSM1Q01101 510 aaPredicted RBP10.2□□□□□ -0.78
AC053513.1-201ENST00000543604 CCDC30Q5VVM6 783 aa10.2□□□□□ -0.78
AC053513.1-201ENST00000543604 CYP2U1Q7Z449 544 aa10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms